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Sed0003617 (gene) of Chayote v1 genome

Gene IDSed0003617
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:4379086..4379406
RNA-Seq ExpressionSed0003617
SyntenySed0003617
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]9.0e-2666.02Show/hide
Query:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL
        +KL LV   VC+AILA S +A   A A + DP   E  SLLGCTSF+S+ATKCVIDV KN +APHPSCCKAFS L DCS +FLK IPS DM+LIK IC L
Subjt:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL

Query:  WGV
        WGV
Subjt:  WGV

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]1.3e-2465.35Show/hide
Query:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI
        ++L VCIAILA S  A    VA A      EDFSL  C SFV  ATKCVIDV KN +APHPSCC+A + L DCSS FLKDIPSGDM+L+KSIC  WGVSI
Subjt:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI

Query:  S
        S
Subjt:  S

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]1.5e-2869.9Show/hide
Query:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL
        MKL LV  LVCIAILA S MA   A+A A DP   E+FSLLGCTSF+S+AT C++DV KN +APHPSCCKAFS L DCSS+FLK IPS DM+LIK IC L
Subjt:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL

Query:  WGV
        WGV
Subjt:  WGV

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]4.1e-2666.02Show/hide
Query:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL
        +KL LV   VC+AILA S +A   A A + DP   E+ SLLGCTSF+S+ATKCVIDV KN +APHPSCCKAFS L DCS +FLK IPS DM+LIK IC L
Subjt:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL

Query:  WGV
        WGV
Subjt:  WGV

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]3.4e-2566.34Show/hide
Query:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI
        ++LLVCIAILA S  A    VA A      EDFSL  C SFV  ATKCVIDV KN +APHPSCC+A S L DCSS FLKDIPS DM+L+KSIC  WGVSI
Subjt:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A5A7U483 Uncharacterized protein4.4e-2666.02Show/hide
Query:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL
        +KL LV   VC+AILA S +A   A A + DP   E  SLLGCTSF+S+ATKCVIDV KN +APHPSCCKAFS L DCS +FLK IPS DM+LIK IC L
Subjt:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL

Query:  WGV
        WGV
Subjt:  WGV

A0A5A7U9B0 Uncharacterized protein6.3e-2565.35Show/hide
Query:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI
        ++L VCIAILA S  A    VA A      EDFSL  C SFV  ATKCVIDV KN +APHPSCC+A + L DCSS FLKDIPSGDM+L+KSIC  WGVSI
Subjt:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI

Query:  S
        S
Subjt:  S

A0A5D3CEQ4 Uncharacterized protein1.8e-2465.66Show/hide
Query:  LLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSIS
        LL CI ILA S MA  + VA A     I D SL  C SFV  AT+CVIDV KN +APHPSCC+A S L DCSS FLKDIPS DM+L+KSIC LWGVSIS
Subjt:  LLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSIS

A0A5D3CFS6 Uncharacterized protein1.7e-2566.34Show/hide
Query:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI
        ++LLVCIAILA S  A    VA A      EDFSL  C SFV  ATKCVIDV KN +APHPSCC+A S L DCSS FLKDIPS DM+L+KSIC  WGVSI
Subjt:  VILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSI

Query:  S
        S
Subjt:  S

A0A5D3CG41 Uncharacterized protein2.0e-2666.02Show/hide
Query:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL
        +KL LV   VC+AILA S +A   A A + DP   E+ SLLGCTSF+S+ATKCVIDV KN +APHPSCCKAFS L DCS +FLK IPS DM+LIK IC L
Subjt:  MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTL

Query:  WGV
        WGV
Subjt:  WGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAGCACTTGTAATCCTCCTAGTCTGCATAGCTATTTTAGCACCATCGACGATGGCCGGTGCGATAGCTGTTGCGGATGCACCCGATCCAATGGTGATAGAAGA
TTTCTCACTGTTAGGATGCACGTCTTTTGTTTCGGATGCGACGAAATGCGTGATCGATGTGTTTAAGAATAAAATTGCTCCTCATCCTTCATGTTGCAAAGCCTTTTCTA
ACCTTAAAGATTGTTCATCTGACTTTCTTAAAGACATACCATCCGGTGATATGGTTTTAATTAAGAGTATTTGTACATTGTGGGGGGTTTCAATTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAGCACTTGTAATCCTCCTAGTCTGCATAGCTATTTTAGCACCATCGACGATGGCCGGTGCGATAGCTGTTGCGGATGCACCCGATCCAATGGTGATAGAAGA
TTTCTCACTGTTAGGATGCACGTCTTTTGTTTCGGATGCGACGAAATGCGTGATCGATGTGTTTAAGAATAAAATTGCTCCTCATCCTTCATGTTGCAAAGCCTTTTCTA
ACCTTAAAGATTGTTCATCTGACTTTCTTAAAGACATACCATCCGGTGATATGGTTTTAATTAAGAGTATTTGTACATTGTGGGGGGTTTCAATTTCTTAA
Protein sequenceShow/hide protein sequence
MKLALVILLVCIAILAPSTMAGAIAVADAPDPMVIEDFSLLGCTSFVSDATKCVIDVFKNKIAPHPSCCKAFSNLKDCSSDFLKDIPSGDMVLIKSICTLWGVSIS