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Sed0003732 (gene) of Chayote v1 genome

Gene IDSed0003732
OrganismSechium edule (Chayote v1)
Descriptionhydroxyproline-rich glycoprotein family protein
Genome locationLG06:11380451..11381750
RNA-Seq ExpressionSed0003732
SyntenySed0003732
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607098.1 hypothetical protein SDJN03_00440, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3556.25Show/hide
Query:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------
        MEI +E PT+P   TQ                ET A PELETP NG+ DREK+ + GQ+ MESSKCECKT TPDEK   KQ  +  +             
Subjt:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------

Query:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
            G+  +  GI  P NGTPNRLK+PKAFKY ERY+SPTDLMMSPI+KGLLARTRKGA+PSKMHELRI+EMSL S
Subjt:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

XP_022155023.1 uncharacterized protein LOC111022170 [Momordica charantia]2.6e-2855.19Show/hide
Query:  PPTVPKAPTQPETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK-------------KQSAVTEIETGQ------RVKFRGIEFPVNGT
        P  + K     ET A PE ETP       +KE+   QN  E S  E KTATP EK             K  ++  ++  +      +VKF GIE P NGT
Subjt:  PPTVPKAPTQPETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK-------------KQSAVTEIETGQ------RVKFRGIEFPVNGT

Query:  PNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSL
        PNRLK+PKAFKYPERY SPTDLMMSPISKGLLARTRKGA+PSKMHELRI EMSL
Subjt:  PNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSL

XP_022948389.1 uncharacterized protein LOC111452080 [Cucurbita moschata]1.1e-3456.25Show/hide
Query:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------
        MEI +E PT+P  PTQ                ET A  ELETP NG+ DREK+ + GQ+ MESSKCECKT TPDEK   KQ  +  +             
Subjt:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------

Query:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
            G+  +  GI  P NGTPNRLK+PKAFKY ERY+SPTDLMMSPI+KGLLARTRKGA+PSKMHELRI+EMSL S
Subjt:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

XP_022998048.1 uncharacterized protein LOC111492813 [Cucurbita maxima]1.7e-3556.82Show/hide
Query:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------
        MEI +E P +P  PTQ                ET A PELETP NG+ DREK+ +  QN MESSKCECKT TPDEK   KQ  +  +             
Subjt:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------

Query:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
            G+  +  GI FP NGTPNRLK+PKAFKY ERY+SPTDLMMSPI+KGLLARTRKGA+PSKMHELRI+EMSL S
Subjt:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

XP_023525350.1 uncharacterized protein LOC111788976 [Cucurbita pepo subsp. pepo]1.4e-3455.68Show/hide
Query:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------
        MEI +E PT+P  PTQ                ET A PELETP +G+ DREK+ + G+N  ESSKCECKT TPDEK   KQ  +  +             
Subjt:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------

Query:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
            G+  +  GI  P NGTPNRLK+PKAFKY ERY+SPTDLMMSPI+KGLLARTRKGA+PSKMHELRI+EMSL S
Subjt:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

TrEMBL top hitse value%identityAlignment
A0A1S3CI15 uncharacterized protein LOC1035011894.2e-2454.42Show/hide
Query:  VPKAPTQ-----------PETRAIPELETPNNGSADREK--EEEGGQNDMESSKCECKTATPDEKKQSAVTEIETGQRVKFRGIEFPVNGTPNRLKLPKA
        VPK+PT+            +T     +  P NGS DR K  +  G  N       ECKT T               QRVK  GIE P NGTPNRLKLP A
Subjt:  VPKAPTQ-----------PETRAIPELETPNNGSADREK--EEEGGQNDMESSKCECKTATPDEKKQSAVTEIETGQRVKFRGIEFPVNGTPNRLKLPKA

Query:  FKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
        FKYPERY SPTDLM+SPISKGLLARTRKGA+PSKMHELR +EMSL S
Subjt:  FKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

A0A5A7UZK0 Uncharacterized protein4.2e-2454.42Show/hide
Query:  VPKAPTQ-----------PETRAIPELETPNNGSADREK--EEEGGQNDMESSKCECKTATPDEKKQSAVTEIETGQRVKFRGIEFPVNGTPNRLKLPKA
        VPK+PT+            +T     +  P NGS DR K  +  G  N       ECKT T               QRVK  GIE P NGTPNRLKLP A
Subjt:  VPKAPTQ-----------PETRAIPELETPNNGSADREK--EEEGGQNDMESSKCECKTATPDEKKQSAVTEIETGQRVKFRGIEFPVNGTPNRLKLPKA

Query:  FKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
        FKYPERY SPTDLM+SPISKGLLARTRKGA+PSKMHELR +EMSL S
Subjt:  FKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

A0A6J1DLV5 uncharacterized protein LOC1110221701.3e-2855.19Show/hide
Query:  PPTVPKAPTQPETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK-------------KQSAVTEIETGQ------RVKFRGIEFPVNGT
        P  + K     ET A PE ETP       +KE+   QN  E S  E KTATP EK             K  ++  ++  +      +VKF GIE P NGT
Subjt:  PPTVPKAPTQPETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK-------------KQSAVTEIETGQ------RVKFRGIEFPVNGT

