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Sed0003670 (gene) of Chayote v1 genome

Gene IDSed0003670
OrganismSechium edule (Chayote v1)
DescriptionELL-associated factor 1-like
Genome locationLG04:8205672..8206547
RNA-Seq ExpressionSed0003670
SyntenySed0003670
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]4.2e-3060.63Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR
        MAEKKSP+  RLKK++ KLTAV+RLC+  RR  +R  S  SD R +G+R  LED+  I E+   R+L+RA SSR     +E+D+D+R++IFIENFRRQLR
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR

Query:  LERQISLQLRYYRINSSETDYDQRSPP
        LERQISLQLRYYR+NS ET+Y+Q SPP
Subjt:  LERQISLQLRYYRINSSETDYDQRSPP

KAG6577759.1 hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3063.78Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR
        MAE  +P+++R+KK++TKLTA +RLC   R P RR RS  SDGRT GLRS L DE  IVE  SVR+L+R  SSR+ S   EDD+D+R+QIFI+NFRRQL 
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR

Query:  LERQISLQLRYYRINSSETDYDQRSPP
        LERQISL+L YY INSSE DY+ RSPP
Subjt:  LERQISLQLRYYRINSSETDYDQRSPP

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]7.0e-3368.5Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR
        MA+KKSPLL RLKKS  KLTA LRLCV  R+  RR RS  SD RT GLRSFLEDE  IVE+ SVR+L+RA  S ++   FEDD+DKRSQIFI+ F RQLR
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR

Query:  LERQISLQLRYYRINSSETDYDQRSPP
        LERQISLQLRY R+NSSET+ +++SPP
Subjt:  LERQISLQLRYYRINSSETDYDQRSPP

KAG7015798.1 hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3164.57Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR
        MAE  +P+++R+KK++TKLTA +RLC   R P RR RS  SDGRT GLRS L DE  IVE  SVR+L+R  SSR+ S   EDD+D+R+QIFI+NFRRQL 
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR

Query:  LERQISLQLRYYRINSSETDYDQRSPP
        LERQISL+LRYY INSSE DY+ RSPP
Subjt:  LERQISLQLRYYRINSSETDYDQRSPP

XP_022145292.1 uncharacterized protein LOC111014780 [Momordica charantia]8.5e-3166.41Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLR----LCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFR
        MAEKKSPL+ RLKK+V K+TA+LR    LC+  RRP  R RS S   RT+GLRSFLEDE  I E+ S+RRL+RA S R  +A  EDD+DKRSQIFI+NF 
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLR----LCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFR

Query:  RQLRLERQISLQLRYYRINSSETDYDQRSPP
        R+LRLERQISLQLRYYRINSS T+ ++RSPP
Subjt:  RQLRLERQISLQLRYYRINSSETDYDQRSPP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein4.3e-2859.84Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSI-SSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQL
        MAEKKSP+  RL+K++ KL AVLRLC+  R+  RR  S  S D + +G+R  LED+  I E   VR+L+RA SSR     +E+D+D+R++IFIENFRRQL
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSI-SSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQL

Query:  RLERQISLQLRYYRINSSETDYDQRSP
        RLERQISLQLRYYR+NS ET+Y+QRSP
Subjt:  RLERQISLQLRYYRINSSETDYDQRSP

A0A0A0L6A3 Uncharacterized protein2.7e-1447.15Show/hide
Query:  LLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASA-RFEDDIDKRSQIFIENFRRQLRLERQIS
        + +RL++++ KL A LRLC+  RR                 RS      V+ +D + R L+R  SSR  S   FEDD+D R++IFIENFRRQLRLERQIS
Subjt:  LLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASA-RFEDDIDKRSQIFIENFRRQLRLERQIS

Query:  LQLRYYRI--NSSETDYDQRSPP
        LQLR Y +  NS ETDY++  PP
Subjt:  LQLRYYRI--NSSETDYDQRSPP

A0A2C9UBN9 Uncharacterized protein9.6e-1248.44Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVL-------RLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIE
        M  K   +L  LK++V KL  +L       R+    R   RRRR +S + R LGL   +ED +   E+  VR L R  S  S     EDDID+R++IFIE
Subjt:  MAEKKSPLLIRLKKSVTKLTAVL-------RLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIE

Query:  NFRRQLRLERQISLQLRYYRINSSETDY
        NFRRQL LERQISLQLRYYR NS   DY
Subjt:  NFRRQLRLERQISLQLRYYRINSSETDY

A0A5D3CHZ5 Uncharacterized protein2.1e-3060.63Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR
        MAEKKSP+  RLKK++ KLTAV+RLC+  RR  +R  S  SD R +G+R  LED+  I E+   R+L+RA SSR     +E+D+D+R++IFIENFRRQLR
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLR

Query:  LERQISLQLRYYRINSSETDYDQRSPP
        LERQISLQLRYYR+NS ET+Y+Q SPP
Subjt:  LERQISLQLRYYRINSSETDYDQRSPP

A0A6J1CW64 uncharacterized protein LOC1110147804.1e-3166.41Show/hide
Query:  MAEKKSPLLIRLKKSVTKLTAVLR----LCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFR
        MAEKKSPL+ RLKK+V K+TA+LR    LC+  RRP  R RS S   RT+GLRSFLEDE  I E+ S+RRL+RA S R  +A  EDD+DKRSQIFI+NF 
Subjt:  MAEKKSPLLIRLKKSVTKLTAVLR----LCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFR

Query:  RQLRLERQISLQLRYYRINSSETDYDQRSPP
        R+LRLERQISLQLRYYRINSS T+ ++RSPP
Subjt:  RQLRLERQISLQLRYYRINSSETDYDQRSPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein1.3e-0534.85Show/hide
Query:  KKSPLLIRLKKSVTKLTAVLRLCVPS--RRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASAR-------FEDDIDKRSQIFIEN
        K   LL RL+++V K+  VL   + S     P    S SS      LR    D   +    +    D   SSR A  R        ++DID ++++FI N
Subjt:  KKSPLLIRLKKSVTKLTAVLRLCVPS--RRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASAR-------FEDDIDKRSQIFIEN

Query:  FRRQLRLERQISLQLRYYRINSSETDYDQRSP
        F RQL++ERQISL+L+Y + N+   +Y  RSP
Subjt:  FRRQLRLERQISLQLRYYRINSSETDYDQRSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGAAGAAATCGCCATTGCTAATCCGCCTTAAGAAGTCAGTGACGAAGCTCACTGCAGTTCTCCGCCTCTGCGTCCCTTCCCGGCGACCTCCACGGCGGCGGCG
ATCGATCAGTTCCGACGGCCGGACGCTCGGGCTACGGAGTTTCTTAGAAGATGAGATCGTCATCGTTGAGGATGGCTCAGTGCGAAGGCTCGATCGTGCTCCGAGTTCAA
GGAGTGCGAGTGCGAGATTTGAAGACGACATCGATAAGCGATCTCAGATTTTCATCGAAAATTTCCGCCGTCAATTGAGGTTAGAACGACAGATTTCTTTGCAATTGAGG
TACTATAGAATTAATAGCTCTGAAACTGATTATGACCAAAGATCGCCTCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATTTGTTATTAATAAAATAAAATGAAAAATAAAAAACGATTTGACTCCCATATATAAATGCACCCTCCCCTTTCGGCTCATTGTATTTTCATTTCATTTCCGTTTCGAAG
CAGAGAAAACAAAAATGGCGGAGAAGAAATCGCCATTGCTAATCCGCCTTAAGAAGTCAGTGACGAAGCTCACTGCAGTTCTCCGCCTCTGCGTCCCTTCCCGGCGACCT
CCACGGCGGCGGCGATCGATCAGTTCCGACGGCCGGACGCTCGGGCTACGGAGTTTCTTAGAAGATGAGATCGTCATCGTTGAGGATGGCTCAGTGCGAAGGCTCGATCG
TGCTCCGAGTTCAAGGAGTGCGAGTGCGAGATTTGAAGACGACATCGATAAGCGATCTCAGATTTTCATCGAAAATTTCCGCCGTCAATTGAGGTTAGAACGACAGATTT
CTTTGCAATTGAGGTACTATAGAATTAATAGCTCTGAAACTGATTATGACCAAAGATCGCCTCCGTGATCGTCGATTCGATGAACGAATTTCGATTTGTAATCGAAATCG
ATGTTTGTTGATTTGTTGTTGAGTACTGTAAAGTTCGAATTGAGAGATTCTGTAATTCTGTAAAATTGGTTTGTTGTTTGTTTGTGTTTCCTTCTTGTGGAAGTTTTCTT
ACGAGTTCGTCGCTGATTTGTAGTTTTTGGTAAATTGTTGCTGTTGAGATTATGTATTTGTAGTTTCATATCATCTGAACGTGATGCCAAGTTCTTGATGGATTGAGTTA
TTCTGTTTTATTTGGATAATTTATTGTCAACGGCCTGTTAATTTTAAGCAGCATTTACCGACTTTTACTTTGAAACTTCATGAACAAGTAGAGCATTATAGTTGGA
Protein sequenceShow/hide protein sequence
MAEKKSPLLIRLKKSVTKLTAVLRLCVPSRRPPRRRRSISSDGRTLGLRSFLEDEIVIVEDGSVRRLDRAPSSRSASARFEDDIDKRSQIFIENFRRQLRLERQISLQLR
YYRINSSETDYDQRSPP