; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003587 (gene) of Chayote v1 genome

Gene IDSed0003587
OrganismSechium edule (Chayote v1)
DescriptionDNA-binding protein DDB_G0278111
Genome locationLG14:23741036..23747097
RNA-Seq ExpressionSed0003587
SyntenySed0003587
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]2.3e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEA+S+AEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQ+GQIVEKVSEERLIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022925642.1 DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita moschata]3.0e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEAKS+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEERLIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022926831.1 DNA-binding protein DDB_G0278111-like [Cucurbita moschata]4.0e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKS+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEE+LIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_023518943.1 DNA-binding protein DDB_G0278111-like [Cucurbita pepo subsp. pepo]5.2e-5295.31Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKS+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEE+LIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRS+LEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]1.0e-5296.88Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEA+S+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEERLIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

TrEMBL top hitse value%identityAlignment
A0A1S3AZB0 DNA-binding protein DDB_G02781111.1e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEA+S+AEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQ+GQIVEKVSEERLIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1EC84 DNA-binding protein DDB_G0278111-like isoform X21.5e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEAKS+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEERLIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1EFZ2 DNA-binding protein DDB_G0278111-like1.9e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKS+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEE+LIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1IVC3 DNA-binding protein DDB_G0278111-like isoform X21.5e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEAKS+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEERLIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1KTQ8 DNA-binding protein DDB_G0278111-like1.9e-5296.09Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        M DPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEAKS+AEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEE+LIT
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

SwissProt top hitse value%identityAlignment
O14737 Programmed cell death protein 52.8e-1643.75Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        MAD ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

P56812 Programmed cell death protein 52.8e-1643.75Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        MAD ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI 
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +LE+++ QT K+T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Q2HJH9 Programmed cell death protein 51.1e-1542.97Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        MA+ ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI 
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +LE+++ QT K+T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Q54YS0 DNA-binding protein DDB_G02781115.1e-1850.88Show/hide
Query:  QELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLITLLEQINNQTTKQTK
        Q+L   +G G   +PE Q+ QE  + +A ERRQ +L QIL+  ARERL+RI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ+ ++ TK+T 
Subjt:  QELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLITLLEQINNQTTKQTK

Query:  VTIQRRRSVLEDDD
        +T++RR   +EDDD
Subjt:  VTIQRRRSVLEDDD

Q5RBT0 Programmed cell death protein 52.8e-1643.75Show/hide
Query:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT
        MAD ELEA+R++R+ EL A+ G           AQ+EAK    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein9.1e-4783.21Show/hide
Query:  MADPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEER
        MADPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+AK +A+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEER
Subjt:  MADPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        LITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.2 double-stranded DNA-binding family protein1.2e-4682.58Show/hide
Query:  MADPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEE
        MADPELEAIRQRRMQELMA++GM    G+Q NPEQ+K QE+AK +A+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEE
Subjt:  MADPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEE

Query:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        RLITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.3 double-stranded DNA-binding family protein2.5e-4480.95Show/hide
Query:  MADPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEER
        MADPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+AK +A+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQ+GQIVEKVSEER
Subjt:  MADPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSV
        LITLLEQIN+QTTKQTKVT+    +V
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATCCTGAACTAGAAGCAATCAGACAAAGAAGAATGCAGGAACTCATGGCTCAGCGTGGCATGGGAAGCCAAAATAACCCAGAACAACAGAAGGCCCAGGAAGA
GGCTAAGAGTGATGCAGAGGAACGCAGACAAATGATGCTCAGTCAGATTCTGTCAATGCAAGCAAGAGAAAGACTTGCTCGAATTGCATTAGTTAAACCTGAGAAGGCGA
GAGGTGTCGAAGATGTTATACTGAGAGCTGCGCAGGTGGGCCAAATTGTAGAGAAGGTGTCTGAAGAGAGGCTTATAACATTGCTTGAACAGATCAACAACCAGACCACA
AAACAGACGAAAGTCACTATTCAAAGGCGTCGAAGCGTTCTTGAGGATGACGACTAG
mRNA sequenceShow/hide mRNA sequence
ATTTGGGCTTCAAGTTTCAGCTACGAGCGGGACAAAAACTGGGTCGCGTCTCATAAACGCAACGGAGCAAATCCTTCGCGGCCTTAAGCTTCTTGCATTCATAGCGGAAT
CTTGAACTGCTTCTACAAGCTCCATCCTCCAAACAATGGCTGATCCTGAACTAGAAGCAATCAGACAAAGAAGAATGCAGGAACTCATGGCTCAGCGTGGCATGGGAAGC
CAAAATAACCCAGAACAACAGAAGGCCCAGGAAGAGGCTAAGAGTGATGCAGAGGAACGCAGACAAATGATGCTCAGTCAGATTCTGTCAATGCAAGCAAGAGAAAGACT
TGCTCGAATTGCATTAGTTAAACCTGAGAAGGCGAGAGGTGTCGAAGATGTTATACTGAGAGCTGCGCAGGTGGGCCAAATTGTAGAGAAGGTGTCTGAAGAGAGGCTTA
TAACATTGCTTGAACAGATCAACAACCAGACCACAAAACAGACGAAAGTCACTATTCAAAGGCGTCGAAGCGTTCTTGAGGATGACGACTAGCAAGAGATCTGAATCACA
CACCGTATATGATATATGCATATACCAACAGTCTTGGTTGTATGTTTATGCTTGCGCAATACAATATCTACCTTTTATCTATATTCTGCTAAACTTTGTCATGGTCCCCT
CCCAAGTAATCTGAATGCAAGAGCTCCCTTGGAGTGGGCTGGTATTACATCATTGTTGTGGTCGAATTATCCAAACTATTATAACTATTAATCTGTATGACAGATTGTTG
ACCACGACCTCGAACTATTATTTTGATATTTGCTTTGATGTGTTTTATTTTAGAGATTGATCTGTCACTGTCTGATATGGTAGATTTGTAATGTTGTTTGAGGATATGTT
CCCCTTAAGGTTTCAGGTTCGAGACTCATTTGTGACGGGTGTGATTATCCTTTTCAAAAAAAAAAATATCCTTGTTTCAAAAAAAAAAAATGTGGTGGAGGTGCATTTGA
ATATCATTTTCTGATTCAGTATAAATGTGGAAGTTAGCAAAGTACAGGCTCATATAAAAAGGAA
Protein sequenceShow/hide protein sequence
MADPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEAKSDAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQVGQIVEKVSEERLITLLEQINNQTT
KQTKVTIQRRRSVLEDDD