; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003913 (gene) of Chayote v1 genome

Gene IDSed0003913
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S10-1-like
Genome locationLG07:13008491..13010812
RNA-Seq ExpressionSed0003913
SyntenySed0003913
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022931372.1 40S ribosomal protein S10-1-like [Cucurbita moschata]1.6e-9196.11Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCFAKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAA+S+
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS

XP_022942965.1 40S ribosomal protein S10-1-like [Cucurbita moschata]2.8e-9195.63Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGG-GAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GG GA ASSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGG-GAAASSNL

XP_022982956.1 40S ribosomal protein S10-1-like [Cucurbita maxima]2.8e-9196.15Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGA ASSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL

XP_022985005.1 40S ribosomal protein S10-1-like [Cucurbita maxima]9.6e-9296.7Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAAASSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL

XP_023553253.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo]4.3e-9297.25Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCFAKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAAASSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL

TrEMBL top hitse value%identityAlignment
A0A0A0KUQ3 S10_plectin domain-containing protein5.1e-9195.6Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAA SSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL

A0A6J1EYG0 40S ribosomal protein S10-1-like7.9e-9296.11Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCFAKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAA+S+
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS

A0A6J1FX77 40S ribosomal protein S10-1-like1.3e-9195.63Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGG-GAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GG GA ASSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGG-GAAASSNL

A0A6J1J0T0 40S ribosomal protein S10-1-like1.3e-9196.15Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGA ASSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL

A0A6J1JA51 40S ribosomal protein S10-1-like4.6e-9296.7Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVC+AKKDYNL KHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL
        PFGG  GDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGS+ GGGAAASSNL
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNL

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-11.0e-7277.9Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV +AKKDYNL KHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS
        PFG G  GDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G   G G  +SS
Subjt:  PFG-GASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS

P0DKK9 40S ribosomal protein S10-21.0e-7277.9Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV +AKKDYNL KHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS
        PFG G  GDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G   G G  +SS
Subjt:  PFG-GASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASS

Q9FFS8 40S ribosomal protein S10-21.2e-6881.32Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV FAKKD+NLP+HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAAAS
        RPFGG  GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG F GGGAA S
Subjt:  RPFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAAAS

Q9LTF2 40S ribosomal protein S10-32.4e-6978.33Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS
        PFGG  GDR RG PR EGG+R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG +S    + S
Subjt:  PFGGASGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS

Q9SW09 40S ribosomal protein S10-13.6e-7378.77Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVCFAKKD+NLPKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS
        PFGG  GDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG +S    + S
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein2.5e-7478.77Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVCFAKKD+NLPKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS
        PFGG  GDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG +S    + S
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein1.1e-5867.6Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVCFAKKD+NLPKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS
        PF                            GGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG +S    + S
Subjt:  PFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein8.4e-7081.32Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV FAKKD+NLP+HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAAAS
        RPFGG  GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG F GGGAA S
Subjt:  RPFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAAAS

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein1.8e-4880.88Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKG
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK 
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKG

Query:  GAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAAAS
        GAPADY+P F GG GG R GFGRGAG F GGGAA S
Subjt:  GAPADYRPSF-GGPGG-RPGFGRGAGSFSGGGAAAS

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein1.7e-7078.33Show/hide
Query:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGASGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS
        PFGG  GDR RG PR EGG+R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG +S    + S
Subjt:  PFGGASGDRPRGPPRFEGGER-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATTTCAGAGAAGAATCGCAGGGAGATTTCCAAGTACCTCTTTCAAGAGGGGGTTTGCTTTGCCAAGAAAGATTACAATCTGCCCAAGCACCCCGAAATCGATGT
GCCCAATCTCCAGGTTATTAAGCTCATGCAGAGCTTCAAGTCCAAGGAGTATGTGCGCGAGACTTTTGCTTGGATGCACTACTACTGGTACCTCACCAATGATGGCATTG
AGTTCCTTAGGACTTACCTCAATCTTCCCTCCGAAATTGTCCCCGCTACCTTGAAAAAACAAGCTAAGCCTGCGGGCAGACCCTTCGGTGGAGCTTCCGGTGATCGCCCC
CGGGGTCCACCTCGGTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGAGATGGTTACCGTGGAGGTCCTCGTGGACCAGCCGGTGAGTTTGGTGGTGACAAGGGAGGAGC
TCCTGCTGATTACAGACCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTCGGTCGTGGAGCGGGTAGCTTTAGTGGAGGAGGAGCTGCAGCAAGCTCAAATCTTACTT
GA
mRNA sequenceShow/hide mRNA sequence
CCAGAGACTCATTAACATCTACAAACCCTAACCGCTCCCAACTTCTTCTTCAATTCACGTCTGCGCTTACTCTCATTGTAGAAGCCTCTCTCGCATCTGTTCTTGCTCAA
CTTCAACCATGATCATTTCAGAGAAGAATCGCAGGGAGATTTCCAAGTACCTCTTTCAAGAGGGGGTTTGCTTTGCCAAGAAAGATTACAATCTGCCCAAGCACCCCGAA
ATCGATGTGCCCAATCTCCAGGTTATTAAGCTCATGCAGAGCTTCAAGTCCAAGGAGTATGTGCGCGAGACTTTTGCTTGGATGCACTACTACTGGTACCTCACCAATGA
TGGCATTGAGTTCCTTAGGACTTACCTCAATCTTCCCTCCGAAATTGTCCCCGCTACCTTGAAAAAACAAGCTAAGCCTGCGGGCAGACCCTTCGGTGGAGCTTCCGGTG
ATCGCCCCCGGGGTCCACCTCGGTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGAGATGGTTACCGTGGAGGTCCTCGTGGACCAGCCGGTGAGTTTGGTGGTGACAAG
GGAGGAGCTCCTGCTGATTACAGACCTTCTTTTGGGGGTCCTGGTGGAAGACCGGGTTTCGGTCGTGGAGCGGGTAGCTTTAGTGGAGGAGGAGCTGCAGCAAGCTCAAA
TCTTACTTGAAACAGATGGTCGTATGAGCAGTTTAATGAATTTTGATTGGGAATGAGTCGGGATCTTGAATGAAGATCGACTGTCGAGAGAATGAGGAAGCAAACATCTT
AAGCAGATTCTTATTGTTACAATTAAGCAGGTTCTTATTCGTTCCCGTGTTTTTTTTGTTTTGATTTATGTTTATGGATTTTTTTGAGGTAAAGTTAATGTTGTTTTTCA
CAATTGTGTTGTCATATTTTTTAGCTAAAGTTCATGTTTAACAATAAACACTCTTCATATCCATGATCTATCTTCACTTCAAGACAAGATTTTAGCTATTGGCAAATTCC
ACGAAGATCGGAACTTTCTACTGTTGAGTTTACATTCTAA
Protein sequenceShow/hide protein sequence
MIISEKNRREISKYLFQEGVCFAKKDYNLPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGASGDRP
RGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFSGGGAAASSNLT