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Sed0003773 (gene) of Chayote v1 genome

Gene IDSed0003773
OrganismSechium edule (Chayote v1)
DescriptionSynechocystis YCF37
Genome locationLG05:43016607..43017324
RNA-Seq ExpressionSed0003773
SyntenySed0003773
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148045.1 uncharacterized protein LOC101208092 [Cucumis sativus]6.8e-5783.33Show/hide
Query:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI
        MAST ISP LQILRPRCRL+ TVRAAAV SP E      TRRQ LLFLTA  A AAVVGRENPSMAEDIPLFGLRKKLKK E EAEEIVREGFEAAEKG+
Subjt:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI

Query:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        ETAER IV AE+G+ AAER IE+AEKEIE+A+NFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
Subjt:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

XP_022158696.1 uncharacterized protein LOC111025160 [Momordica charantia]3.4e-5682.04Show/hide
Query:  MASTISPILQILRPRCRLATTVRAAAVTSPPEY----PTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE
        MAST SPILQILRPRCR+ TTVRAA V   PE      TRRQALLF TA AA AA   RENPSMAEDIPLFGLRKKLKK E EAEEIVREGFEAAEKGIE
Subjt:  MASTISPILQILRPRCRLATTVRAAAVTSPPEY----PTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE

Query:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        TAER IV AE+G++AAER IE+AEKEIE+ALNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

XP_022928047.1 uncharacterized protein LOC111434949 [Cucurbita moschata]8.9e-5781.93Show/hide
Query:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE
        MASTISPILQIL+PRCRL  TVRAA+V  PPE      TRRQ LL LTA  A AAVVGRENPSMAEDIPLFGLRKKLKK E EAEEIVREGFEAAEKG+E
Subjt:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE

Query:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ
        TAER IV AE+G+  AERGIE+AEKEIESA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Subjt:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ

XP_022971729.1 uncharacterized protein LOC111470397 [Cucurbita maxima]2.3e-5782.04Show/hide
Query:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE
        MASTISPILQIL+PRCRL  TVRAA+V  PPE      TRRQ LL LTA  A AAVVGRENPSMAE+IPLFGLRKKLKK E EAEEIVREGFEAAEKG+E
Subjt:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE

Query:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        TAER IV AE+G+  AERGIE+AEKEIESA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

XP_038900735.1 uncharacterized protein LOC120087852 [Benincasa hispida]6.2e-5883.33Show/hide
Query:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI
        MAST ISP+LQIL  RCRL  TVRAAAV S PE      TRRQ LLFLTA AAAAAVVGRENPS+AEDIPLFGLRKKLKK E EAEEIVREGFEAAEKG+
Subjt:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI

Query:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        ETAER IV AEQG+ AAERGIE+AEKEIE+A+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

TrEMBL top hitse value%identityAlignment
A0A0A0LJU7 Uncharacterized protein3.3e-5783.33Show/hide
Query:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI
        MAST ISP LQILRPRCRL+ TVRAAAV SP E      TRRQ LLFLTA  A AAVVGRENPSMAEDIPLFGLRKKLKK E EAEEIVREGFEAAEKG+
Subjt:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI

Query:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        ETAER IV AE+G+ AAER IE+AEKEIE+A+NFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
Subjt:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

A0A5D3CRC5 Synechocystis YCF371.8e-5581.55Show/hide
Query:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI
        MAST ISP LQILRPRCRL+ TVRAAAV  P E      TRRQ LLFLT   A AAVVGRENPSMAEDIPLFGLRKKLKK E EAEEIVREGFEAAEKG+
Subjt:  MAST-ISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGI

Query:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        ETAER IV AE+G+ AAER IE+AEKEIE+A++FGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
Subjt:  ETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

A0A6J1E1P9 uncharacterized protein LOC1110251601.6e-5682.04Show/hide
Query:  MASTISPILQILRPRCRLATTVRAAAVTSPPEY----PTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE
        MAST SPILQILRPRCR+ TTVRAA V   PE      TRRQALLF TA AA AA   RENPSMAEDIPLFGLRKKLKK E EAEEIVREGFEAAEKGIE
Subjt:  MASTISPILQILRPRCRLATTVRAAAVTSPPEY----PTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE

Query:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        TAER IV AE+G++AAER IE+AEKEIE+ALNFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

