; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003772 (gene) of Chayote v1 genome

Gene IDSed0003772
OrganismSechium edule (Chayote v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationLG02:45804368..45806896
RNA-Seq ExpressionSed0003772
SyntenySed0003772
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-11578.72Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS
        MVRP AAKGKKRK  E+YDR    DDDG +STA AKK+ VE    E+P + A  E FHELEGIPIVP +PKS + AGVIFVLERASLEVAK+GK+YQLL+
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS

Query:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT
        S DHS+FL RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+T
Subjt:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT

Query:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        QYLP+NS KMGFSHSS+KLV++R YLDAV+DDVDLVFVVG MAHGKIE  YTDDLLAISEYPLSA CCI +ICKDLADKW++
Subjt:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]2.2e-11679.14Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DH
        MVRP AAKGKKRK  EKYDR    D+DG +S++ AKK  VE EP +    E+FHELEGIPIVP +PK+ N+AGVIF+LERASLEVAK+GK+YQLL+S DH
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DH

Query:  SDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLP
        S++L RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+TQYLP
Subjt:  SDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLP

Query:  ANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        AN  KMGFSHSS+KLV+MRNYLDAVKDDVDLVFVVG MAHGKIE DYTDDLLAISEYPLSA CCI +ICKDLA+KW++
Subjt:  ANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

XP_022935622.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata]7.1e-11578.72Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS
        MVRP AAKGKKRK  E+YDR    DDDG +STA AKK+ VE    E+P + A  E FHELEGIPIVP +PKS + AGVIFVLERASLEVAK+GK+YQLL+
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS

Query:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT
        S DHS+FL RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+T
Subjt:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT

Query:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        QYLP+NS KMGFSHSS+KLV++R YLDAV+DDVDLVFVVG MAHGKIE  YTDDLLAISEYPLSA CCI +ICKDLADKW++
Subjt:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

XP_023527836.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita pepo subsp. pepo]9.3e-11578.72Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS
        MVRP AAKGKKRK  E+YDR    DDDG +STA AKK+ VE    E+P + A  E FHELEGIPIVP +PKS + AGVIFVLERASLEVAK+GK+YQLL+
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS

Query:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT
        S DHS+FL RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+T
Subjt:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT

Query:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        QYLP+NS KMGFSHSS+KLV++R YLDAV+DDVDLVFVVG MAHGKIE  YTDDLLAISEYPLSA CCI +ICKDLADKW++
Subjt:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]2.4e-11880.51Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDGDSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DHS
        MVRP AAKGKKRK  EKYDR    DDDG+ST  AKK T E EP +    E+FHELEGIPIVP +P S   AGVIFVLERASLEVAK+GK+YQLL+S DHS
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDGDSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DHS

Query:  DFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLPA
        +FL +NNRNPGDYRPDI H AL AIFDSRIAKAGRLKAVYVKTEKGLLIE+KPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+TQYLPA
Subjt:  DFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLPA

Query:  NSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        NS KMGFSHSS+KLV+MRNYLDAV+DDVDLVFVVG MAHGKIE DYTDDLLAISEYPLSA CCI +ICKDLA+KW+I
Subjt:  NSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein2.2e-11477.26Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDGDSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DHS
        MVRP AAKGKKRK  EKYDR    +D  +ST+ +KK  +E EP +    E+FHELEGIPI P +PK+ ++AGVIF+LERASLEVAK+GK+YQLL+S DHS
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDGDSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DHS

Query:  DFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLPA
        ++L RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+TQYLPA
Subjt:  DFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLPA

Query:  NSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        N  KMGFSHSS+KLV++RNYLDAVKDDVDLVFVVG MAHGKIE DYTDDLLAISEYPLSA CCI +ICKDLA+KW++
Subjt:  NSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP11.1e-11679.14Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DH
        MVRP AAKGKKRK  EKYDR    D+DG +S++ AKK  VE EP +    E+FHELEGIPIVP +PK+ N+AGVIF+LERASLEVAK+GK+YQLL+S DH
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DH

Query:  SDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLP
        S++L RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+TQYLP
Subjt:  SDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLP

Query:  ANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        AN  KMGFSHSS+KLV+MRNYLDAVKDDVDLVFVVG MAHGKIE DYTDDLLAISEYPLSA CCI +ICKDLA+KW++
Subjt:  ANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP11.1e-11679.14Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DH
        MVRP AAKGKKRK  EKYDR    D+DG +S++ AKK  VE EP +    E+FHELEGIPIVP +PK+ N+AGVIF+LERASLEVAK+GK+YQLL+S DH
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSS-DH

Query:  SDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLP
        S++L RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+TQYLP
Subjt:  SDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLP

Query:  ANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        AN  KMGFSHSS+KLV+MRNYLDAVKDDVDLVFVVG MAHGKIE DYTDDLLAISEYPLSA CCI +ICKDLA+KW++
Subjt:  ANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-13.5e-11578.72Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS
        MVRP AAKGKKRK  E+YDR    DDDG +STA AKK+ VE    E+P + A  E FHELEGIPIVP +PKS + AGVIFVLERASLEVAK+GK+YQLL+
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS

Query:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT
        S DHS+FL RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+T
Subjt:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT

Query:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        QYLP+NS KMGFSHSS+KLV++R YLDAV+DDVDLVFVVG MAHGKIE  YTDDLLAISEYPLSA CCI +ICKDLADKW++
Subjt:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-11.7e-11478.37Show/hide
Query:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS
        MVRP AAKGKKRK  E+YDR    DDDG +S A AKK+ VE    E+P + A  E FHELEGIPIVP +PKS + AGVIFVLERASLEVAK+GK+YQLL+
Subjt:  MVRPLAAKGKKRKNREKYDRVDGGDDDG-DSTALAKKSTVE----EEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLS

Query:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT
        S DHS+FL RNNRNPGDYRPDI H AL AIFDSRIAKAGRLK VYVKTEKGLLIEIKPYVR PRTQKRFYG+M QLLQKLSITA  KREKLFRVIKNP+T
Subjt:  S-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPIT

Query:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
        QYLP+NS KMGFSHSS+KLV++R YLDAV+DDVDLVFVVG MAHGKIE  YTDDLLAISEYPLSA CCI +ICKDLADKW++
Subjt:  QYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP12.7e-4043.41Show/hide
Query:  VIFVLERASLEVAKIGKSYQLLSSD-HSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLL
        +I VLE ASLE  K+GK+Y+LL+ D H   L +N R+PG+ RPDI H +L  + DS + +AG L+ VY+ T+K +LIE+ P  R PRT  RF GLM QLL
Subjt:  VIFVLERASLEVAKIGKSYQLLSSD-HSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLL

Query:  QKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLA
         KLS+ A    +KL +VIKNP++ + P    K+G S S   +  +R   + V     +VFVVG  AHGK+ ++YT+ +++IS YPLSA     ++     
Subjt:  QKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLA

Query:  DKWDI
        + W +
Subjt:  DKWDI

Q06287 Ribosomal RNA small subunit methyltransferase NEP17.3e-3843.19Show/hide
Query:  VIFVLERASLEVAKI------GKSYQLLS-SDHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYG
        +I VL  ASLE  KI      G  Y LL+  DH   L +  R+  + RPDI H  L  + DS I KAG+L+ VY++T +G+LIE+ P VR PRT KRF G
Subjt:  VIFVLERASLEVAKI------GKSYQLLS-SDHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYG

Query:  LMSQLLQKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEM--DYTDDLLAISEYPLSADCCI
        LM QLL KLSI + +  EKL +VIKNPIT +LP    K+  S  +  ++R+++Y++ + DD  +   VG MA GK     +Y D+ + +S YPLSA    
Subjt:  LMSQLLQKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEM--DYTDDLLAISEYPLSADCCI

Query:  GEICKDLADKWDI
         + C    D W+I
Subjt:  GEICKDLADKWDI

Q92979 Ribosomal RNA small subunit methyltransferase NEP11.2e-4040.25Show/hide
Query:  EPLDGAEIEEFHELEGIPIVPSNPK--SGNDAG---VIFVLERASLEVAKIGKSYQLLSSD-HSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRL
        +P + +  E+  + + +P  P  P+  +GN  G   +I VLE ASLE  K+GK+Y+LL+ D H   L +N R+PG+ RPDI H +L  + DS + +AG L
Subjt:  EPLDGAEIEEFHELEGIPIVPSNPK--SGNDAG---VIFVLERASLEVAKIGKSYQLLSSD-HSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRL

