CuGenDBv2

Gene ID	Sed0003575
Organism	Sechium edule (Chayote v1)
Description	paladin
Genome location	LG11:19628303..19629536
RNA-Seq Expression	Sed0003575
Synteny	Sed0003575
Gene Ontology terms	GO:0035335 - peptidyl-tyrosine dephosphorylation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0004725 - protein tyrosine phosphatase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7013719.1 Paladin [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-74

85.62

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAILCIRLGAEADF SNIPQ++ NADL +  ED LH+QASEEAAFR+GDYRDIL+LTRVLM+GPKSKADVDIVI+RCAGAGHLRDDI YYCKELKKFP  
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
        D+EHRAYLMDMGIKALRRYFFLITF+SYLYC KAE+MKFT WMK RPELGHLCNNLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

XP_008458276.1 PREDICTED: paladin [Cucumis melo]

9.3e-75

86.96

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Query:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV
        MAILCIRL  EAD F SNIPQTMTN +L +  EDSLH+QASEE AF++GDYRDIL+LTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFP 
Subjt:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV

Query:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
         DD+HRAYLMDMGIKALRRYFFLITFRSYLYC KAEEMKFT WMKERPELGHLCNNLRI K
Subjt:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

XP_022158705.1 paladin isoform X1 [Momordica charantia]

4.5e-77

88.12

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAI+CIRLG EADF SNIPQ+MTNADL + CEDSLHSQASEEAAF+ GDYRDIL+LTRVLMYGPKSKADVDIVI+RCAGAGHLRDDILYY KELKK P D
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
        DDEH+AYLMDMGIKALRRYFFLITFRSYLYC KAEE +FT WMKERPELGHLCNNLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

XP_022959171.1 paladin isoform X1 [Cucurbita moschata]

1.6e-74

85.62

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAILCIRLGAEADF SNIPQ++ NADL +  ED LH+QASEEAAFR+GDYRDIL+LTRVLM+GPKSKADVDIVI+RCAGAGHLRDDI YYCKELKKFP  
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
        D+EHRAYLMDMGIKALRRYFFLITF+SYLYC KAE+MKFT WMK RPELGHLCNNLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

XP_038874639.1 paladin isoform X1 [Benincasa hispida]

2.6e-77

88.82

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Query:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV
        MAILCIRLG EAD F +NIPQ+MTN+DL + C DSLH+QASEEAAFR+GDYRDIL+LTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFP 
Subjt:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV

Query:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
         DDEHRAYLMDMGIKALRRYFFLITFRSYLYC KAEEMKFT WMK+RPELGHLCNNLRIDK
Subjt:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB71 Uncharacterized protein

2.7e-72

85.09

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Query:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV
        MAILCIRLG E D F SNI QTM N +L +  ED LH+QASEE AF++GDYRDIL+LTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYY KELKKFP 
Subjt:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV

Query:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
         DDEHRAYLMDMGIKALRRYFFLITFRSYLYC KAEEMKFT WMKERPELGHLCNNLRI K
Subjt:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

A0A1S3C832 paladin

4.5e-75

86.96

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Query:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV
        MAILCIRL  EAD F SNIPQTMTN +L +  EDSLH+QASEE AF++GDYRDIL+LTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFP 
Subjt:  MAILCIRLGAEAD-FVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPV

Query:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
         DD+HRAYLMDMGIKALRRYFFLITFRSYLYC KAEEMKFT WMKERPELGHLCNNLRI K
Subjt:  DDDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

A0A6J1DWJ7 paladin isoform X1

2.2e-77

88.12

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAI+CIRLG EADF SNIPQ+MTNADL + CEDSLHSQASEEAAF+ GDYRDIL+LTRVLMYGPKSKADVDIVI+RCAGAGHLRDDILYY KELKK P D
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
        DDEH+AYLMDMGIKALRRYFFLITFRSYLYC KAEE +FT WMKERPELGHLCNNLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

A0A6J1H438 paladin isoform X1

7.7e-75

85.62

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAILCIRLGAEADF SNIPQ++ NADL +  ED LH+QASEEAAFR+GDYRDIL+LTRVLM+GPKSKADVDIVI+RCAGAGHLRDDI YYCKELKKFP  
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
        D+EHRAYLMDMGIKALRRYFFLITF+SYLYC KAE+MKFT WMK RPELGHLCNNLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

A0A6J1L094 paladin isoform X1

2.2e-74

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAILCIRLGAEADF SNIPQ++ NADL +  ED LH+QASEEAAFR+GDYRDIL+LTRVLM+GPKSKADVDIVI+RCAGAGHLRDDI YYCKELKKFP  
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
        D+EHRAYL+DMGIKALRRYFFLITF+SYLYC KAE+MKFT WMK RPELGHLCNNLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

SwissProt top hits

e value

%identity

Alignment

Q6DIR8 Paladin

6.8e-04

23.87

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Query:  SNIPQTMTNADLYH---TCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKEL-----KKFPVDDDEHRAY
        +N+   +    LYH    CE    SQ  +        ++ I N   ++  G     +VD  I+ C+    ++   LY CK+      + + +     + Y
Subjt:  SNIPQTMTNADLYH---TCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKEL-----KKFPVDDDEHRAY

Query:  LMDMGIKALRRYFFLITFRSYLY--CAKAEEMKFTPWMKERPELGHLCNNLRIDK
         +   + +L RYF+LITF  YL+     A  + F+ WM  +P +  L  +L + +
Subjt:  LMDMGIKALRRYFFLITFRSYLY--CAKAEEMKFTPWMKERPELGHLCNNLRIDK

Arabidopsis top hits

e value

%identity

Alignment

AT3G62010.1 unknown protein

1.3e-50

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAI C+ L    +F +      TN+      ED   S A +E A  MGDYRDIL+L RVL +GP+SK+DVD +++ CAGAGHLR+DI+YY KEL K P+ 
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
         DE+R+Y+MDMG+KALRRYF+LITFRSYLY    EEMKF  WMK RPELGHLC+NLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

AT3G62010.2 unknown protein

1.3e-50

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Query:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD
        MAI C+ L    +F +      TN+      ED   S A +E A  MGDYRDIL+L RVL +GP+SK+DVD +++ CAGAGHLR+DI+YY KEL K P+ 
Subjt:  MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVD

Query:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK
         DE+R+Y+MDMG+KALRRYF+LITFRSYLY    EEMKF  WMK RPELGHLC+NLRIDK
Subjt:  DDEHRAYLMDMGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

Sequences

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CDS sequence

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ATGGCAATTCTATGTATAAGACTTGGTGCGGAGGCAGATTTTGTATCAAATATTCCTCAAACCATGACTAATGCAGATTTGTATCATACATGTGAAGACAGTTTGCATTC
TCAGGCATCTGAAGAAGCTGCATTCAGAATGGGTGATTATCGTGACATCCTAAACCTTACTCGAGTTCTCATGTACGGTCCCAAGAGTAAAGCCGATGTCGACATCGTCA
TTGATAGGTGTGCTGGAGCAGGGCATTTACGAGACGACATTCTCTATTACTGCAAGGAACTTAAAAAGTTTCCAGTCGACGACGACGAACATCGAGCTTACCTTATGGAT
ATGGGTATTAAGGCTCTAAGGCGATATTTCTTCCTCATCACTTTCAGATCCTACCTCTACTGTGCAAAGGCAGAGGAGATGAAATTCACACCATGGATGAAGGAACGGCC
CGAATTGGGGCATTTGTGTAATAATCTCCGAATCGACAAGTAG

mRNA sequence

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Protein sequence

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MAILCIRLGAEADFVSNIPQTMTNADLYHTCEDSLHSQASEEAAFRMGDYRDILNLTRVLMYGPKSKADVDIVIDRCAGAGHLRDDILYYCKELKKFPVDDDEHRAYLMD
MGIKALRRYFFLITFRSYLYCAKAEEMKFTPWMKERPELGHLCNNLRIDK

Sed0003575 (gene) of Chayote v1 genome