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Sed0003671 (gene) of Chayote v1 genome

Gene IDSed0003671
OrganismSechium edule (Chayote v1)
DescriptionGibberellin regulated protein
Genome locationLG01:60857945..60859823
RNA-Seq ExpressionSed0003671
SyntenySed0003671
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2998475.1 Protein GAST1 [Olea europaea subsp. europaea]7.1e-2654.87Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPY----ATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCY
        MAT   +L+  L  MFL      A  +D  SP P PS  +    AT GSL PQEC  RC ARC +  Y+K CM  C+ CCAKCLCVPPGTYGNK  CPCY
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPY----ATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCY

Query:  NNWKPYKDGPECP
        NNWK  + GP+CP
Subjt:  NNWKPYKDGPECP

XP_022153040.1 protein GAST1-like [Momordica charantia]2.4e-2960.55Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK
        MA++SS LLL L  MFLFFT+  A SS  A+   +  Y   TEG+LQPQECG RC ARC    ++K CM  C+ CCA CLCVPPGTYGNK MCPCYNNWK
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK

Query:  PYKDGPECP
          + GP+CP
Subjt:  PYKDGPECP

XP_022944307.1 gibberellin-regulated protein 5-like [Cucurbita moschata]6.9e-2958.72Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK
        MAT+S+FLLL LAFM L  T++ A +S   + A +  Y   T+GSL+P+ECG RC  RC    ++K CM  CR CCAKCLCVPPGTYGNK MCPCYNNWK
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK

Query:  PYKDGPECP
          + GP+CP
Subjt:  PYKDGPECP

XP_022985831.1 protein GAST1-like [Cucurbita maxima]3.4e-2857.8Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK
        MAT+S+FLLL LA M L  T++ A +S   + A +  Y   T+GSL+P+ECG RC  RC    ++K CM  CR CCAKCLCVPPGTYGNK MCPCYNNWK
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK

Query:  PYKDGPECP
          + GP+CP
Subjt:  PYKDGPECP

XP_023511912.1 protein GAST1-like [Cucurbita pepo subsp. pepo]3.8e-2756.88Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK
        MAT+S+FLLL  A M L  T++ A  S   + A +  Y   T+GSL+P+ECG RC  RC    ++K CM  CR CCAKCLCVPPGTYGNK MCPCYNNWK
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK

Query:  PYKDGPECP
          + GP+CP
Subjt:  PYKDGPECP

TrEMBL top hitse value%identityAlignment
A0A0L9TUK5 Uncharacterized protein1.0e-2552Show/hide
Query:  MATVSSFLLLLLAFMFLFF------TNLPAGSSDRASPAPAP----------SYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPP
        M T  + LL  L  M L F      T + A ++D  +PAPAP          S   +TEGSLQPQECG RC  RC + QY+K C+  C+ CCAKCLCVPP
Subjt:  MATVSSFLLLLLAFMFLFF------TNLPAGSSDRASPAPAP----------SYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPP

Query:  GTYGNKHMCPCYNNWKPYKDGPECP
        GTYGNK +CPCYNNWK  + GP+CP
Subjt:  GTYGNKHMCPCYNNWKPYKDGPECP

A0A6A4NIR2 Putative gibberellin regulated protein1.0e-2553.1Show/hide
Query:  VSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPS-----YPY--ATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCY
        +S  ++ L+A + L   N     +   +PAP P+     +P    TEGSLQPQECGARC  RC + QY+K CM  C+ CCAKCLCVPPGTYGNK +CPCY
Subjt:  VSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPS-----YPY--ATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCY

Query:  NNWKPYKDGPECP
        NNWK  + GP+CP
Subjt:  NNWKPYKDGPECP

A0A6J1DFN7 protein GAST1-like1.1e-2960.55Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK
        MA++SS LLL L  MFLFFT+  A SS  A+   +  Y   TEG+LQPQECG RC ARC    ++K CM  C+ CCA CLCVPPGTYGNK MCPCYNNWK
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK

Query:  PYKDGPECP
          + GP+CP
Subjt:  PYKDGPECP

A0A6J1FVD8 gibberellin-regulated protein 5-like3.3e-2958.72Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK
        MAT+S+FLLL LAFM L  T++ A +S   + A +  Y   T+GSL+P+ECG RC  RC    ++K CM  CR CCAKCLCVPPGTYGNK MCPCYNNWK
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK

Query:  PYKDGPECP
          + GP+CP
Subjt:  PYKDGPECP

A0A6J1J9B2 protein GAST1-like1.7e-2857.8Show/hide
Query:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK
        MAT+S+FLLL LA M L  T++ A +S   + A +  Y   T+GSL+P+ECG RC  RC    ++K CM  CR CCAKCLCVPPGTYGNK MCPCYNNWK
Subjt:  MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWK

Query:  PYKDGPECP
          + GP+CP
Subjt:  PYKDGPECP

SwissProt top hitse value%identityAlignment
A8MR46 Gibberellin-regulated protein 131.6e-2059.42Show/hide
Query:  TEGSLQP-QECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP
        T+ ++ P  ECG RC  RC   QY+K C+  C  CC KCLCVPPGTYGNK +CPCYNNWK    GP+CP
Subjt:  TEGSLQP-QECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP

P27057 Protein GAST15.0e-2260.29Show/hide
Query:  TEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP
        +EG L PQ+C  +C  RC +  Y+K CM  C+ CCAKCLCVP GTYGNK  CPCYNNWK  + GP+CP
Subjt:  TEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP

P46690 Gibberellin-regulated protein 45.1e-1944.23Show/hide
Query:  SFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDG
        +  LL L  +F+  T + A S      +     P    GSL+  +C + C  RC + QY K+C+T C  CC KCLCVPPG YGNK +C CYNNWK  + G
Subjt:  SFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDG

Query:  PECP
        P+CP
Subjt:  PECP

Q6NMQ7 Gibberellin-regulated protein 65.9e-2350Show/hide
Query:  VSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYK
        ++SFLLL + F F+  T      S  A   P    P    GSL+  +CG +C  RC   +Y K CM  C+ CCAKCLCVPPGTYGNK +CPCYNNWK  +
Subjt:  VSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYK

Query:  DGPECP
         GP+CP
Subjt:  DGPECP

Q84J95 Gibberellin-regulated protein 51.8e-1956.06Show/hide
Query:  GSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP
        G L+PQ+C ++C  RC    ++K CM  C  CC KCLCVPPGT+GNK  CPCYNNWK  +  P+CP
Subjt:  GSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein4.2e-2450Show/hide
Query:  VSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYK
        ++SFLLL + F F+  T      S  A   P    P    GSL+  +CG +C  RC   +Y K CM  C+ CCAKCLCVPPGTYGNK +CPCYNNWK  +
Subjt:  VSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYK

Query:  DGPECP
         GP+CP
Subjt:  DGPECP

AT3G02885.1 GAST1 protein homolog 51.3e-2056.06Show/hide
Query:  GSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP
        G L+PQ+C ++C  RC    ++K CM  C  CC KCLCVPPGT+GNK  CPCYNNWK  +  P+CP
Subjt:  GSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP

AT3G10185.1 Gibberellin-regulated family protein1.1e-2159.42Show/hide
Query:  TEGSLQP-QECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP
        T+ ++ P  ECG RC  RC   QY+K C+  C  CC KCLCVPPGTYGNK +CPCYNNWK    GP+CP
Subjt:  TEGSLQP-QECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP

AT5G15230.1 GAST1 protein homolog 43.6e-2044.23Show/hide
Query:  SFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDG
        +  LL L  +F+  T + A S      +     P    GSL+  +C + C  RC + QY K+C+T C  CC KCLCVPPG YGNK +C CYNNWK  + G
Subjt:  SFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDG

Query:  PECP
        P+CP
Subjt:  PECP

AT5G15230.2 GAST1 protein homolog 47.3e-2157.58Show/hide
Query:  GSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP
        GSL+  +C + C  RC + QY K+C+T C  CC KCLCVPPG YGNK +C CYNNWK  + GP+CP
Subjt:  GSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCGTTTCCAGCTTCCTCCTCCTCTTGCTTGCTTTCATGTTTCTTTTCTTCACAAACCTTCCGGCCGGCTCTAGCGACCGAGCGTCACCAGCACCAGCACCCTC
GTACCCATACGCCACCGAAGGCAGCCTCCAGCCGCAAGAATGCGGTGCTCGGTGCGTGGCACGGTGCTTGGAAGCGCAGTACAGGAAGTCGTGCATGACGCTCTGTAGAA
ACTGTTGTGCAAAGTGCTTGTGCGTTCCTCCAGGCACCTATGGGAACAAGCATATGTGCCCTTGCTATAACAATTGGAAGCCCTACAAAGATGGCCCAGAATGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
CAACAAACCCACTGATCTGTCTTACTTCACCTTTGAAGCAGAGACCACAATGGCTACCGTTTCCAGCTTCCTCCTCCTCTTGCTTGCTTTCATGTTTCTTTTCTTCACAA
ACCTTCCGGCCGGCTCTAGCGACCGAGCGTCACCAGCACCAGCACCCTCGTACCCATACGCCACCGAAGGCAGCCTCCAGCCGCAAGAATGCGGTGCTCGGTGCGTGGCA
CGGTGCTTGGAAGCGCAGTACAGGAAGTCGTGCATGACGCTCTGTAGAAACTGTTGTGCAAAGTGCTTGTGCGTTCCTCCAGGCACCTATGGGAACAAGCATATGTGCCC
TTGCTATAACAATTGGAAGCCCTACAAAGATGGCCCAGAATGCCCTTAAAAACTTCAAAGTTATTCATGGTGAAATAAAATAAATAAAGTTTTATCCTACATTGGAAGCT
GTTATGACCTAACAAAAATAATAAACTCAAC
Protein sequenceShow/hide protein sequence
MATVSSFLLLLLAFMFLFFTNLPAGSSDRASPAPAPSYPYATEGSLQPQECGARCVARCLEAQYRKSCMTLCRNCCAKCLCVPPGTYGNKHMCPCYNNWKPYKDGPECP