Query:  PNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSL
        PNRLK+PKAFKYPERY SPTDLMMSPISKGLLARTRKGA+PSKMHELRI EMSL
Subjt:  PNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSL

A0A6J1G9R7 uncharacterized protein LOC1114520805.3e-3556.25Show/hide
Query:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------
        MEI +E PT+P  PTQ                ET A  ELETP NG+ DREK+ + GQ+ MESSKCECKT TPDEK   KQ  +  +             
Subjt:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------

Query:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
            G+  +  GI  P NGTPNRLK+PKAFKY ERY+SPTDLMMSPI+KGLLARTRKGA+PSKMHELRI+EMSL S
Subjt:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

A0A6J1KFQ1 uncharacterized protein LOC1114928138.2e-3656.82Show/hide
Query:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------
        MEI +E P +P  PTQ                ET A PELETP NG+ DREK+ +  QN MESSKCECKT TPDEK   KQ  +  +             
Subjt:  MEIVSEPPTVPKAPTQP---------------ETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEK---KQSAVTEIE------------

Query:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS
            G+  +  GI FP NGTPNRLK+PKAFKY ERY+SPTDLMMSPI+KGLLARTRKGA+PSKMHELRI+EMSL S
Subjt:  ---TGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGALPSKMHELRITEMSLQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02120.1 hydroxyproline-rich glycoprotein family protein3.3e-1359.65Show/hide
Query:  GTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGA---LPSKMHELRITEM
        GTP RL++P AFKYPERY SPTD MMSP++KGLLARTRK +   +P   ++ +I E+
Subjt:  GTPNRLKLPKAFKYPERYSSPTDLMMSPISKGLLARTRKGA---LPSKMHELRITEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGTGAGTGAACCCCCCACCGTTCCCAAAGCCCCAACTCAGCCCGAAACTCGGGCGATCCCGGAGCTTGAAACGCCCAACAATGGAAGCGCAGATCGAGAGAA
GGAGGAGGAAGGAGGCCAAAACGACATGGAAAGTTCAAAATGTGAGTGTAAAACGGCAACCCCAGATGAGAAAAAACAGAGTGCAGTTACAGAAATAGAAACAGGGCAAA
GGGTCAAATTTAGAGGCATTGAATTTCCTGTAAATGGAACACCCAATCGCCTTAAACTCCCCAAAGCATTCAAATACCCTGAAAGGTATTCAAGTCCTACAGATTTGATG
ATGTCTCCTATCAGCAAAGGCCTTCTTGCCAGAACCAGGAAAGGGGCTCTCCCTTCTAAGATGCATGAGTTGAGAATTACAGAGATGAGTCTCCAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
AATCCATTCCATCATTTTGAAAAACCTCATCCATTCCAATGGAGATTGTGAGTGAACCCCCCACCGTTCCCAAAGCCCCAACTCAGCCCGAAACTCGGGCGATCCCGGAG
CTTGAAACGCCCAACAATGGAAGCGCAGATCGAGAGAAGGAGGAGGAAGGAGGCCAAAACGACATGGAAAGTTCAAAATGTGAGTGTAAAACGGCAACCCCAGATGAGAA
AAAACAGAGTGCAGTTACAGAAATAGAAACAGGGCAAAGGGTCAAATTTAGAGGCATTGAATTTCCTGTAAATGGAACACCCAATCGCCTTAAACTCCCCAAAGCATTCA
AATACCCTGAAAGGTATTCAAGTCCTACAGATTTGATGATGTCTCCTATCAGCAAAGGCCTTCTTGCCAGAACCAGGAAAGGGGCTCTCCCTTCTAAGATGCATGAGTTG
AGAATTACAGAGATGAGTCTCCAAAGCTGATGTCATGGATTCTCTTTTCTTTTTCCTCTTCAACAATTTGTTTCACTCACATTGTGATGCAATCTCATGCCTTTTTATTA
TTTTCATTATTTGTGATTATTTCTTTCAATATGTTGTTGTTGGGGTGAGTCAGGTCAATATATTGTGGGGTAAGTTTTTTTCTCAAGTGCTTTTAACAGCAACCAGTTTG
TTAACTAACCATGTAACAGTTACTAGCAGCAGATGGTTTTACCAACTTCACAACTTCTTTGGGAATTTGAATTACATAAAGGAGGAAACATCTTGCTATATAGACAATAT
CTCATATAAATATAAAGTTATGTGGATGTTTGAATGTTTTTTTTATATATATCTGTGACTGTTCGGGCTAACTTGCGCACACCTAAAACATATACCG
Protein sequenceShow/hide protein sequence
MEIVSEPPTVPKAPTQPETRAIPELETPNNGSADREKEEEGGQNDMESSKCECKTATPDEKKQSAVTEIETGQRVKFRGIEFPVNGTPNRLKLPKAFKYPERYSSPTDLM
MSPISKGLLARTRKGALPSKMHELRITEMSLQS