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Sed0003787 (gene) of Chayote v1 genome

Gene IDSed0003787
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR13-like
Genome locationLG05:12049656..12050358
RNA-Seq ExpressionSed0003787
SyntenySed0003787
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605917.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3372.88Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADD-DGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFF
        MAPS  KMATR RRN+   KL KKIKKTT  K Q+   QIP  Q   VQF   DD  GGG STPKAERFRIPEILTCPP PKKQR +SDC FRRSPIAFF
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADD-DGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFF

Query:  APPELELFFFGALPDISV
        APPELELFFF A PDISV
Subjt:  APPELELFFFGALPDISV

KAG7035865.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-3471.9Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADDD----GGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPI
        MAPS  KMATR RRN+   KL KKIKKTT  K Q+   QIP  Q   VQF   DDD    GGG STPKAERFRIPEILTCPP PKKQR +SDC FRRSPI
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADDD----GGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPI

Query:  AFFAPPELELFFFGALPDISV
        AFFAPPELELFFF A PDISV
Subjt:  AFFAPPELELFFFGALPDISV

XP_022958378.1 cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita moschata]1.8e-3575.44Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPE
        MAPS AKMATR RRN+   K+ KKIKKTT  K Q QIP  Q   VQF   DD GGG STPKAERFRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPE
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPE

Query:  LELFFFGALPDISV
        LELFFF A PDISV
Subjt:  LELFFFGALPDISV

XP_023532997.1 cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita pepo subsp. pepo]3.1e-3274.55Show/hide
Query:  MATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELF
        MATR RRN+   KL KKIKKTT  K Q+   QIP  Q   VQF   DDDGGG STPKAERFRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPELELF
Subjt:  MATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELF

Query:  FFGALPDISV
        FF A PDISV
Subjt:  FFGALPDISV

XP_038902266.1 cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida]1.8e-3276.58Show/hide
Query:  MATRTRRNLPALKLKKKIKKTTAAKKQKQIPAT-QCHAVQFS-TADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFF
        MATRTRRNLP LKL KKIKKT   ++Q QIPAT Q   VQF+    D  GGCSTPKAER RIPEILTCPPAPKK RAVSDC FRRSPIAFFAPPELELFF
Subjt:  MATRTRRNLPALKLKKKIKKTTAAKKQKQIPAT-QCHAVQFS-TADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFF

Query:  FGAL--PDISV
        F +L  PDISV
Subjt:  FGAL--PDISV

TrEMBL top hitse value%identityAlignment
A0A0A0L0Q1 Uncharacterized protein2.8e-3171.31Show/hide
Query:  MAPSAAKMATR-TRRNLPALKLKKKIKKTTAAKKQKQ-----IPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIA
        MAPS A+MATR TRR LP LKL KKIKKTT  K+  Q     +P TQ   V+F     D GGCSTPKAER RIPEILTCPPAPKK RAVSDC  RRSPIA
Subjt:  MAPSAAKMATR-TRRNLPALKLKKKIKKTTAAKKQKQ-----IPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIA

Query:  FFAPPELELFFFGAL--PDISV
        FFAPPELELFFF AL  PDISV
Subjt:  FFAPPELELFFFGAL--PDISV

A0A6J1D3Z6 cyclin-dependent protein kinase inhibitor SMR15-like1.7e-3171.3Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK-QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPP
        MAPS  +MA RTR N  +LKL KK+KKT   ++QK   PAT+   VQ S  DD  GGCSTP+AERFRIPEI+TCPPAPKKQR VSDC FRRSPIAFFAPP
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK-QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPP

Query:  ELELFFFGALPDISV
        ELELFFF ALPDI V
Subjt:  ELELFFFGALPDISV

A0A6J1H2X7 cyclin-dependent protein kinase inhibitor SMR13-like8.5e-3675.44Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPE
        MAPS AKMATR RRN+   K+ KKIKKTT  K Q QIP  Q   VQF   DD GGG STPKAERFRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPE
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPE

Query:  LELFFFGALPDISV
        LELFFF A PDISV
Subjt:  LELFFFGALPDISV

A0A6J1JET4 cyclin-dependent protein kinase inhibitor SMR135.4e-3068.85Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQ-----KQIPAT-QCHAVQFS-TADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPI
        MAPS  KMATRTR NLP LKL KKIKKT   ++Q     KQIPA     AV F+    D  GGCSTPKAERFRIPEILTCPPAPKK R  SDC  RRSPI
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQ-----KQIPAT-QCHAVQFS-TADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPI

