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Sed0003596 (gene) of Chayote v1 genome

Gene IDSed0003596
OrganismSechium edule (Chayote v1)
DescriptionProtein transport protein Sec61 subunit gamma
Genome locationLG08:29416002..29417944
RNA-Seq ExpressionSed0003596
SyntenySed0003596
Gene Ontology termsGO:0006605 - protein targeting (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR008158 - Protein translocase SEC61 complex, gamma subunit
IPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON61297.1 Protein translocase SEC61 complex, gamma subunit [Parasponia andersonii]6.3e-2898.55Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

PPD68227.1 hypothetical protein GOBAR_DD34896 [Gossypium barbadense]3.7e-2898.55Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

TKY56943.1 transport protein Sec61 subunit gamma [Spatholobus suberectus]1.1e-2797.1Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKEF+KVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

XP_004145664.1 protein transport protein Sec61 subunit gamma [Cucumis sativus]1.4e-2798.53Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

XP_017614241.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium arboreum]8.2e-2897.1Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

TrEMBL top hitse value%identityAlignment
A0A0B0PVP9 protein transport protein Sec61 subunit gamma-like4.0e-2897.1Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

A0A2P5CJS2 Protein translocase SEC61 complex, gamma subunit3.0e-2898.55Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

A0A2P5FC78 Protein translocase SEC61 complex, gamma subunit3.0e-2898.55Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

A0A2P5YJE2 Uncharacterized protein4.0e-2897.1Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

A0A5D2GQC8 Uncharacterized protein4.0e-2897.1Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        M+AIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-17.7e-2992.65Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P0DI75 Protein transport protein Sec61 subunit gamma-27.7e-2992.65Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

P38385 Protein transport protein Sec61 subunit gamma4.5e-2994.12Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+A+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIPINNIIVGS
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q7Z1B8 Protein transport protein Sec61 subunit gamma4.5e-2172.06Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+ +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IPINNIIVGS
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

Q9SMP2 Protein transport protein Sec61 subunit gamma-32.9e-2889.86Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        MEAIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein2.1e-2989.86Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA
        MEAIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIPINNIIVGS+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA

AT4G24920.1 secE/sec61-gamma protein transport protein5.5e-3092.65Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS

AT5G50460.1 secE/sec61-gamma protein transport protein5.5e-3092.65Show/hide
Query:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS
        M+AIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATTGATTCCGTCTTCGATCCGCTTCGGGAGTTCGCTAAGGACAGTGTTCGTCTCGTCAAACGCTGCCACAAGCCCGATCGCAAAGAATTCACCAAGGTCGC
CGTTCGTACAGCGATTGGCTTCGTGGTGATGGGATTCGTTGGTTTCTTTGTCAAACTCATCTTCATCCCCATCAATAACATCATCGTCGGATCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCATTGATTCCGTCTTCGATCCGCTTCGGGAGTTCGCTAAGGACAGTGTTCGTCTCGTCAAACGCTGCCACAAGCCCGATCGCAAAGAATTCACCAAGGTCGC
CGTTCGTACAGCGATTGGCTTCGTGGTGATGGGATTCGTTGGTTTCTTTGTCAAACTCATCTTCATCCCCATCAATAACATCATCGTCGGATCTGCTTAGATCCTGCTTT
TGTCTTGGAATGTACAAAAGATGTTGGAAACCATTCCCATTGGGCTCACTTTTGCATAAGCAGAATGATTTGCATGGTTAGCATTCTACTTTTTGTTGGCATGATTATTG
ACTATTTTCATTCTCAAATAACTTTTGAATGTAATAATTGATGAGTGTGATTGCTGGTTCTAGCCCTTTTGGAGACAACATCAACTTTGAATAAAAACTTGAATTGGTAT
TGCATTCTGATGAATCATATTCATTAACTGTTGAATCTGTTTGGCAGACAGCAGCTGAGGCCACAGAA
Protein sequenceShow/hide protein sequence
MEAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSA