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Sed0003745 (gene) of Chayote v1 genome

Gene IDSed0003745
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:9760365..9761408
RNA-Seq ExpressionSed0003745
SyntenySed0003745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0736.22Show/hide
Query:  MRHSTNT-----AVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECLAVEE----------MSIDFYNVRRTGQRDSSICGRDYM
        M HS+N+     A A AA+ V I ML  S+C  ASP P  + N TVAAAAS WCDG  EEC+  E+           S   +    T  R+  +C R   
Subjt:  MRHSTNT-----AVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECLAVEE----------MSIDFYNVRRTGQRDSSICGRDYM

Query:  GRYVGCFMYKGSDNPKICRDNYDRSCK
        G Y  CF  + ++        Y R+C+
Subjt:  GRYVGCFMYKGSDNPKICRDNYDRSCK

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0737.9Show/hide
Query:  MRHSTNT--AVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECLAVEEMSIDFYNVRRTGQR----------DSSICGRDYMGRY
        M HS+N+   +A AA+ V I +L  S+C  ASP P  + N TVAAAAS WCDG  EEC+  E  S   +   +T  R          + ++C R     Y
Subjt:  MRHSTNT--AVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECLAVEEMSIDFYNVRRTGQR----------DSSICGRDYMGRY

Query:  VGCFMYKGSD-NPKICRDNYDRSC
          CF  + S+ NP  C   Y R C
Subjt:  VGCFMYKGSD-NPKICRDNYDRSC

KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]1.8e-1645.45Show/hide
Query:  STNTAVATAAIAVMI-SMLCASNCKAASPLPPIFDNETVAAAASK-WCDGLPEECLAVEEMSIDFYNVRRTGQRDSSICGRDYMGRYVGCFMYKGSDNPK
        +T  A +T A+ ++I ++  +S C AAS LP  F NET+ A  S  +C+GL ++C  VEE  I +Y+  RTG R SS+CGR Y G Y+ C   +GS  PK
Subjt:  STNTAVATAAIAVMI-SMLCASNCKAASPLPPIFDNETVAAAASK-WCDGLPEECLAVEEMSIDFYNVRRTGQRDSSICGRDYMGRYVGCFMYKGSDNPK

Query:  ICRDNYDRSC
         CR  YDR+C
Subjt:  ICRDNYDRSC

KGN57814.1 hypothetical protein Csa_009509 [Cucumis sativus]8.5e-0635.83Show/hide
Query:  MRHSTNTAVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECL-AVEEMSID------FYNVRRTGQRDSSICGRDYMGRYVG--C
        M   T T +   AI V++S + AS+CKAAS    + +  T AA +S WC+ L +ECL  VE+ +I+       YN  RT     ++CGR  +GRY    C
Subjt:  MRHSTNTAVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECL-AVEEMSID------FYNVRRTGQRDSSICGRDYMGRYVG--C

Query:  FMYKGSDNPKICRDNYDRSC
           K  +  + C   + RSC
Subjt:  FMYKGSDNPKICRDNYDRSC

TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein8.8e-1745.45Show/hide
Query:  STNTAVATAAIAVMI-SMLCASNCKAASPLPPIFDNETVAAAASK-WCDGLPEECLAVEEMSIDFYNVRRTGQRDSSICGRDYMGRYVGCFMYKGSDNPK
        +T  A +T A+ ++I ++  +S C AAS LP  F NET+ A  S  +C+GL ++C  VEE  I +Y+  RTG R SS+CGR Y G Y+ C   +GS  PK
Subjt:  STNTAVATAAIAVMI-SMLCASNCKAASPLPPIFDNETVAAAASK-WCDGLPEECLAVEEMSIDFYNVRRTGQRDSSICGRDYMGRYVGCFMYKGSDNPK

