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Sed0003613 (gene) of Chayote v1 genome

Gene IDSed0003613
OrganismSechium edule (Chayote v1)
DescriptionIndole-3-acetic acid-induced protein ARG2
Genome locationLG06:36411550..36413234
RNA-Seq ExpressionSed0003613
SyntenySed0003613
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606955.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1861.22Show/hide
Query:  MARSLCGVK--------IMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        MARSL  V         I RGYRAGATAA QRVASG + E V+A S G  M+K+ EE  S E  AW+PDPVTG+YRP NY   ID VDLRAMLLKP R
Subjt:  MARSLCGVK--------IMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

KAG7036659.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1765.82Show/hide
Query:  RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        RGYRAGATAA +RVASG + E V+A S G  M+K+ EE  S E  AW+PDPVTG+YRP NY   ID VDLRAMLLKP R
Subjt:  RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

XP_022934354.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]4.6e-1350.94Show/hide
Query:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESE-SIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAML
        MAR   GVKI+              RGY A A AA +R          +A   G  MMK+GE++E S EK+AW+PDPVTG+YRP NY+ EIDAVDLRAM+
Subjt:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESE-SIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAML

Query:  LKPRRK
        L+PRRK
Subjt:  LKPRRK

XP_022949042.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]4.8e-1860.2Show/hide
Query:  MARSLCGVK--------IMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        MARSL  V         I RGYRAGATAA QRVASG + E V+A S G  M+K+ EE    E  AW+PDPVTG+YRP NY   ID VDLRAMLLKP+R
Subjt:  MARSLCGVK--------IMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

XP_038903721.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida]9.9e-1664.56Show/hide
Query:  RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        RGY A A AA QRVAS ++ E + A S+G  MMK+ E   S EK AW+PDPVTG+YRP NYA  IDAVDLRA LLKPRR
Subjt:  RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

TrEMBL top hitse value%identityAlignment
A0A6J1DM52 late embryogenis abundant protein 2-like2.1e-1152.08Show/hide
Query:  MARSLCGVKIMR-----GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRK
        MARS   VKIM      G+R       +R  +  + ++V A+ SG    KE  E  + EKMAW+PDPVTG+YRP N A EID VDLRAMLLKPRRK
Subjt:  MARSLCGVKIMR-----GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRK

A0A6J1DPX0 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like5.5e-1253.33Show/hide
Query:  MARSLCGVKIMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        M+  L      R Y A A AA Q VAS A+  +  A   G+M  +E   S S EK+AW+PDPVTGFYRP N + EIDA DLRA+LLKPRR
Subjt:  MARSLCGVKIMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

A0A6J1F2C1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like2.2e-1350.94Show/hide
Query:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESE-SIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAML
        MAR   GVKI+              RGY A A AA +R          +A   G  MMK+GE++E S EK+AW+PDPVTG+YRP NY+ EIDAVDLRAM+
Subjt:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESE-SIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAML

Query:  LKPRRK
        L+PRRK
Subjt:  LKPRRK

A0A6J1GAX2 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like2.3e-1860.2Show/hide
Query:  MARSLCGVK--------IMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        MARSL  V         I RGYRAGATAA QRVASG + E V+A S G  M+K+ EE    E  AW+PDPVTG+YRP NY   ID VDLRAMLLKP+R
Subjt:  MARSLCGVK--------IMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

A0A6J1J9I8 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like2.1e-1151.14Show/hide
Query:  LCGVKIMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRKE
        L    I RGY A A AA QR          +A   G MM KE +   S EK+AW+PDPVTG+YRP NY+ EIDAVDLRAM++  RR++
Subjt:  LCGVKIMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRKE

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG26.1e-0838.61Show/hide
Query:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEES-ESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAML
        MARS   VK++               G+ A A A       GAS+        G M+ K GEE     EK++W+PDPVTG+YRP N   EID  D+RA +
Subjt:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEES-ESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAML

Query:  L
        L
Subjt:  L

P46521 Late embryogenesis abundant protein Lea5-A4.3e-0640.59Show/hide
Query:  MARSLCGVKIMRG--YRAGATAAPQRVASGASVEQVSAE--SSGIM-------MMKEGEESES-IEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKP
        MARS+   K +    + A   +  +R  SGA    V+A     G M        MKE   SE+     AW PDPVTG+YRP N   EIDA DLR M+L  
Subjt:  MARSLCGVKIMRG--YRAGATAAPQRVASGASVEQVSAE--SSGIM-------MMKEGEESES-IEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKP

