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Sed0003678 (gene) of Chayote v1 genome

Gene IDSed0003678
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:537714..538001
RNA-Seq ExpressionSed0003678
SyntenySed0003678
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025373.1 hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa]2.8e-2665.93Show/hide
Query:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
        MKIQF    AI+++L N + L+ CRTMKDD + WS L+QQSL+RAPVPPST++GD+NIPVPLGQ+AFAGK T PP F  PD L  PSGVAL
Subjt:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2261.96Show/hide
Query:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWS-ALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
        MKIQFA LLAI++VL N ++L+ CRTMK+D Q WS  LLQQSL+RAPVPPS KNG + IPVPLGQR+F GK T  P  +Y  ++  P GVA+
Subjt:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWS-ALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2260.42Show/hide
Query:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWS-ALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVALIKIN
        MKIQFA LLAI++VL N ++L+ CRTMK+D Q WS  LLQQSL+RAPVPP+ KNG + IP PLGQRAF GK T  P  +Y  ++  P GVA +K N
Subjt:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWS-ALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVALIKIN
KAG6571505.1 hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2464.84Show/hide
Query:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
        MKIQFA LLAIV++L N ++L+ CRTMKDD Q WS LLQQSL+RAPVPPS KNG + IPVPLGQRAF GK T  P  +Y  ++  P GVA+
Subjt:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
KAG6571506.1 hypothetical protein SDJN03_28234, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2568.13Show/hide
Query:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
        MKIQFA +LAI LVL N ++L+ CR MK D Q WS +LQQSL+RAPVPPS K+G + IPVPLG+RAFAGK  APP  AYPD L  PSGVAL
Subjt:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
TrEMBL top hitse value%identityAlignment
A0A0A0LCY5 Uncharacterized protein1.4e-2069.74Show/hide
Query:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWS---ALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTA
        MKIQF+ LLAI+++L NT+ L+ CRT+KDD QNWS    LLQQSL+R PVPPS KNGD+NIPVP+GQRAFAGK +A
Subjt:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWS---ALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTA
A0A5D3B777 Uncharacterized protein1.3e-2665.93Show/hide
Query:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
        MKIQF    AI+++L N + L+ CRTMKDD + WS L+QQSL+RAPVPPST++GD+NIPVPLGQ+AFAGK T PP F  PD L  PSGVAL
Subjt:  MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAATTTGCAATCTTGTTAGCCATTGTGCTTGTGCTTGGCAACACTAATAAGCTCGAAGGTTGCAGAACCATGAAAGATGATCTTCAAAACTGGTCGGCATT
GCTTCAACAGTCGCTGGAAAGAGCGCCGGTTCCTCCCTCCACCAAAAACGGCGACTCGAACATCCCGGTACCGCTCGGACAAAGGGCCTTTGCTGGAAAACACACCGCGC
CGCCGCCATTCGCCTACCCGGATCGTCTGTCGTTTCCCTCTGGTGTGGCCTTGATCAAGATAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCCAATTTGCAATCTTGTTAGCCATTGTGCTTGTGCTTGGCAACACTAATAAGCTCGAAGGTTGCAGAACCATGAAAGATGATCTTCAAAACTGGTCGGCATT
GCTTCAACAGTCGCTGGAAAGAGCGCCGGTTCCTCCCTCCACCAAAAACGGCGACTCGAACATCCCGGTACCGCTCGGACAAAGGGCCTTTGCTGGAAAACACACCGCGC
CGCCGCCATTCGCCTACCCGGATCGTCTGTCGTTTCCCTCTGGTGTGGCCTTGATCAAGATAAACTGA
Protein sequenceShow/hide protein sequence
MKIQFAILLAIVLVLGNTNKLEGCRTMKDDLQNWSALLQQSLERAPVPPSTKNGDSNIPVPLGQRAFAGKHTAPPPFAYPDRLSFPSGVALIKIN