; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003641 (gene) of Chayote v1 genome

Gene IDSed0003641
OrganismSechium edule (Chayote v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationLG06:12354268..12355500
RNA-Seq ExpressionSed0003641
SyntenySed0003641
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3433792.1 hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]3.0e-5548.58Show/hide
Query:  TFINVYAENSKRRNDILEKR---SIKTTTSPVVESQTSKEKDIADKELM-ECIDVLNAMDELDGETYAKVLKLLHGDVTWRK------------------
        +FINVYAE++++RN+ILE +   S   T+S   +     +++  D++L+ +C ++LN MDE+DG++Y+K +KLLH DV                      
Subjt:  TFINVYAENSKRRNDILEKR---SIKTTTSPVVESQTSKEKDIADKELM-ECIDVLNAMDELDGETYAKVLKLLHGDVTWRK------------------

Query:  IFL--------RIPNAR---KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQH
        IFL        +I + R   +  L+  HDYV+ELLNG+++RC+DCFRM K +F+ FCE+LK+KTNLK SR+++VQE+VAIFLL I HNERNR+ AERFQH
Subjt:  IFL--------RIPNAR---KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQH

Query:  SGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK
        SG+TISR FN VLKKVC LGVE+IC  +   +  EIR   KY+PFFK
Subjt:  SGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK

KAF7123090.1 hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]2.6e-4642.01Show/hide
Query:  MSTFINVYAENSKRRNDILEKR--SIKTTTSPVVESQTSKEKDIAD--KELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR-------
        +S+ ++ +AEN+KRR D++E++        S V  S +  E  I      + EC  +LN MD+LD ++Y KVL+ LHGDV WR++F+ +P  R       
Subjt:  MSTFINVYAENSKRRNDILEKR--SIKTTTSPVVESQTSKEKDIAD--KELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR-------

Query:  ------------------------------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKV
                                                  +  ++  HDYV+E+LNG++ RC   FRMK  +F+AFCE LK   NLK SRYL++QE+V
Subjt:  ------------------------------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKV

Query:  AIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK
         IFLL I HNERNR+  ERFQHSG TIS  F+ VLK VCKLGV II PP   +IP +IR  +KYFPFFK
Subjt:  AIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK

KAF7148819.1 hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]1.2e-4641.85Show/hide
Query:  MSTFINVYAENSKRRNDILEKR--SIKTTTSPVVESQTSKEKDIAD--KELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR-------
        +S+ ++ +AENSKRR D++E++        S V  S +  E  I      + EC  +LN MD+LD ++Y KVL+ LHGD+ WR++F+ +P  R       
Subjt:  MSTFINVYAENSKRRNDILEKR--SIKTTTSPVVESQTSKEKDIAD--KELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR-------

Query:  -------------------------------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEK
                                                   +  ++  HDYV+E+LNG++ RC   FRMK  +F+AFCE LK   NLK SRYL++QE+
Subjt:  -------------------------------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEK

Query:  VAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK
        V IFLL I HNERNR+  ERFQHSG TIS  F+ VLK VCKLGV II PP   +IP +IR  +KYFPFFK
Subjt:  VAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK

XP_028094390.1 uncharacterized protein LOC114294454 [Camellia sinensis]3.0e-3454.2Show/hide
Query:  PNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV
        P   +  ++  HDYV+E+LNG++ R  + FRM+ D+F+  CE LK    L+ SRYL+VQE+V IFLL I HNERNR+  ERFQHSGQTIS+ FN VLK V
Subjt:  PNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV

Query:  CKLGVEIICPPDGYNIPQEIRSKSKYFPFFK
        C+LG ++I PPD   +P EIR   +++PFFK
Subjt:  CKLGVEIICPPDGYNIPQEIRSKSKYFPFFK

XP_030481634.1 protein ALP1-like [Cannabis sativa]3.7e-3745Show/hide
Query:  LMECIDVLNAMDELDGETYAKVLKLLHGDVT----------WRKIFLRIPNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLK
        L ECI+ LN +D + GE YAK ++    +V+          + +++L     R    +  H+YV+E+L+G+++RC+D FRM KD+F+ FC  LK K  L+
Subjt:  LMECIDVLNAMDELDGETYAKVLKLLHGDVT----------WRKIFLRIPNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLK

Query:  ASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK
         SRYLSV+E+V++FL V+ HNER+R+ AERFQHS  TIS  F  VL+ VC+L  E+I PP    +P EIR   KY+PF K
Subjt:  ASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFK

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ7 Uncharacterized protein1.4e-3751.69Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNL---------------------
        MD++DGE Y K+LKL HG                      HDYVIELLNGND+RCFDCFR ++  FV FCEDLK+KTNL                     
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNL---------------------

Query:  ----------------KASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD
                        KASRYL+VQEKVAIFLL+ISHNE NRI  ERFQHSG TIS  FN VL+KVCKLG+EII PP+
Subjt:  ----------------KASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD

A0A2N9GND4 Uncharacterized protein2.9e-2748.84Show/hide
Query:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKL
        +++D    H+Y++E+LNG D+ C++ FRM+K++F++ C+ LK+   L+ SR++SVQEKVAIF+L I H+ RNR+  +RFQHSG+TISR FN VL  + KL
Subjt:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKL

Query:  GVEIICPPDGY-NIPQEIRSKSKYFPFFK
          ++I P      IP  IR K KY+P+FK
Subjt:  GVEIICPPDGY-NIPQEIRSKSKYFPFFK

A0A5D3BNQ5 L10-interacting MYB domain-containing protein-like3.8e-2764.21Show/hide
Query:  STFINVYAENSKRRNDILEKRSIKTTTSPVVESQTSKEKDIADKELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYS
        S+F++VYAEN+KR+NDILEKRS   T+S V ESQTS +KD   +ELMEC+D+LN M+++DGE Y+K+LKLLHGD+ WRK+FLR+P++RKRD I S
Subjt:  STFINVYAENSKRRNDILEKRSIKTTTSPVVESQTSKEKDIADKELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYS

A0A5D3C5P0 L10-interacting MYB domain-containing protein-like3.8e-2764.21Show/hide
Query:  STFINVYAENSKRRNDILEKRSIKTTTSPVVESQTSKEKDIADKELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYS
        S+F++VYAEN+KR+NDILEKRS   T+S V ESQTS +KD   +ELMEC+D+LN M+++DGE Y+K+LKLLHGD+ WRK+FLR+P++RKRD I S
Subjt:  STFINVYAENSKRRNDILEKRSIKTTTSPVVESQTSKEKDIADKELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYS

A0A6A4KNZ4 Myb_DNA-bind_3 domain-containing protein (Fragment)1.4e-3443.63Show/hide
Query:  MSTFINVYAENSKRRNDILEKR--SIKTTTSPVVESQTSKEKDIADKE--LMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDL---
        +S+ ++++AEN KR  D++EK+        S V ES +  E  I      + EC  +LN M++L  ++Y  VL+ LHGDV WR++FL +P  ++  L   
Subjt:  MSTFINVYAENSKRRNDILEKR--SIKTTTSPVVESQTSKEKDIADKE--LMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDL---

Query:  ------------IYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIV
                       HDYV+E+LNG++ RC   FRMK  +F+AFCE LK   NLK SRYL++QE+V IFLL I HNER+R+  E FQHSG TIS  F IV
Subjt:  ------------IYSHDYVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIV

Query:  LKKV
        +  V
Subjt:  LKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.6e-0930.56Show/hide
Query:  CFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPP---DGYNIPQEIRS
        C    RM    F   C  L+   +L+ +  +S++E VA+FL +  HNE  R    RF  + +T+ R F  VL     L  + I  P   + Y IP+ ++ 
Subjt:  CFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPP---DGYNIPQEIRS

