CuGenDBv2

Gene ID	Sed0003497
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG10:4112178..4112465
RNA-Seq Expression	Sed0003497
Synteny	Sed0003497
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6594656.1 hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia]

8.1e-18

57.14

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV
        P+AIGT+G+MGSLVMKEIEYFT+L+LERHG        ++  ++SKT FW+L   +W  KKR   N    NICS AVE SKSNRFN      YRILK DV
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV

Query:  NHFRI
         HF I
Subjt:  NHFRI

XP_022142335.1 uncharacterized protein LOC111012477 [Momordica charantia]

2.6e-16

53.77

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFT-NWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQD
        P+AIGT+G++GSLVMKEIEYFT+L+LERHG        ++   +SK  FW+L  T  W  ++   TN    NICS AVE SKSNRFN      YRILK+D
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFT-NWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQD

Query:  VNHFRI
        VN+F I
Subjt:  VNHFRI

XP_022926407.1 uncharacterized protein LOC111433571 [Cucurbita moschata]

8.1e-18

57.14

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV
        P+AIGT+G+MGSLVMKEIEYFT+L+LERHG        ++  ++SKT FW+L   +W  KKR   N    NICS AVE SKSNRFN      YRILK DV
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV

Query:  NHFRI
         HF I
Subjt:  NHFRI

XP_023003961.1 uncharacterized protein LOC111497407 [Cucurbita maxima]

2.4e-17

55.24

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV
        P+AIGT+G+MGSLVMKEIEYFT+L+LERHG        ++  ++S+T FW+L   +W  KKR   N    NICS AVE SKSNRFN      YRILK D+
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV

Query:  NHFRI
         HF I
Subjt:  NHFRI

XP_023518155.1 uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo]

8.1e-18

57.14

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV
        P+AIGT+G+MGSLVMKEIEYFT+L+LERHG        ++  ++SKT FW+L   +W  KKR   N    NICS AVE SKSNRFN      YRILK DV
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV

Query:  NHFRI
         HF I
Subjt:  NHFRI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B3D8 uncharacterized protein LOC103485325

1.1e-15

56.12

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHGSTTS--------NNSKTGFWVLFFTNWSCKKRSRTNNI---CSVAVEFSKSNRFN------YRILKQD
        P+AIGT+G++GSLVMKEIEYFT L+LERHGS+ +        ++SK  FW+L  T W  KKR   N I    S AVEFSKSNRFN      YRILK D
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHGSTTS--------NNSKTGFWVLFFTNWSCKKRSRTNNI---CSVAVEFSKSNRFN------YRILKQD

A0A5D3CRM5 Uncharacterized protein

1.1e-15

56.12

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHGSTTS--------NNSKTGFWVLFFTNWSCKKRSRTNNI---CSVAVEFSKSNRFN------YRILKQD
        P+AIGT+G++GSLVMKEIEYFT L+LERHGS+ +        ++SK  FW+L  T W  KKR   N I    S AVEFSKSNRFN      YRILK D
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHGSTTS--------NNSKTGFWVLFFTNWSCKKRSRTNNI---CSVAVEFSKSNRFN------YRILKQD

A0A6J1CKN5 uncharacterized protein LOC111012477

1.3e-16

53.77

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFT-NWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQD
        P+AIGT+G++GSLVMKEIEYFT+L+LERHG        ++   +SK  FW+L  T  W  ++   TN    NICS AVE SKSNRFN      YRILK+D
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFT-NWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQD

Query:  VNHFRI
        VN+F I
Subjt:  VNHFRI

A0A6J1EEE9 uncharacterized protein LOC111433571

3.9e-18

57.14

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV
        P+AIGT+G+MGSLVMKEIEYFT+L+LERHG        ++  ++SKT FW+L   +W  KKR   N    NICS AVE SKSNRFN      YRILK DV
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV

Query:  NHFRI
         HF I
Subjt:  NHFRI

A0A6J1KQQ8 uncharacterized protein LOC111497407

1.1e-17

55.24

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV
        P+AIGT+G+MGSLVMKEIEYFT+L+LERHG        ++  ++S+T FW+L   +W  KKR   N    NICS AVE SKSNRFN      YRILK D+
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDLERHG--------STTSNNSKTGFWVLFFTNWSCKKRSRTN----NICSVAVEFSKSNRFN------YRILKQDV

Query:  NHFRI
         HF I
Subjt:  NHFRI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G21780.1 unknown protein

6.2e-08

39.25

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Query:  PVAIGTQGSMGSLVMKEIEYFTRLDL------ERHGSTTSN----------NSKTGFWVLFFTNWSCKKRSRTN-------NICSVAVEFSKSNR---FN
        P+AIGT+G++GSLV KEI+YF            R G++  N          +S+ G W    T W  KKR           ++CS AVE S  NR   FN
Subjt:  PVAIGTQGSMGSLVMKEIEYFTRLDL------ERHGSTTSN----------NSKTGFWVLFFTNWSCKKRSRTN-------NICSVAVEFSKSNR---FN

Query:  YRILKQD
        YRILK D
Subjt:  YRILKQD

Sequences

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CDS sequence

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ATGGGCGATTTTGATATTGGTGATCCAGTTGCGATTGGCACGCAAGGCAGTATGGGATCCTTGGTGATGAAGGAAATTGAGTACTTCACAAGGCTTGATCTTGAACGCCA
TGGTTCAACAACAAGTAATAATTCCAAGACAGGTTTTTGGGTTTTGTTCTTCACTAATTGGAGCTGCAAGAAGAGATCAAGAACCAACAATATTTGCTCTGTTGCTGTTG
AATTCTCAAAAAGTAATCGCTTCAATTACAGGATTCTCAAACAAGATGTCAATCACTTTCGCATTTGA

mRNA sequence

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Protein sequence

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MGDFDIGDPVAIGTQGSMGSLVMKEIEYFTRLDLERHGSTTSNNSKTGFWVLFFTNWSCKKRSRTNNICSVAVEFSKSNRFNYRILKQDVNHFRI

Sed0003497 (gene) of Chayote v1 genome