Query:  ICRDNYDRSC
         CR  YDR+C
Subjt:  ICRDNYDRSC

A0A0A0LA12 Uncharacterized protein4.1e-0635.83Show/hide
Query:  MRHSTNTAVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECL-AVEEMSID------FYNVRRTGQRDSSICGRDYMGRYVG--C
        M   T T +   AI V++S + AS+CKAAS    + +  T AA +S WC+ L +ECL  VE+ +I+       YN  RT     ++CGR  +GRY    C
Subjt:  MRHSTNTAVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECL-AVEEMSID------FYNVRRTGQRDSSICGRDYMGRYVG--C

Query:  FMYKGSDNPKICRDNYDRSC
           K  +  + C   + RSC
Subjt:  FMYKGSDNPKICRDNYDRSC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACATTCAACCAACACAGCTGTCGCAACCGCAGCGATCGCTGTCATGATTTCGATGCTTTGTGCAAGCAACTGCAAGGCTGCTTCTCCCCTTCCTCCCATTTTCGA
CAACGAGACCGTCGCTGCTGCAGCGTCGAAGTGGTGCGACGGCCTCCCCGAAGAATGCTTGGCCGTTGAAGAAATGTCCATTGATTTTTACAATGTTCGAAGGACAGGAC
AGCGAGACAGTTCTATATGTGGTCGGGACTATATGGGTAGATATGTTGGCTGCTTTATGTATAAAGGATCCGACAACCCAAAAATTTGTCGTGACAACTATGATCGAAGC
TGCAAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATCGCTGTGATACATAAGTGGTACACTCACTTTCATCCAGCTGTCGGCAAATGAAAACAGAAAGCGGGCAATTATTTTGAGAGTGAAAGGCACTTCAATATCACAATAAT
TTCAATTATTATGATCAATTCTTATCCCATTTGAATATCACTAAACTTATATCCACATGTTCTTCATCCTCTCATTCCTTTCATTATTTCTTCCCTTCTTTCTTTCTCCC
TCTTCCCCTTCCGATCAAAATTAATCCATGAGACATTCAACCAACACAGCTGTCGCAACCGCAGCGATCGCTGTCATGATTTCGATGCTTTGTGCAAGCAACTGCAAGGC
TGCTTCTCCCCTTCCTCCCATTTTCGACAACGAGACCGTCGCTGCTGCAGCGTCGAAGTGGTGCGACGGCCTCCCCGAAGAATGCTTGGCCGTTGAAGAAATGTCCATTG
ATTTTTACAATGTTCGAAGGACAGGACAGCGAGACAGTTCTATATGTGGTCGGGACTATATGGGTAGATATGTTGGCTGCTTTATGTATAAAGGATCCGACAACCCAAAA
ATTTGTCGTGACAACTATGATCGAAGCTGCAAATTATAAGAATTTAAGGAGAAGTCGACATGTCGTCCGCCAATTTCTCCGTTGACCTATCAGCTCACTAGGGTGAGTCT
TTGAAAGCTTATTTCCTTTGAAGTTAATAATTTGATGAACTTTTTGGTTAAGGCTTCTTCTTAAGCAATTTCCAATTTATTTTTATTTTTATTTTAGTTCATTTCGGCCT
CAATTATTGTTTAGGGTAACTGGTTCGGATATATGTAAGAAAGTGGGTTAAAGTGTAATAAATAAGTTTACCTTAAGGTGCGTTTTTAGACGTTTCGACTGGTTTTTTCT
TTAACATCATTTAATATGAGACCATAGCATGGAAGTCATTATAGCTAAATTCTTATCATGTTTTTTCCAGTATAATTAACATTATATTGAGAATCTATAAAGTTCAAAAA
GTATTTGGTCAAATAATTACTGACCAGAGCAATAATTGAATAACATCTTGATGT
Protein sequenceShow/hide protein sequence
MRHSTNTAVATAAIAVMISMLCASNCKAASPLPPIFDNETVAAAASKWCDGLPEECLAVEEMSIDFYNVRRTGQRDSSICGRDYMGRYVGCFMYKGSDNPKICRDNYDRS
CKL