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Sed0003611 (gene) of Chayote v1 genome

Gene IDSed0003611
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:6999915..7004947
RNA-Seq ExpressionSed0003611
SyntenySed0003611
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2170.59Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK
        +AYMFAS RKKDLGQMEND+AEKDLGQLE+D +EK S  E  EIPSTFM DTT IVTENI EDQ Q+P  + + GWREK G +KK
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK

XP_022926648.1 uncharacterized protein LOC111433716 [Cucurbita moschata]2.1e-2069.41Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK
        +AYMFAS RKKDLGQMEN++AEKDLGQLE+D +EK S  E  EIPSTFM DTT IVTENI EDQ Q+P  + + GWREK G +KK
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK

XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]2.7e-2069.41Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK
        +AYMFAS RKKDLGQME+D+AEKDLGQLE+D +EK S  E  EIPSTFM DTT IVTENI EDQ Q+P  + + GWREK G +KK
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK

XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]2.7e-2069.41Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK
        +AYMFAS RKKDLGQMEND+AEKDLGQLE+D +EK S  E  EIPST M DTT IVTENI EDQ Q+P  + + GWREK G +KK
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK

XP_038880640.1 uncharacterized protein LOC120072271 [Benincasa hispida]3.2e-1361.18Show/hide
Query:  AYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYET-TEIPSTFMEDTTSIVTENILEDQKQEP-LYSMHGWREKLGWTKK
        AYMFAS RKK   Q+ENDQ            VEKQS  E  TEIPST M DTTSIVTEN+LEDQ+QEP  + + GWREKLG++KK
Subjt:  AYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYET-TEIPSTFMEDTTSIVTENILEDQKQEP-LYSMHGWREKLGWTKK

TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein2.9e-1256.98Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYE-TTEIPSTFMEDTTSIVTENILEDQKQEPLYS-MHGWREKLGWTKK
        +AYMFAS RK+   Q+ENDQ            VEKQS  E  TEIPST M DTT IVTEN+LEDQ+QEP    + GWREKLG+++K
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYE-TTEIPSTFMEDTTSIVTENILEDQKQEPLYS-MHGWREKLGWTKK

A0A1S3BR82 uncharacterized protein LOC1034923205.0e-1255.81Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYE-TTEIPSTFMEDTTSIVTENILEDQKQEPLYS-MHGWREKLGWTKK
        +AYMFAS RK+   ++ENDQ            VEKQS  E  TEIPST M DTT IVTEN+LEDQ+QEP    + GWREKLG+++K
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYE-TTEIPSTFMEDTTSIVTENILEDQKQEPLYS-MHGWREKLGWTKK

A0A6J1D315 uncharacterized protein LOC1110165443.1e-0649.32Show/hide
Query:  AYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPLYSMHG
        AYMFA+ RKKDLG+ME D  EK              G   T IPST M DTT+I  ENI ED ++EP   M G
Subjt:  AYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPLYSMHG

A0A6J1EIP0 uncharacterized protein LOC1114337161.0e-2069.41Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK
        +AYMFAS RKKDLGQMEN++AEKDLGQLE+D +EK S  E  EIPSTFM DTT IVTENI EDQ Q+P  + + GWREK G +KK
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK

A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X11.3e-2069.41Show/hide
Query:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK
        +AYMFAS RKKDLGQME+D+AEKDLGQLE+D +EK S  E  EIPSTFM DTT IVTENI EDQ Q+P  + + GWREK G +KK
Subjt:  TAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPSTFMEDTTSIVTENILEDQKQEPL-YSMHGWREKLGWTKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTTCTACTGATCTCCAATTTCGCCCTTTCAGGATTTCGCTAGGAGAAACGTTTACTGCAGTCATGACAGAATTTCCTCCTAACAAACTTCAAACACATGTTGC
GAGCACCAGCATAGCTCAACAATCAAGCCAAGTATTCTTTTCTAGCGCCTCAAATGGATCCAAGGCTCCAAGGCCCAAGACAGCCTACATGTTTGCAAGTGTAAGGAAGA
AAGATTTGGGTCAAATGGAGAATGATCAAGCAGAAAAAGATTTGGGTCAACTGGAGCACGATCTAGTAGAAAAACAAAGTGGTTATGAAACGACGGAAATACCCTCGACA
TTTATGGAGGATACCACCAGCATAGTTACAGAGAACATCTTGGAAGATCAGAAGCAAGAACCGTTGTACTCGATGCATGGATGGAGAGAAAAATTAGGTTGGACTAAAAA
ATGA
mRNA sequenceShow/hide mRNA sequence
TGTTTTTTCTCAAGAACATTTTGGGAGAGTACAATAGAGAATGGTGGGAGCATAATCTTATAATTGGGAATTTGAGTACAGGGCAACGTTGCTTGGCGCGCACACTAGAA
CTCACAAAAGACCAGGTCAACGACCCTGCCATCGCAAAGCACTCAAACTTCGCCATATCCAATGGCGGAACCACGAGCGCCACTGCCATCTCCATCTTCTCCTCCCAATC
GCTTAAAGGTCTTATGGCGGGTTCTACTGATCTCCAATTTCGCCCTTTCAGGATTTCGCTAGGAGAAACGTTTACTGCAGTCATGACAGAATTTCCTCCTAACAAACTTC
AAACACATGTTGCGAGCACCAGCATAGCTCAACAATCAAGCCAAGTATTCTTTTCTAGCGCCTCAAATGGATCCAAGGCTCCAAGGCCCAAGACAGCCTACATGTTTGCA
AGTGTAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGCAGAAAAAGATTTGGGTCAACTGGAGCACGATCTAGTAGAAAAACAAAGTGGTTATGAAACGACGGA
AATACCCTCGACATTTATGGAGGATACCACCAGCATAGTTACAGAGAACATCTTGGAAGATCAGAAGCAAGAACCGTTGTACTCGATGCATGGATGGAGAGAAAAATTAG
GTTGGACTAAAAAATGATTTGATAGGTGAAAAGCTGATTCTTGAACAGTTCAATGTCCTCTCAAAACTGATTAGAGCTCATCCAGGTAAATATGTTCAGCTGCTGTAAAA
TTAGGCGATTTTCTAGTAGACTGACTATTGTTATACTGGAATCTTCATTTACATTTATTTGGAAGTTTGTTACAATAATTTCTTCATTGTTTACCTAAATAGTTTGTACT
CATAACTATTTAATGGCGATTTAATTGGTGGAATGTGATCTGAATTGATTTGTTCTGGTTAGAGACTATCTCTGATGTCGGAAGTTTGATTCAGAATTGTTCGCCACCTA
CTGGTTTTTTTAGTAAAGTCTGACAGTTCCTATGAAATTAGTCGAAGTGTTTGTAAGTTAATCCCAAATACTGAGTGTATGTGTATAGTGCTAACTTAGATTTTTTTTCT
GATAATATGGGGAAGGAGGGA
Protein sequenceShow/hide protein sequence
MAGSTDLQFRPFRISLGETFTAVMTEFPPNKLQTHVASTSIAQQSSQVFFSSASNGSKAPRPKTAYMFASVRKKDLGQMENDQAEKDLGQLEHDLVEKQSGYETTEIPST
FMEDTTSIVTENILEDQKQEPLYSMHGWREKLGWTKK