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Sed0003532 (gene) of Chayote v1 genome

Gene IDSed0003532
OrganismSechium edule (Chayote v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationLG10:25418279..25419206
RNA-Seq ExpressionSed0003532
SyntenySed0003532
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1825870.1 unnamed protein product [Ananas comosus var. bracteatus]1.0e-4859.35Show/hide
Query:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH  TK ED KL+ECLL+L+N  QWR DN TFR+GYLQQLE+ M  K+P CE+K  PHIESR KL K+QY+AI EMLGP+ SGFGW+++ KC++C 
Subjt:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE
        K+V+D+W KSH +A GL+ KSFPY +EL I+FGKDRA    AE+P D    I  E
Subjt:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE

XP_020101014.1 uncharacterized protein LOC109718933 isoform X1 [Ananas comosus]1.0e-4859.35Show/hide
Query:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH  TK ED KL+ECLL+L+N  QWR DN TFR+GYLQQLE+ M  K+P CE+K  PHIESR KL K+QY+AI EMLGP+ SGFGW+++ KC++C 
Subjt:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE
        K+V+D+W KSH +A GL+ KSFPY +EL I+FGKDRA    AE+P D    I  E
Subjt:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE

XP_020101017.1 uncharacterized protein LOC109718933 isoform X2 [Ananas comosus]1.0e-4859.35Show/hide
Query:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH  TK ED KL+ECLL+L+N  QWR DN TFR+GYLQQLE+ M  K+P CE+K  PHIESR KL K+QY+AI EMLGP+ SGFGW+++ KC++C 
Subjt:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE
        K+V+D+W KSH +A GL+ KSFPY +EL I+FGKDRA    AE+P D    I  E
Subjt:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE

XP_024022021.1 uncharacterized protein LOC112091787 [Morus notabilis]1.6e-5448.55Show/hide
Query:  KKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDV
        +KH  T  ED KLVECLL++AN  +W+ DN TF+ GYLQQLEKMM  K+PQC +KAQPHI+SRVK+LKKQY AI+EMLGP  SGFGWN+++KC+   KDV
Subjt:  KKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDV

Query:  FDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTETSQ-------MMWDDFSDCYM---PHLH-----------EEKKEKNGH
        FD+W KSH SA+GL+NK FPY DELG++FG DRAN QGA    DM + I+ ET         +M D+  D      P +            + K+ + G 
Subjt:  FDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTETSQ-------MMWDDFSDCYM---PHLH-----------EEKKEKNGH

Query:  KLVEIVATSMDNMNVMYEKTTENIGKIAKYFEAQTIVYERR
         LV+ +   +   + MY    ENIG++A  F+ +     RR
Subjt:  KLVEIVATSMDNMNVMYEKTTENIGKIAKYFEAQTIVYERR

XP_038886815.1 uncharacterized protein LOC120077046 [Benincasa hispida]2.2e-5175.76Show/hide
Query:  LEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAE
        +E+MM+ KL  CEVKAQPHIESRVKLLKKQY AIAEMLGPN SGFGWNER+KC  CSKDVFDDW KSH SA+GL+NKSFPYLDE+ +IFGKDRAN   AE
Subjt:  LEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAE

Query:  APGDMAEKINTETSQMMWDDFSDCYMPHLHEE
         P DMAEKI+ ET+  MWDDFSDCY+ H  EE
Subjt:  APGDMAEKINTETSQMMWDDFSDCYMPHLHEE

TrEMBL top hitse value%identityAlignment
A0A6P5FXE5 uncharacterized protein LOC109718933 isoform X15.0e-4959.35Show/hide
Query:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH  TK ED KL+ECLL+L+N  QWR DN TFR+GYLQQLE+ M  K+P CE+K  PHIESR KL K+QY+AI EMLGP+ SGFGW+++ KC++C 
Subjt:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE
        K+V+D+W KSH +A GL+ KSFPY +EL I+FGKDRA    AE+P D    I  E
Subjt:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE

A0A6P5G5H8 uncharacterized protein LOC109718933 isoform X25.0e-4959.35Show/hide
Query:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH  TK ED KL+ECLL+L+N  QWR DN TFR+GYLQQLE+ M  K+P CE+K  PHIESR KL K+QY+AI EMLGP+ SGFGW+++ KC++C 
Subjt:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE
        K+V+D+W KSH +A GL+ KSFPY +EL I+FGKDRA    AE+P D    I  E
Subjt:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE

A0A6V7P4Z9 Myb_DNA-bind_3 domain-containing protein5.0e-4959.35Show/hide
Query:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH  TK ED KL+ECLL+L+N  QWR DN TFR+GYLQQLE+ M  K+P CE+K  PHIESR KL K+QY+AI EMLGP+ SGFGW+++ KC++C 
Subjt:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE
        K+V+D+W KSH +A GL+ KSFPY +EL I+FGKDRA    AE+P D    I  E
Subjt:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE

A0A6V7PLJ8 Myb_DNA-bind_3 domain-containing protein5.5e-4860Show/hide
Query:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS
        N   KH  TKEED KL+ECLLEL     W+ DN TFR+GYLQQLEK M  +LP C++K  PHIESR KL K+QY+AI+EMLGP  SGFGWN+ EKCI C 
Subjt:  NVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCS

Query:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE
        K VFD W KSH +A GL+ KSFPYL++L ++FGKD A   GAE+  D A  +  E
Subjt:  KDVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTE

A0A803QNC5 Uncharacterized protein1.9e-4843.44Show/hide
Query:  KKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDV
        +KH  T  +D KLVECL+++ N  +W+ DN TF+ GYLQQLEKMM  ++P   +KAQPHI+SR+K+LK+QY+AI++MLGP+ SGFGWNE+ KC+   K V
Subjt:  KKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDV

Query:  FDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGA----EAPGDMAEKINTETSQMMWDDFSDCYMPHLHE--------------------EKKEK
        FD+W KSH +A+GL +K FPY DEL I++GKDRA   GA    E   ++AE+IN       W+D  D + P L E                    ++K  
Subjt:  FDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGA----EAPGDMAEKINTETSQMMWDDFSDCYMPHLHE--------------------EKKEK

Query:  NGHKLVEIVATSMDNMNVMYEKTTENIGKIAKYFEAQTIVYERR
        NG  LVE+++ S+   + M    +++I K+A  F+ +     RR
Subjt:  NGHKLVEIVATSMDNMNVMYEKTTENIGKIAKYFEAQTIVYERR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02210.1 unknown protein5.1e-0628.17Show/hide
Query:  IESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDVFDDWFKSHSSARGLQNKSFPYLDELGIIFG
        +++R K L++Q++AI  +L     GF W+   + +    +V+ D+ K+H  AR    +  PY  +L ++ G
Subjt:  IESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDVFDDWFKSHSSARGLQNKSFPYLDELGIIFG

AT4G02210.2 unknown protein5.1e-0628.17Show/hide
Query:  IESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDVFDDWFKSHSSARGLQNKSFPYLDELGIIFG
        +++R K L++Q++AI  +L     GF W+   + +    +V+ D+ K+H  AR    +  PY  +L ++ G
Subjt:  IESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSKDVFDDWFKSHSSARGLQNKSFPYLDELGIIFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATATAGATCAATGTAGATGGAATGTTAACAAAAAACACGTAAGGACTAAAGAAGAGGACGGCAAGTTGGTTGAATGTCTATTAGAATTAGCAAACCTAAGCCA
ATGGCGATGTGATAATGAAACATTTAGATCGGGCTATCTACAACAATTGGAGAAAATGATGAAGCCAAAGTTGCCTCAATGTGAGGTAAAGGCTCAACCTCACATAGAAT
CAAGGGTAAAACTTTTGAAGAAGCAATATAGTGCAATTGCTGAGATGTTAGGACCAAATTGTAGTGGTTTCGGTTGGAACGAAAGAGAGAAGTGTATTGATTGTTCGAAA
GATGTCTTTGATGATTGGTTTAAGAGTCATTCAAGTGCAAGAGGATTGCAAAACAAGTCATTTCCATACTTAGATGAGTTGGGAATAATATTTGGCAAAGATCGAGCTAA
TGCACAAGGAGCTGAAGCGCCAGGAGATATGGCTGAGAAAATAAACACGGAAACAAGTCAAATGATGTGGGATGACTTTAGTGATTGTTATATGCCACATCTACATGAGG
AGAAAAAGGAAAAAAATGGACATAAATTAGTTGAAATTGTGGCTACATCTATGGATAATATGAATGTGATGTATGAGAAAACAACTGAAAACATCGGTAAGATTGCCAAG
TACTTTGAAGCTCAAACAATTGTTTATGAAAGAAGAAACACTACTACAATTTTAGCTTTCTATGACAATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATATAGATCAATGTAGATGGAATGTTAACAAAAAACACGTAAGGACTAAAGAAGAGGACGGCAAGTTGGTTGAATGTCTATTAGAATTAGCAAACCTAAGCCA
ATGGCGATGTGATAATGAAACATTTAGATCGGGCTATCTACAACAATTGGAGAAAATGATGAAGCCAAAGTTGCCTCAATGTGAGGTAAAGGCTCAACCTCACATAGAAT
CAAGGGTAAAACTTTTGAAGAAGCAATATAGTGCAATTGCTGAGATGTTAGGACCAAATTGTAGTGGTTTCGGTTGGAACGAAAGAGAGAAGTGTATTGATTGTTCGAAA
GATGTCTTTGATGATTGGTTTAAGAGTCATTCAAGTGCAAGAGGATTGCAAAACAAGTCATTTCCATACTTAGATGAGTTGGGAATAATATTTGGCAAAGATCGAGCTAA
TGCACAAGGAGCTGAAGCGCCAGGAGATATGGCTGAGAAAATAAACACGGAAACAAGTCAAATGATGTGGGATGACTTTAGTGATTGTTATATGCCACATCTACATGAGG
AGAAAAAGGAAAAAAATGGACATAAATTAGTTGAAATTGTGGCTACATCTATGGATAATATGAATGTGATGTATGAGAAAACAACTGAAAACATCGGTAAGATTGCCAAG
TACTTTGAAGCTCAAACAATTGTTTATGAAAGAAGAAACACTACTACAATTTTAGCTTTCTATGACAATTTTTAA
Protein sequenceShow/hide protein sequence
MEDIDQCRWNVNKKHVRTKEEDGKLVECLLELANLSQWRCDNETFRSGYLQQLEKMMKPKLPQCEVKAQPHIESRVKLLKKQYSAIAEMLGPNCSGFGWNEREKCIDCSK
DVFDDWFKSHSSARGLQNKSFPYLDELGIIFGKDRANAQGAEAPGDMAEKINTETSQMMWDDFSDCYMPHLHEEKKEKNGHKLVEIVATSMDNMNVMYEKTTENIGKIAK
YFEAQTIVYERRNTTTILAFYDNF