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Sed0003760 (gene) of Chayote v1 genome

Gene IDSed0003760
OrganismSechium edule (Chayote v1)
Descriptionprotein TAPETUM DETERMINANT 1-like
Genome locationLG06:39269316..39271267
RNA-Seq ExpressionSed0003760
SyntenySed0003760
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4574.8Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MAPF KLF ALL VSLL  KGNCQC  N++ +SQ MTGF+IHG TEWNVTISNNC+CSQS+VKLDCKGFQTT++IDPSIL ++D ECLVNNG PIF SNP
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        + F YAQDP+F+F LISSQI CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]3.6e-4271.54Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MAP AKLF ALL VS  L+K N QC ++N+T+ Q MTGF+IHG TEWN T+SNNC+CSQS+VKLDC+GFQTT++IDP IL I+D ECLVNNG PIFNS P
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF YAQ+PQFNF  ISSQI CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

XP_023004032.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima]2.2e-4472.36Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MAPFAKLF ALL VS LL+KGNCQC  N++ + Q M+GF+IHG TEWNVTISN C+CSQS+VKLDC+GFQTT++IDPS+L ++D+ECLVNNG PIF SN 
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF YA DP+F+F LISSQINCS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

XP_023518832.1 uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]8.5e-4472.36Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MAPFA LF ALL VSLL  KGN QC  N++ +SQ MTGF+IHG TEWNVTISNNC+CSQS+VKLDC+GFQTT+++DPSIL ++D ECLVNNG PIF SNP
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        + F YAQDP+F+F LISSQI CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]1.2e-4575.61Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MA F KL TALL++S L++ GNCQC +NN+T+SQ MTGF+IHG TEW VTISNNC CSQS+VK+DCKGFQTTE+IDPSIL + D ECLVNNG PIFNSNP
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF+YAQDPQFNF  ISSQI+CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ6 Uncharacterized protein3.0e-4270.73Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        M  F KL  ALL++S L++ GNCQC +NN+ +SQ MTGF+IHG TEW VTI+NNCICSQSD+KLDCKGF TT +IDPSIL ISD+ECLVNNG PIFNS P
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF YAQ P+FNF  +SSQI+CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like1.7e-4271.54Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MA   KL  ALL++S  ++ GNCQC +NN+T+SQ MTGF+IHG TEW+VTI+NNCICSQSD+KLDCKGF TT +IDPSIL+ISD ECLVNNG PIFNS P
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF YAQ P+FNF  ISSQI+CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like1.7e-4271.54Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MA   KL  ALL++S  ++ GNCQC +NN+T+SQ MTGF+IHG TEW+VTI+NNCICSQSD+KLDCKGF TT +IDPSIL+ISD ECLVNNG PIFNS P
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF YAQ P+FNF  ISSQI+CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

A0A6J1HGA0 uncharacterized protein At1g05835-like1.7e-4271.54Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MAP AKLF ALL VS  L+K N QC ++N+T+ Q MTGF+IHG TEWN T+SNNC+CSQS+VKLDC+GFQTT++IDP IL I+D ECLVNNG PIFNS P
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF YAQ+PQFNF  ISSQI CS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like1.1e-4472.36Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP
        MAPFAKLF ALL VS LL+KGNCQC  N++ + Q M+GF+IHG TEWNVTISN C+CSQS+VKLDC+GFQTT++IDPS+L ++D+ECLVNNG PIF SN 
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNP

Query:  ITFAYAQDPQFNFNLISSQINCS
        ITF YA DP+F+F LISSQINCS
Subjt:  ITFAYAQDPQFNFNLISSQINCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein7.0e-0427.27Show/hide
Query:  LFTALLLVSLLLNKGN-CQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNC-ICSQSDVKLDCKGFQTTENIDPS---ILTISDAECLVNNGNPIFNSNPI
        L+++L L+ L +  G  C+   +   V Q  T  K     ++ V + N C +C   +++L C+GF  +  +DP+   +L+ S   C+VN+G P+     +
Subjt:  LFTALLLVSLLLNKGN-CQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNC-ICSQSDVKLDCKGFQTTENIDPS---ILTISDAECLVNNGNPIFNSNPI

Query:  TFAYAQDPQFNFNLISSQINC
        +F Y+   QF    +S    C
Subjt:  TFAYAQDPQFNFNLISSQINC

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein7.0e-1234.96Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNC-ICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSN
        MA  A     L+L    +N+G   C +N L+V Q  TG  +    EW V ++N C  C     KL C GFQ+   +  S+L+ S   CL+N GN IF   
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNC-ICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSN

Query:  PITFAYAQDPQFNFNLISSQINC
           F Y  D  F+  +I   I C
Subjt:  PITFAYAQDPQFNFNLISSQINC

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein9.2e-1234.15Show/hide
Query:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNC-ICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSN
        MA  A     L+L    +N+G   C++N+L+V Q  TG  +    EW V ++N C  C   + +L C GF +   ID S+L  S   CLVN G  I    
Subjt:  MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNC-ICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSN

Query:  PITFAYAQDPQFNFNLISSQINC
         I F Y  D  F+  +I   + C
Subjt:  PITFAYAQDPQFNFNLISSQINC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCCCTTCGCCAAGCTATTCACTGCACTTCTCCTTGTCTCTCTCCTCCTTAATAAAGGAAATTGCCAATGTACTATGAACAACTTAACAGTCAGTCAAATGATGAC
TGGATTTAAGATTCATGGAAATACAGAATGGAATGTGACAATAAGCAACAACTGCATTTGCTCCCAGTCAGATGTGAAGCTTGACTGCAAAGGATTTCAAACTACAGAAA
ACATTGATCCTTCAATTTTGACCATTTCTGATGCAGAGTGTTTGGTCAACAATGGAAATCCAATATTTAATTCCAATCCAATCACTTTTGCTTATGCACAGGACCCTCAA
TTCAATTTCAACCTTATCTCTTCCCAGATTAATTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCCCTTCGCCAAGCTATTCACTGCACTTCTCCTTGTCTCTCTCCTCCTTAATAAAGGAAATTGCCAATGTACTATGAACAACTTAACAGTCAGTCAAATGATGAC
TGGATTTAAGATTCATGGAAATACAGAATGGAATGTGACAATAAGCAACAACTGCATTTGCTCCCAGTCAGATGTGAAGCTTGACTGCAAAGGATTTCAAACTACAGAAA
ACATTGATCCTTCAATTTTGACCATTTCTGATGCAGAGTGTTTGGTCAACAATGGAAATCCAATATTTAATTCCAATCCAATCACTTTTGCTTATGCACAGGACCCTCAA
TTCAATTTCAACCTTATCTCTTCCCAGATTAATTGTTCTTAA
Protein sequenceShow/hide protein sequence
MAPFAKLFTALLLVSLLLNKGNCQCTMNNLTVSQMMTGFKIHGNTEWNVTISNNCICSQSDVKLDCKGFQTTENIDPSILTISDAECLVNNGNPIFNSNPITFAYAQDPQ
FNFNLISSQINCS