Query:  AFFAPPELELFFFG-ALPDISV
        AFFAPPELELFF    +PDISV
Subjt:  AFFAPPELELFFFG-ALPDISV

A0A6J1K7R4 cyclin-dependent protein kinase inhibitor SMR9-like4.9e-3171.05Show/hide
Query:  MATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFS----TADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPE
        MATR RRN+P  KL KK+KKTT  K Q+   QIP  Q   VQF       DD GGG STPKAERFRIPEILTCPP PKKQR VSDC FRRSPIAFFAPPE
Subjt:  MATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFS----TADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPE

Query:  LELFFFGALPDISV
        LELFFF + PDISV
Subjt:  LELFFFGALPDISV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR134.0e-1443.64Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK--QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAP
        MA   A+   R  + L     KK++ +           +P+    AV  S      GGC TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAP
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK--QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAP

Query:  PELELFFFGA
        PE+ELFF  A
Subjt:  PELELFFFGA

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR154.9e-0430.77Show/hide
Query:  KKIKKTTAAKK--------QKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFF
        +K  +TT  KK           +      +   S  +D+    +TP A+  RIP ++ CPPAPKK++      +   P  FF+PP+LE  F
Subjt:  KKIKKTTAAKK--------QKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFF

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR97.5e-1364.81Show/hide
Query:  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL
        GC TP  E+ RIPE+LTCPPAPKKQ+   +C  RR  IAFFAPP++ELFF  AL
Subjt:  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL

Arabidopsis top hitse value%identityAlignment
AT1G51355.1 unknown protein5.3e-1464.81Show/hide
Query:  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL
        GC TP  E+ RIPE+LTCPPAPKKQ+   +C  RR  IAFFAPP++ELFF  AL
Subjt:  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL

AT1G60783.1 unknown protein3.5e-0530.77Show/hide
Query:  KKIKKTTAAKK--------QKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFF
        +K  +TT  KK           +      +   S  +D+    +TP A+  RIP ++ CPPAPKK++      +   P  FF+PP+LE  F
Subjt:  KKIKKTTAAKK--------QKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFF

AT3G20898.1 unknown protein2.8e-1543.64Show/hide
Query:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK--QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAP
        MA   A+   R  + L     KK++ +           +P+    AV  S      GGC TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAP
Subjt:  MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK--QIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAP

Query:  PELELFFFGA
        PE+ELFF  A
Subjt:  PELELFFFGA

AT5G02220.1 unknown protein1.0e-0439.62Show/hide
Query:  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSP--IAFFAPPELELFFF
        GC+TP++  +RIP    CPP P+K+  V     +R P    +F PP+LE  F+
Subjt:  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSP--IAFFAPPELELFFF

AT5G40460.1 unknown protein7.7e-0547.06Show/hide
Query:  STPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIA--FFAPP-ELELFF
        +TP A+  +IPE+L CPPAP+K+R    C   RS +   FF PP +LE  F
Subjt:  STPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIA--FFAPP-ELELFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCCTTCAGCAGCAAAAATGGCCACAAGAACCAGAAGAAATTTACCCGCCTTGAAGCTGAAAAAGAAAATAAAGAAGACGACGGCCGCCAAGAAACAGAAGCAGAT
TCCGGCGACGCAATGCCACGCCGTTCAATTTTCCACCGCCGACGACGACGGCGGCGGCTGCAGCACTCCGAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACATGTC
CGCCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGACTGCTGGTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGGTGCTCTGCCT
GACATTTCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
TCCCTCTTTCTCTCTCTCTCCTCTTTCTCTCTCTAGGGTTTTGTGGGTTTCTGAAGTTCGATCCTTTTCTTTCAATGGGTATCTTCCAAAATTCCCTTAAACCCTTCTCC
TTTTAAACCAAATCCCTTACAGAGCTTCACTCTTTGCACAACCCCTGTTCCTTTACCTTTAAAAGGCTTCTAATTTGTTTTCAAACCTTGTTGTTGCCTGTTGCCTGTTC
TTGTTTTGTCCTATTTGGCCCTTTTCAGTCGAATTTCTCCACCTCTAAATCTACCCTTTTTAGCAAATTCCTCCAAAATGGCCCCTTCAGCAGCAAAAATGGCCACAAGA
ACCAGAAGAAATTTACCCGCCTTGAAGCTGAAAAAGAAAATAAAGAAGACGACGGCCGCCAAGAAACAGAAGCAGATTCCGGCGACGCAATGCCACGCCGTTCAATTTTC
CACCGCCGACGACGACGGCGGCGGCTGCAGCACTCCGAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACATGTCCGCCGGCGCCGAAGAAGCAAAGAGCCGTTTCCG
ACTGCTGGTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGGTGCTCTGCCTGACATTTCAGTTTGAATTTAAAACGCTAATCAA
ACCTGGTGTGTTTATACAAATTTCACAAACATTTTTTTCCCTC
Protein sequenceShow/hide protein sequence
MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALP
DISV