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Sed0003701 (gene) of Chayote v1 genome

Gene IDSed0003701
OrganismSechium edule (Chayote v1)
DescriptionDefensin-like protein 1
Genome locationLG09:28273442..28274353
RNA-Seq ExpressionSed0003701
SyntenySed0003701
Gene Ontology termsNA
InterPro domainsIPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1669065.1 hypothetical protein ES319_1Z078900v1 [Gossypium barbadense]7.8e-0657.41Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +LI  LGP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

KAB1669066.1 hypothetical protein ES319_1Z078900v1 [Gossypium barbadense]6.6e-0551.85Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +     GP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

KAG6575964.1 hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia]8.3e-1665.67Show/hide
Query:  MASSSVNRASFFFILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        MASS   R+SF F+LC+AF+LIAGLG R G+AINL +VCLG CS  PNC  ACI  G  KGG+CLGF
Subjt:  MASSSVNRASFFFILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

XP_012448045.1 PREDICTED: putative defensin-like protein 73 isoform X1 [Gossypium raimondii]3.9e-0551.85Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +     GP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

XP_012448050.1 PREDICTED: defensin-like protein 81 isoform X2 [Gossypium raimondii]7.8e-0655.56Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  ++I  LGP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

TrEMBL top hitse value%identityAlignment
A0A0D2NB34 Uncharacterized protein1.9e-0551.85Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +     GP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

A0A1U8P9A9 putative defensin-like protein 731.9e-0551.85Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +     GP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

A0A5D2K8R8 Uncharacterized protein1.9e-0551.85Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +     GP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

A0A5D2PWN7 Uncharacterized protein3.8e-0657.41Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +LI  LGP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

A0A5J5N825 Uncharacterized protein3.8e-0657.41Show/hide
Query:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF
        ILC+  +LI  LGP   +AIN+P  CLG CS+ PNC ++CI KGF KGG C+GF
Subjt:  ILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCTCTGTCAATCGAGCTTCATTCTTCTTCATCCTTTGTATTGCTTTTCTTCTCATCGCTGGATTAGGGCCAAGGCAAGGAAATGCCATAAATTTACCATT
GGTGTGTTTGGGAGCATGCTCAAGTTTCCCAAATTGTACCAAAGCTTGCATCATGAAAGGATTTGTGAAAGGTGGTGATTGTTTGGGCTTCAGGCTGATCATATATATAT
ATATATATATATATGATCAGCCTGAAGCTTTTAATTCAATAAAACTACTCGTTACATTTCTTATCAATATTATATGTATGTCACCAAGACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCTCTGTCAATCGAGCTTCATTCTTCTTCATCCTTTGTATTGCTTTTCTTCTCATCGCTGGATTAGGGCCAAGGCAAGGAAATGCCATAAATTTACCATT
GGTGTGTTTGGGAGCATGCTCAAGTTTCCCAAATTGTACCAAAGCTTGCATCATGAAAGGATTTGTGAAAGGTGGTGATTGTTTGGGCTTCAGGCTGATCATATATATAT
ATATATATATATATGATCAGCCTGAAGCTTTTAATTCAATAAAACTACTCGTTACATTTCTTATCAATATTATATGTATGTCACCAAGACCATGA
Protein sequenceShow/hide protein sequence
MASSSVNRASFFFILCIAFLLIAGLGPRQGNAINLPLVCLGACSSFPNCTKACIMKGFVKGGDCLGFRLIIYIYIYIYDQPEAFNSIKLLVTFLINIICMSPRP