Query:  R
        R
Subjt:  R

P46522 Late embryogenesis abundant protein Lea5-D1.9e-0638.89Show/hide
Query:  MARSLCGVKIM--------------RGYR----AGATAAPQRVASGASVEQVSAESSGIMMMKEGEESES-IEKMAWMPDPVTGFYRPGNYAGEIDAVDL
        MARS+   K++              RGY     A  TA+  R  +   VE+  A       MKE   SE+     AW PDPVTG+YRP N   EIDA +L
Subjt:  MARSLCGVKIM--------------RGYR----AGATAAPQRVASGASVEQVSAESSGIMMMKEGEESES-IEKMAWMPDPVTGFYRPGNYAGEIDAVDL

Query:  RAMLLKPR
        R MLL  R
Subjt:  RAMLLKPR

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial1.2e-0841.35Show/hide
Query:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLL
        MARS+  VKI+              RGY   ATAA   V+SG      S   +  +M K+G E ES +K++W+PDP TG+YRP   + EIDA +LRA LL
Subjt:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLL

Query:  KPRR
          ++
Subjt:  KPRR

Q9SRX6 Late embryogenis abundant protein 29.7e-0638.04Show/hide
Query:  MARSLCGVKIMR--GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        MARSL   KI    G    + A  +R  + A+   +    S   M K   E+ S EK  W+PDP TG+YRP   + EID  +LRA+LL  ++
Subjt:  MARSLCGVKIMR--GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein6.9e-0738.04Show/hide
Query:  MARSLCGVKIMR--GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        MARSL   KI    G    + A  +R  + A+   +    S   M K   E+ S EK  W+PDP TG+YRP   + EID  +LRA+LL  ++
Subjt:  MARSLCGVKIMR--GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein2.6e-0639.24Show/hide
Query:  GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRK
        GY    TAA +     A   QV  +      M  GEE      + WMPDP TG+YRP N+A E+DAV+LR++     +K
Subjt:  GYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRK

AT4G02380.1 senescence-associated gene 218.7e-1041.35Show/hide
Query:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLL
        MARS+  VKI+              RGY   ATAA   V+SG      S   +  +M K+G E ES +K++W+PDP TG+YRP   + EIDA +LRA LL
Subjt:  MARSLCGVKIM--------------RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLL

Query:  KPRR
          ++
Subjt:  KPRR

AT4G02380.2 senescence-associated gene 215.6e-0945.57Show/hide
Query:  RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR
        RGY   ATAA   V+SG      S   +  +M K+G E ES +K++W+PDP TG+YRP   + EIDA +LRA LL  ++
Subjt:  RGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRR

AT4G15910.1 drought-induced 214.0e-0737.21Show/hide
Query:  CGVKIMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRK
        C + + R Y     A  Q V +    +  S       M + G + E+  + AW PDPVTG+YRP N A EID  +LR +LLK + K
Subjt:  CGVKIMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGATCTTTGTGTGGTGTGAAAATCATGCGTGGATACAGGGCGGGGGCAACTGCGGCGCCACAAAGAGTGGCGTCGGGCGCGTCGGTGGAACAAGTTTCGGCCGA
AAGCAGCGGCATAATGATGATGAAGGAAGGAGAAGAAAGTGAAAGTATAGAGAAGATGGCGTGGATGCCTGATCCGGTCACTGGCTTCTACCGGCCGGGGAACTACGCTG
GTGAGATCGACGCCGTCGATCTTCGTGCTATGCTGTTGAAGCCGAGAAGAAAAGAGAATACTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGATCTTTGTGTGGTGTGAAAATCATGCGTGGATACAGGGCGGGGGCAACTGCGGCGCCACAAAGAGTGGCGTCGGGCGCGTCGGTGGAACAAGTTTCGGCCGA
AAGCAGCGGCATAATGATGATGAAGGAAGGAGAAGAAAGTGAAAGTATAGAGAAGATGGCGTGGATGCCTGATCCGGTCACTGGCTTCTACCGGCCGGGGAACTACGCTG
GTGAGATCGACGCCGTCGATCTTCGTGCTATGCTGTTGAAGCCGAGAAGAAAAGAGAATACTAACTAA
Protein sequenceShow/hide protein sequence
MARSLCGVKIMRGYRAGATAAPQRVASGASVEQVSAESSGIMMMKEGEESESIEKMAWMPDPVTGFYRPGNYAGEIDAVDLRAMLLKPRRKENTN