Query:  KSKYFPFF
          +Y+P+F
Subjt:  KSKYFPFF

AT5G28730.1 unknown protein2.0e-1236.04Show/hide
Query:  NDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICP---PDGYNIPQ
        N+  C    RM  + F   CE L  K  L++S  +S+ E VAIFL++ + N+  R  A RF H+ +TI R F+ VLK + +L VE I P    +   I  
Subjt:  NDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICP---PDGYNIPQ

Query:  EIRSKSKYFPF
         ++  ++Y+PF
Subjt:  EIRSKSKYFPF

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.2e-1438.14Show/hide
Query:  YVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICP
        +V ++LNG + +CF+ FRM K +F   C+ L+ +  L+ +  + ++ ++AIFL +I HN R R   E F +SG+TISR FN VL  V  +  +   P
Subjt:  YVIELLNGNDTRCFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACATTTATAAATGTGTATGCTGAAAATTCCAAGAGAAGAAATGACATTCTCGAGAAAAGATCTATTAAAACCACCACTAGTCCAGTTGTGGAAAGTCAAACATC
AAAAGAAAAAGATATTGCCGATAAAGAGTTAATGGAATGCATCGATGTCTTGAATGCAATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATG
GAGATGTTACTTGGAGAAAGATATTTTTGCGCATACCCAATGCAAGGAAGAGAGATTTGATTTATAGTCATGATTATGTGATTGAGTTATTGAATGGAAACGACACAAGA
TGTTTTGATTGCTTTAGGATGAAAAAAGATATATTCGTAGCTTTTTGTGAAGATTTAAAAGCGAAGACAAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGT
TGCCATTTTTTTATTAGTCATATCACATAATGAAAGAAATCGTATAGCAGCTGAAAGGTTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAA
AAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCCGACGGATATAATATACCACAAGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTCAAGGTAGAGCTTAAT
TATTTTTCCCCACAAACATGA
mRNA sequenceShow/hide mRNA sequence
GAATAAGAGAGCTAAGAAGTTTAGAAAAAGTGGTTGTCCGCACTATGTAAAGCTTATGAGAATTTTTGGAGATACCACAGCTACAGGTGTATATACTGGTCCATCGGCAA
GAGTTCCCAGATTCTGAAGATGAAAATGATGTTGGGAGCAATACAAATTGTATTGGTGAAGATAGTGGTCCTGAAAAGAGTAGAAAACGAGTTCGAAACAAGAGAGACGA
ATTTGGTAGTTTCATGTCAACATTTATAAATGTGTATGCTGAAAATTCCAAGAGAAGAAATGACATTCTCGAGAAAAGATCTATTAAAACCACCACTAGTCCAGTTGTGG
AAAGTCAAACATCAAAAGAAAAAGATATTGCCGATAAAGAGTTAATGGAATGCATCGATGTCTTGAATGCAATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTC
AAACTTTTGCATGGAGATGTTACTTGGAGAAAGATATTTTTGCGCATACCCAATGCAAGGAAGAGAGATTTGATTTATAGTCATGATTATGTGATTGAGTTATTGAATGG
AAACGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGATATATTCGTAGCTTTTTGTGAAGATTTAAAAGCGAAGACAAATTTGAAAGCATCTAGATATCTTTCTG
TTCAAGAGAAAGTTGCCATTTTTTTATTAGTCATATCACATAATGAAAGAAATCGTATAGCAGCTGAAAGGTTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAAC
ATTGTTTTGAAAAAAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCCGACGGATATAATATACCACAAGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTCAA
GGTAGAGCTTAATTATTTTTCCCCACAAACATGA
Protein sequenceShow/hide protein sequence
MSTFINVYAENSKRRNDILEKRSIKTTTSPVVESQTSKEKDIADKELMECIDVLNAMDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYSHDYVIELLNGNDTR
CFDCFRMKKDIFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGYNIPQEIRSKSKYFPFFKVELN
YFSPQT