Query:  KAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGV
        + VY+ T+K +LIE+ P  R PRT  RF GLM QLL KLS+ A    +KL +VIKNP++ + P    K+G S S   +  +R   + V     +VFVVG 
Subjt:  KAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGV

Query:  MAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
         AHGK+ ++YT+ +++IS YPLSA     ++     + W +
Subjt:  MAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP12.5e-3841.9Show/hide
Query:  VIFVLERASLEVAKIGKSYQLLS-SDHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLL
        +I VLE A LE  K+  +++LL+  DH+  + +N R+PG  RPDI H  L  +FDS + +AG L+ V+V+TE  +LIEI P  R PRT KRF GLM QLL
Subjt:  VIFVLERASLEVAKIGKSYQLLS-SDHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLL

Query:  QKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYL-----DAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEI
         K  I A     +L  VIKNPIT ++P    K   S S   L   R+ +      +   D  +V V+G  AHG ++ DYT++L +IS YPLSA     +I
Subjt:  QKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYL-----DAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEI

Query:  CKDLADKWDI
        C    + W +
Subjt:  CKDLADKWDI

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-11.3e-3945.05Show/hide
Query:  VLERASLEVAKIGKSYQLLSSD-HSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKL
        VLE  SLE AK+G  Y +LSSD H++FL +  ++P DYRPDI H  L  + DS + +AG+L+ V+ +T K +L+++ P  R PRT  RF GLM QLL KL
Subjt:  VLERASLEVAKIGKSYQLLSSD-HSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKL

Query:  SITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKW
        SI A    +KL  V+KNP++ +LP  S KM  S +  +L  M N L A + D  LV ++G +A GKI +DY D    IS YPLSA     ++   L + W
Subjt:  SITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYLDAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKW

Query:  DI
         I
Subjt:  DI

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related7.0e-7653.69Show/hide
Query:  MVRPLAAKGKKRKNR-EKYDRVDGGDDD------------------GDSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERAS
        MVRP   K  KRK R E+YD+ +   ++                   +ST+ A++   EEE    A       + GIPIV + P     +G++FVLE+AS
Subjt:  MVRPLAAKGKKRKNR-EKYDRVDGGDDD------------------GDSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERAS

Query:  LEVAKIGKSYQLLSS-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATS
        LEVAK+GK+YQLL+S DH++FL +NNRNP DYRPDI H AL  I DS + KAGRLKAVYV+TEKG+L E+KP+VR PRT KRF G+M QLLQKLSITA +
Subjt:  LEVAKIGKSYQLLSS-DHSDFLGRNNRNPGDYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATS

Query:  KREKLFRVIKNPITQ-YLPANSHKMGFSHSSNKLVRMRNYLDAV-KDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI
         REKL R +KNPI + +LP NSH++GFSHSS KLV M+ +L  V  DD D VFVVG MAHGKI+ +Y D+ +++SEYPLSA  CI  IC+ LA  W+I
Subjt:  KREKLFRVIKNPITQ-YLPANSHKMGFSHSSNKLVRMRNYLDAV-KDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGACCATTAGCGGCGAAAGGGAAGAAGAGAAAGAACAGAGAGAAATACGACAGAGTCGACGGCGGAGACGACGACGGAGATTCCACCGCTCTGGCCAAGAAATC
CACGGTGGAGGAAGAACCACTGGATGGAGCAGAAATTGAAGAGTTCCACGAGCTTGAAGGTATTCCAATTGTTCCAAGTAACCCTAAAAGTGGTAATGATGCTGGTGTGA
TCTTCGTTCTCGAGAGAGCTTCTCTGGAGGTCGCCAAAATTGGAAAGAGTTATCAGCTGTTAAGTTCCGATCACTCCGATTTTTTGGGGAGAAATAACAGAAATCCTGGA
GATTACAGACCAGATATCTTCCATGATGCTTTGAAGGCTATTTTTGATAGCCGCATAGCAAAGGCGGGGAGGTTGAAAGCTGTTTATGTGAAAACTGAGAAAGGTTTATT
GATTGAAATTAAACCATATGTTCGTCCGCCGAGGACGCAAAAACGGTTTTATGGACTTATGTCGCAATTGCTACAGAAGTTAAGCATTACAGCTACTAGCAAGCGTGAGA
AACTTTTCCGGGTGATAAAGAATCCTATAACTCAGTATTTACCTGCCAATTCTCATAAGATGGGCTTCTCACACAGTTCAAACAAGTTGGTCAGGATGCGGAATTATCTC
GATGCTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGTTATGGCTCATGGGAAAATTGAGATGGATTACACAGATGATCTTCTAGCAATTTCTGAATATCCCCT
CAGTGCTGATTGCTGTATTGGGGAAATTTGCAAGGATTTGGCAGATAAATGGGATATATGGTGA
mRNA sequenceShow/hide mRNA sequence
GGCTTTTCGGTTTTTATTATGACCCGTAGCCATTATAAATTTTCAAGGGTTTAGAGTTGCATCGAACTTTGGACGACGATCCATAAACACCAAACACAACACAATGGTTC
GACCATTAGCGGCGAAAGGGAAGAAGAGAAAGAACAGAGAGAAATACGACAGAGTCGACGGCGGAGACGACGACGGAGATTCCACCGCTCTGGCCAAGAAATCCACGGTG
GAGGAAGAACCACTGGATGGAGCAGAAATTGAAGAGTTCCACGAGCTTGAAGGTATTCCAATTGTTCCAAGTAACCCTAAAAGTGGTAATGATGCTGGTGTGATCTTCGT
TCTCGAGAGAGCTTCTCTGGAGGTCGCCAAAATTGGAAAGAGTTATCAGCTGTTAAGTTCCGATCACTCCGATTTTTTGGGGAGAAATAACAGAAATCCTGGAGATTACA
GACCAGATATCTTCCATGATGCTTTGAAGGCTATTTTTGATAGCCGCATAGCAAAGGCGGGGAGGTTGAAAGCTGTTTATGTGAAAACTGAGAAAGGTTTATTGATTGAA
ATTAAACCATATGTTCGTCCGCCGAGGACGCAAAAACGGTTTTATGGACTTATGTCGCAATTGCTACAGAAGTTAAGCATTACAGCTACTAGCAAGCGTGAGAAACTTTT
CCGGGTGATAAAGAATCCTATAACTCAGTATTTACCTGCCAATTCTCATAAGATGGGCTTCTCACACAGTTCAAACAAGTTGGTCAGGATGCGGAATTATCTCGATGCTG
TCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGTTATGGCTCATGGGAAAATTGAGATGGATTACACAGATGATCTTCTAGCAATTTCTGAATATCCCCTCAGTGCT
GATTGCTGTATTGGGGAAATTTGCAAGGATTTGGCAGATAAATGGGATATATGGTGAACCATGCTTACCAACTCTGCATCAAATTAAGTTTGAAAGCCTGTGACTCAACT
GCATTGTTTCTTATTTTTAGTATTATTATTACTATTATTATTATAGTCATTATTTAAGAAATGGTCTGTAGAGTTTATAGGTGTTTTACGTTGGAACCATAATAGAAGAT
TCAATTTTATTTTTTTTCTTGCTTCGAAGAGATTAATTGTATTGACGAATTAAGCTCTACCATAGGTATTTTTTGTGTAGCTAATTCTTAATCGATTCTTTTTT
Protein sequenceShow/hide protein sequence
MVRPLAAKGKKRKNREKYDRVDGGDDDGDSTALAKKSTVEEEPLDGAEIEEFHELEGIPIVPSNPKSGNDAGVIFVLERASLEVAKIGKSYQLLSSDHSDFLGRNNRNPG
DYRPDIFHDALKAIFDSRIAKAGRLKAVYVKTEKGLLIEIKPYVRPPRTQKRFYGLMSQLLQKLSITATSKREKLFRVIKNPITQYLPANSHKMGFSHSSNKLVRMRNYL
DAVKDDVDLVFVVGVMAHGKIEMDYTDDLLAISEYPLSADCCIGEICKDLADKWDIW