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Sed0003907 (gene) of Chayote v1 genome

Gene IDSed0003907
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:35412277..35412756
RNA-Seq ExpressionSed0003907
SyntenySed0003907
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1219398.1 hypothetical protein CJ030_MR3G001119 [Morella rubra]3.0e-0940.19Show/hide
Query:  TGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAI
        T D E Q+ P ++ A + ++W  +++AFC AS ++IA  S+QIQ+ LP+  HLLS+A++  F     AK V  +   A+++L  +  F     FFLAIAI
Subjt:  TGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAI

Query:  PYSFHFQ
        P   HFQ
Subjt:  PYSFHFQ

KAB1219415.1 hypothetical protein CJ030_MR3G001102 [Morella rubra]2.0e-0838.32Show/hide
Query:  TGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAI
        T D E Q+ P ++ A + ++W+N+++AFC AS ++IA  S+QI + LP+  HLLS+A++  F     AK V  +   A+++L  +  F     FFLAIAI
Subjt:  TGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAI

Query:  PYSFHFQ
        P   H +
Subjt:  PYSFHFQ

KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]1.5e-1144.94Show/hide
Query:  AAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPY
        AAE + +W++M++ FC +S I IATVSV I+T+LP  F LLS+A++ CF     A++++   +  S+ILYC+GG  + ++ F+A AIPY
Subjt:  AAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1951.75Show/hide
Query:  AAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPYSFHFQVIILL
        AAAE + +W++M++AFC +S I IATVSVQI+ KLP +F+ LS+ L+ CFGF A  K+     +R S+ILYC+GG   +TA F+A AIPY+ +FQ+II L
Subjt:  AAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPYSFHFQVIILL

Query:  IYLTF-LFTTFISH
        IYL F L    ++H
Subjt:  IYLTF-LFTTFISH

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]7.2e-2753.95Show/hide
Query:  FLEIFSRASTLFVSS-------LLSDQLTGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVH
        F E  SRA    V++       L+  +  G  E Q +P+ +A E LMQWENMM+ FC  + I IATVSVQIQTKL  MF  LS ALM CF FT +AKL+ 
Subjt:  FLEIFSRASTLFVSS-------LLSDQLTGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVH

Query:  HQTQRASQILYCIGGFWFITAFFLAIAIPYSFHFQVIILLIYLTFLFTTFIS
        H  QR S ILY +GGF F+TAFF+AIAIPY+FHFQ++ L +YL FLF    S
Subjt:  HQTQRASQILYCIGGFWFITAFFLAIAIPYSFHFQVIILLIYLTFLFTTFIS

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein7.0e-1241.18Show/hide
Query:  QQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPYSFHFQ
        ++ L   AE + + + M++ FC +S I IATVSVQ +TKLP  F  LS+A++ CF     A+++    +  S+ILYC GGF   T  F+A AIPY  HF 
Subjt:  QQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPYSFHFQ

Query:  VIILLIYLTF--LFTTFIS
        +I++++Y  F  +F   IS
Subjt:  VIILLIYLTF--LFTTFIS

A0A0A0LQB6 Uncharacterized protein3.6e-1640.97Show/hide
Query:  CFLEIFSRASTLFVSSLLSDQLTGDH-EQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQT--KLPVMFHLLSVALMSCFGFTATAKLVHHQT
        C++    R +     SL  ++ +GD      + L   AE + +W+ M++A C +S I IATVSVQI+T  +LP  F  LS+ ++ CFGF   AK+     
Subjt:  CFLEIFSRASTLFVSSLLSDQLTGDH-EQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQT--KLPVMFHLLSVALMSCFGFTATAKLVHHQT

Query:  QRASQILYCIGGFWFITAFFLAIAIPYSFHFQVIILLIYLTFLF
        +  S+ILYC+GGF  +TAFF+A AIP++ +FQ+II ++YL F F
Subjt:  QRASQILYCIGGFWFITAFFLAIAIPYSFHFQVIILLIYLTFLF

A0A0A0LSX4 Uncharacterized protein4.1e-1244.09Show/hide
Query:  AAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPYSFHF
        AAE + +W++M++ FC +S I IATVSV I+T+LP  F LLS+A++ CF     A++++   +  S+ILYC+GG  + ++ F+A AIPY+  F
Subjt:  AAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAIPYSFHF

A0A6A1W6S8 Uncharacterized protein1.5e-0940.19Show/hide
Query:  TGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAI
        T D E Q+ P ++ A + ++W  +++AFC AS ++IA  S+QIQ+ LP+  HLLS+A++  F     AK V  +   A+++L  +  F     FFLAIAI
Subjt:  TGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLAIAI

Query:  PYSFHFQ
        P   HFQ
Subjt:  PYSFHFQ

A0A7N2R866 Uncharacterized protein1.6e-1137.61Show/hide
Query:  QLTGD-HEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLA
        Q TGD  E+Q +         M+W  +++AFC AS + IA +SVQ+ T+LP +FHL S+A++  F     +K ++ +  RA+Q+L   G F+ +TAFF+A
Subjt:  QLTGD-HEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRASQILYCIGGFWFITAFFLA

Query:  IAIPYSFHFQVIILLIY
        I IP+ F+ +    ++Y
Subjt:  IAIPYSFHFQVIILLIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGACTCATGAGTGCCTTGAAAACTTGTTTTCTCGAGATCTTCTCAAGAGCAAGCACATTGTTTGTTAGTTCGTTATTGTCCGATCAACTCACAGGCGACCACGA
GCAGCAGCAGCAGCCTCTGGCGGCCGCGGCGGAGAGGTTAATGCAATGGGAAAATATGATGCTAGCATTTTGTGCAGCCTCCGTCATTACCATAGCCACTGTGTCAGTCC
AAATTCAAACCAAGCTGCCTGTCATGTTTCATTTACTGTCGGTTGCGTTGATGAGCTGCTTTGGTTTCACAGCCACAGCCAAACTCGTTCACCACCAAACCCAAAGGGCT
TCCCAAATTCTCTACTGTATTGGTGGGTTTTGGTTCATCACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCCTTCCACTTTCAAGTTATAATCTTGCTCATCTATCT
CACGTTTTTGTTCACGACTTTTATCTCCCATTTCACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGACTCATGAGTGCCTTGAAAACTTGTTTTCTCGAGATCTTCTCAAGAGCAAGCACATTGTTTGTTAGTTCGTTATTGTCCGATCAACTCACAGGCGACCACGA
GCAGCAGCAGCAGCCTCTGGCGGCCGCGGCGGAGAGGTTAATGCAATGGGAAAATATGATGCTAGCATTTTGTGCAGCCTCCGTCATTACCATAGCCACTGTGTCAGTCC
AAATTCAAACCAAGCTGCCTGTCATGTTTCATTTACTGTCGGTTGCGTTGATGAGCTGCTTTGGTTTCACAGCCACAGCCAAACTCGTTCACCACCAAACCCAAAGGGCT
TCCCAAATTCTCTACTGTATTGGTGGGTTTTGGTTCATCACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCCTTCCACTTTCAAGTTATAATCTTGCTCATCTATCT
CACGTTTTTGTTCACGACTTTTATCTCCCATTTCACGTAA
Protein sequenceShow/hide protein sequence
MGRLMSALKTCFLEIFSRASTLFVSSLLSDQLTGDHEQQQQPLAAAAERLMQWENMMLAFCAASVITIATVSVQIQTKLPVMFHLLSVALMSCFGFTATAKLVHHQTQRA
SQILYCIGGFWFITAFFLAIAIPYSFHFQVIILLIYLTFLFTTFISHFT