A0A6J1EIT8 uncharacterized protein LOC1114349494.3e-5781.93Show/hide
Query:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE
        MASTISPILQIL+PRCRL  TVRAA+V  PPE      TRRQ LL LTA  A AAVVGRENPSMAEDIPLFGLRKKLKK E EAEEIVREGFEAAEKG+E
Subjt:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE

Query:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ
        TAER IV AE+G+  AERGIE+AEKEIESA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Subjt:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ

A0A6J1I9D9 uncharacterized protein LOC1114703971.1e-5782.04Show/hide
Query:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE
        MASTISPILQIL+PRCRL  TVRAA+V  PPE      TRRQ LL LTA  A AAVVGRENPSMAE+IPLFGLRKKLKK E EAEEIVREGFEAAEKG+E
Subjt:  MASTISPILQILRPRCRLATTVRAAAVTSPPE----YPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIE

Query:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
        TAER IV AE+G+  AERGIE+AEKEIESA+NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Subjt:  TAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23670.1 homolog of Synechocystis YCF378.1e-3253.71Show/hide
Query:  MASTISPIL-----QILRPRC-RLATTVRAAAVTSPPEY-------PTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREG
        MAST+S  L       L+ RC R A     AA ++ P          +RR  L  LT   AA  V G +  SMAE+IPLFG+RKKLKKAE EA EIV+EG
Subjt:  MASTISPIL-----QILRPRC-RLATTVRAAAVTSPPEY-------PTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREG

Query:  FEAAEKGIETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ
        FE AEKG++       AAE+G++AAERG+E+AEKEI +A++F  L+QAGAV  AE VGVL+ATS+VNGILGPE Q
Subjt:  FEAAEKGIETAEREIVAAEQGMKAAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCACAATCTCACCCATCCTCCAAATCCTCCGACCACGATGCCGATTAGCCACCACCGTCCGCGCCGCCGCAGTCACCTCCCCGCCGGAATATCCAACGCGCCG
ACAGGCACTATTGTTTCTGACCGCGGGAGCGGCGGCGGCGGCGGTCGTGGGGAGAGAGAATCCTTCAATGGCGGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGA
AGAAGGCGGAGGCGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGAATCGAGACGGCGGAGAGGGAGATCGTGGCGGCGGAGCAGGGGATGAAG
GCGGCGGAGAGAGGGATTGAATCGGCGGAGAAAGAGATCGAATCGGCGCTGAATTTCGGAGCGCTATCGCAGGCTGGGGCCGTCGCCGGAGCTGAGGTCGTCGGAGTTCT
CATTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGTCAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
GAAATTTGCTCCAAACAACTTCACAGTGGGAGAGAGAAAAAGCAATGGCCTCCACAATCTCACCCATCCTCCAAATCCTCCGACCACGATGCCGATTAGCCACCACCGTC
CGCGCCGCCGCAGTCACCTCCCCGCCGGAATATCCAACGCGCCGACAGGCACTATTGTTTCTGACCGCGGGAGCGGCGGCGGCGGCGGTCGTGGGGAGAGAGAATCCTTC
AATGGCGGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAGGCGGAGGCGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGAATCG
AGACGGCGGAGAGGGAGATCGTGGCGGCGGAGCAGGGGATGAAGGCGGCGGAGAGAGGGATTGAATCGGCGGAGAAAGAGATCGAATCGGCGCTGAATTTCGGAGCGCTA
TCGCAGGCTGGGGCCGTCGCCGGAGCTGAGGTCGTCGGAGTTCTCATTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGTCAGAGTTGAATTAAATGTGTATT
TTTATGAAATTCAGTATTCTGTTTTTCGGTCTTTTTTTTTTTTTTTTCCCTACTGCTTTCTTGCTCGGGTTTGTGTTCATAATTGTTAATTAATGCAAATGCTGAAGTAA
TATAATATTTGCTTAATTACTTTCTCTTGCAAATGATGATAAATGTAGTGAATTTGAA
Protein sequenceShow/hide protein sequence
MASTISPILQILRPRCRLATTVRAAAVTSPPEYPTRRQALLFLTAGAAAAAVVGRENPSMAEDIPLFGLRKKLKKAEAEAEEIVREGFEAAEKGIETAEREIVAAEQGMK
AAERGIESAEKEIESALNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS