; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003703 (gene) of Chayote v1 genome

Gene IDSed0003703
OrganismSechium edule (Chayote v1)
DescriptionCAP-Gly domain-containing linker protein 1
Genome locationLG02:48874058..48876943
RNA-Seq ExpressionSed0003703
SyntenySed0003703
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438879.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo]6.0e-4681.82Show/hide
Query:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MAD+DSST   PSPAPLSA+        SKITELNESRSEL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLGLQDVSVD ++TQ QHP   SRDKED D  KK+G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

XP_022137849.1 uncharacterized protein LOC111009183 [Momordica charantia]6.6e-4575.69Show/hide
Query:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MADADS TPS+P+P+PLSAR        +KITELNESR+EL +RIQ LKQDLQNWRSKLD QVNTYRSELSELKKSLNVEVE LRTEF+ELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNGG
        DVT SLRNLGLQDVS+D D+TQRQHP+ ES DKE  D  +   G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNGG

XP_022979959.1 CAP-Gly domain-containing linker protein 1 [Cucurbita maxima]1.7e-4578.32Show/hide
Query:  MADADSSTPSIPSPAPLSARN-------SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MADADSS+PS+P+PAPLSA+N       SKI+ELNESR+EL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSARN-------SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLGLQDVSVD ++T+ QHP  E  +KED     K G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

XP_023527984.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]2.3e-4579.02Show/hide
Query:  MADADSSTPSIPSPAPLSARN-------SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MADADSS+PS  +PAPLSA+N       SKI+ELNESR+EL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSARN-------SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLGLQDVSVD ++T+ QHP  E  DKED D   K G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

XP_038878824.1 CAP-Gly domain-containing linker protein 1 isoform X1 [Benincasa hispida]5.1e-4581.12Show/hide
Query:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MADADSST   PS APLSA+        SKITELNESRSEL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLGLQDVSV+ ++ Q QHP VES DKED D  KK+G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

TrEMBL top hitse value%identityAlignment
A0A1S3AXE8 CAP-Gly domain-containing linker protein 1 isoform X17.1e-4581.25Show/hide
Query:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MAD+DSST   PSPAPLSA+        SKITELNESRSEL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLG-LQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLG LQDVSVD ++TQ QHP   SRDKED D  KK+G
Subjt:  DVTTSLRNLG-LQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

A0A1S3AY29 CAP-Gly domain-containing linker protein 1 isoform X22.9e-4681.82Show/hide
Query:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MAD+DSST   PSPAPLSA+        SKITELNESRSEL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLGLQDVSVD ++TQ QHP   SRDKED D  KK+G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X22.9e-4681.82Show/hide
Query:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MAD+DSST   PSPAPLSA+        SKITELNESRSEL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLGLQDVSVD ++TQ QHP   SRDKED D  KK+G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

A0A6J1C8F7 uncharacterized protein LOC1110091833.2e-4575.69Show/hide
Query:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MADADS TPS+P+P+PLSAR        +KITELNESR+EL +RIQ LKQDLQNWRSKLD QVNTYRSELSELKKSLNVEVE LRTEF+ELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSAR-------NSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNGG
        DVT SLRNLGLQDVS+D D+TQRQHP+ ES DKE  D  +   G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNGG

A0A6J1IY17 CAP-Gly domain-containing linker protein 18.4e-4678.32Show/hide
Query:  MADADSSTPSIPSPAPLSARN-------SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE
        MADADSS+PS+P+PAPLSA+N       SKI+ELNESR+EL+NRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQE
Subjt:  MADADSSTPSIPSPAPLSARN-------SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG
        DVTTSLRNLGLQDVSVD ++T+ QHP  E  +KED     K G
Subjt:  DVTTSLRNLGLQDVSVDGDDTQRQHPVVESRDKEDEDGVKKNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein3.0e-2761.54Show/hide
Query:  MAD--ADSSTP----SIPSPAPLSARN-----SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQ
        MAD  +DS++P    S+ SP      N     SK+TELNESR+EL+NRIQ+LKQDLQ+WR KLDTQV  YR ELS LKK+LN+EVE LR EF++L+TTL 
Subjt:  MAD--ADSSTP----SIPSPAPLSARN-----SKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQ

Query:  QQQEDVTTSLRNLGLQD
        QQQ+DV+ SL++LGLQD
Subjt:  QQQEDVTTSLRNLGLQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGCTGATTCTTCCACTCCCTCCATTCCTTCCCCTGCTCCTCTGTCAGCTAGAAATTCGAAAATCACGGAATTGAATGAATCAAGATCGGAGCTGGTTAATAG
AATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAGGTCAAAGCTGGACACTCAAGTTAATACCTATCGCAGTGAACTCTCTGAACTCAAGAAATCACTCAATGTCGAAG
TCGAACTACTTCGAACGGAATTCCAAGAACTACGGACTACCCTTCAGCAGCAACAAGAAGATGTAACAACTAGCCTGAGGAACTTGGGCCTCCAAGATGTTTCTGTGGAC
GGCGACGATACTCAACGTCAACATCCTGTAGTGGAAAGCAGGGACAAGGAAGACGAAGACGGGGTGAAGAAGAATGGAGGGGAATGA
mRNA sequenceShow/hide mRNA sequence
TAAAAATCCAAAAAAGATCATCTTTCTCGAACACACAAGAGAGGGGTTTGGGTTCAAATTTCAAATTCCGAATCCCATCTTCTTCGATTTCAATTCTTTCTTCCATTCAC
TTTCTCTTTCATCAATTTCTCCGATTCCCATTTCGATTTCACCCCATCTGAACCCTAATCCCCAATTCATCAGATTCCGATTCTTCTCATTTACCCATTTCGAGCCGATT
CGATCCCTGCCTCAATGGCGGACGCTGATTCTTCCACTCCCTCCATTCCTTCCCCTGCTCCTCTGTCAGCTAGAAATTCGAAAATCACGGAATTGAATGAATCAAGATCG
GAGCTGGTTAATAGAATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAGGTCAAAGCTGGACACTCAAGTTAATACCTATCGCAGTGAACTCTCTGAACTCAAGAAATC
ACTCAATGTCGAAGTCGAACTACTTCGAACGGAATTCCAAGAACTACGGACTACCCTTCAGCAGCAACAAGAAGATGTAACAACTAGCCTGAGGAACTTGGGCCTCCAAG
ATGTTTCTGTGGACGGCGACGATACTCAACGTCAACATCCTGTAGTGGAAAGCAGGGACAAGGAAGACGAAGACGGGGTGAAGAAGAATGGAGGGGAATGAAGCTTAAAA
TGAAGAGAAACTTTGTAGCACCCACGTTGTAAGTTTTTCATTGCATGAGAAAATAACTTTAGAGCTGCCCTCTTGTGTTCGTTATGTCTAGATGGATTTGCTACATTTTT
CTGTTTTGCATCATGCTCTATTCTTATTTTAATCTGTGTAATGGGATTCTTTCAATATTTCCCATTGAGGTTTTATGCGAATCTTCATTAACTCTTATAAACCAGTGTGT
TAG
Protein sequenceShow/hide protein sequence
MADADSSTPSIPSPAPLSARNSKITELNESRSELVNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVELLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD
GDDTQRQHPVVESRDKEDEDGVKKNGGE