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Sed0003923 (gene) of Chayote v1 genome

Gene IDSed0003923
OrganismSechium edule (Chayote v1)
DescriptionCTTNBP 2 amino-terminal-like protein
Genome locationLG05:32970918..32975499
RNA-Seq ExpressionSed0003923
SyntenySed0003923
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031590.1 uncharacterized protein E6C27_scaffold139G003580 [Cucumis melo var. makuwa]1.3e-5780Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG +QKWG+IAPA  A   +NPEREEYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EA MVFD K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS
        VSVLMPGEE+PTYIAHPAPAPCPPEPILKPLHQH+LS+CPSS ++
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS

XP_004137014.1 uncharacterized protein LOC101213979 [Cucumis sativus]1.7e-5781.69Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG +QKWG+IAPA  A   +NPEREEYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EA MVFD K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS
        VSVLMPGEE+PTYIAHPAPAPCPPEPILKPLHQH+LS+CPSS
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS

XP_022952119.1 uncharacterized protein LOC111454885 isoform X1 [Cucurbita moschata]4.1e-5679.58Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG DQKW +IAPA  A   +NPER+EYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EAHM+ D K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS
        VSVLMPGEE+PTYIAHPAPAPCPPEPILKPLHQHNLS+C S+
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS

XP_022988986.1 uncharacterized protein LOC111486185 isoform X1 [Cucurbita maxima]1.4e-5680.99Show/hide
Query:  MGVDQKWGSIA-PATAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG +Q+WG IA P  A   +NPEREEYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR R+ A   R  SD+EA MVFDEKL YPSPKMTVYGRG
Subjt:  MGVDQKWGSIA-PATAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS
        VSVLMPGEE+PTYIAHP PAPCPPEPILKPLHQHNLSICP S
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS

XP_038887855.1 uncharacterized protein LOC120077851 [Benincasa hispida]2.2e-5781.69Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG +QKWG+IAPA  A   +NPEREEYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EA MVFD K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS
        VSVLMPGEE+PTYIAHP PAPCPPEPILKPLHQH+LSICPSS
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS

TrEMBL top hitse value%identityAlignment
A0A0A0K2A7 Uncharacterized protein8.1e-5881.69Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG +QKWG+IAPA  A   +NPEREEYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EA MVFD K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS
        VSVLMPGEE+PTYIAHPAPAPCPPEPILKPLHQH+LS+CPSS
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS

A0A5D3C6W5 Uncharacterized protein6.2e-5880Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG +QKWG+IAPA  A   +NPEREEYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EA MVFD K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS
        VSVLMPGEE+PTYIAHPAPAPCPPEPILKPLHQH+LS+CPSS ++
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS

A0A6J1GKP8 uncharacterized protein LOC111454885 isoform X12.0e-5679.58Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG DQKW +IAPA  A   +NPER+EYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EAHM+ D K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS
        VSVLMPGEE+PTYIAHPAPAPCPPEPILKPLHQHNLS+C S+
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS

A0A6J1HXD4 uncharacterized protein LOC111468338 isoform X11.3e-5578.77Show/hide
Query:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG DQKW +IAPA  A   +NPER+EYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR RSPA   R  SD+EA M+ D K  YPSPKMTVY RG
Subjt:  MGVDQKWGSIAPA-TAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSIC-PSSRTS
        VSVLMPGEE+PTYIAHPAPAPCPPEPILKPLHQHNLS+C P+S TS
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSIC-PSSRTS

A0A6J1JIR2 uncharacterized protein LOC111486185 isoform X16.8e-5780.99Show/hide
Query:  MGVDQKWGSIA-PATAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG
        MG +Q+WG IA P  A   +NPEREEYW RFDDSVNAVSFGFVAT ILISMFLVMAIFERFLR R+ A   R  SD+EA MVFDEKL YPSPKMTVYGRG
Subjt:  MGVDQKWGSIA-PATAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRG

Query:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS
        VSVLMPGEE+PTYIAHP PAPCPPEPILKPLHQHNLSICP S
Subjt:  VSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11120.1 unknown protein3.5e-2948.15Show/hide
Query:  MNPEREEYWR-RFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVT------SRLTSDVEAHMVFD---EKLPYPSPK----------------
        MN  REE W+ +FDDSVNAVSFGFVAT ILISMFLVMAIFER +R+ + + T      SR+   +++ + F+    KL Y SPK                
Subjt:  MNPEREEYWR-RFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVT------SRLTSDVEAHMVFD---EKLPYPSPK----------------

Query:  ----------MTVYGRGVSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS
                  MTVY  GVSVLMPG+++PT+IAHPAP PCPP+ I +  HQH  S   SS  S
Subjt:  ----------MTVYGRGVSVLMPGEEVPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS

AT1G11120.2 unknown protein1.8e-3357.35Show/hide
Query:  MNPEREEYWR-RFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVT------SRLTSDVEAHMVFD---EKLPYPSPKMTVYGRGVSVLMPGEE
        MN  REE W+ +FDDSVNAVSFGFVAT ILISMFLVMAIFER +R+ + + T      SR+   +++ + F+    KL Y SPKMTVY  GVSVLMPG++
Subjt:  MNPEREEYWR-RFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVT------SRLTSDVEAHMVFD---EKLPYPSPKMTVYGRGVSVLMPGEE

Query:  VPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS
        +PT+IAHPAP PCPP+ I +  HQH  S   SS  S
Subjt:  VPTYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTS

AT1G58007.1 unknown protein4.6e-1345.45Show/hide
Query:  SVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRGVSVLMPGEEVPTYIAHPAPAPCPPEPILKPLH
        S+NA+SFGFVAT ILI MF++MAI E   RS   +     + DV+    F +KL   +  + V    VSV+MPG+++P+Y+A PAP PC  E I  P H
Subjt:  SVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRGVSVLMPGEEVPTYIAHPAPAPCPPEPILKPLH

AT1G58007.2 unknown protein4.6e-1345.45Show/hide
Query:  SVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRGVSVLMPGEEVPTYIAHPAPAPCPPEPILKPLH
        S+NA+SFGFVAT ILI MF++MAI E   RS   +     + DV+    F +KL   +  + V    VSV+MPG+++P+Y+A PAP PC  E I  P H
Subjt:  SVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRGVSVLMPGEEVPTYIAHPAPAPCPPEPILKPLH

AT4G28170.1 unknown protein6.4e-1549.5Show/hide
Query:  EEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKL-PYPSPKMTVYGRGVSVLMPGEEVPTYIAHPAPAPCP
        EE   RF+ SVNAV FG VAT +LI++FL++A FERF+  + P  +  L          D+K  P+ SPKM V  R +SVLMPGE+VPT+IA     PCP
Subjt:  EEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKL-PYPSPKMTVYGRGVSVLMPGEEVPTYIAHPAPAPCP

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTTGACCAAAAATGGGGTTCCATTGCGCCGGCGACGGCGGCGGAGGCGATGAACCCAGAAAGGGAGGAGTATTGGAGGCGATTCGATGATTCGGTGAATGCGGT
GTCGTTTGGGTTTGTGGCTACTACCATTCTCATCTCTATGTTTCTTGTTATGGCCATTTTTGAGAGGTTTCTCCGATCCCGGTCGCCGGCGGTCACCAGCCGGCTGACTT
CCGACGTTGAAGCCCACATGGTGTTTGATGAAAAGCTTCCTTACCCATCTCCCAAGATGACAGTTTACGGTCGGGGAGTATCGGTGTTGATGCCGGGCGAAGAAGTTCCT
ACCTACATTGCGCACCCTGCTCCTGCACCGTGTCCTCCCGAGCCCATTTTGAAGCCTCTACATCAACATAACTTGAGCATCTGTCCATCCTCTAGAACATCAAGGCTCCA
ACATCAGTTGACCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCTACAAAAATATCCTTTCAAATTCTATCTTCTTTCCCTGATTGCCACATTACACTTTCGCTTTGAATCCTTTATATTCATATAAATATAATCATCTTCTCTTTCAA
CCCAATTCCCAAATCTCCAAAACCCATTTTCTCTGCAACTCTGTTCAAAAAACAGAGTGCGGGTTTGATTTTATTTGATGGGTGTTGACCAAAAATGGGGTTCCATTGCG
CCGGCGACGGCGGCGGAGGCGATGAACCCAGAAAGGGAGGAGTATTGGAGGCGATTCGATGATTCGGTGAATGCGGTGTCGTTTGGGTTTGTGGCTACTACCATTCTCAT
CTCTATGTTTCTTGTTATGGCCATTTTTGAGAGGTTTCTCCGATCCCGGTCGCCGGCGGTCACCAGCCGGCTGACTTCCGACGTTGAAGCCCACATGGTGTTTGATGAAA
AGCTTCCTTACCCATCTCCCAAGATGACAGTTTACGGTCGGGGAGTATCGGTGTTGATGCCGGGCGAAGAAGTTCCTACCTACATTGCGCACCCTGCTCCTGCACCGTGT
CCTCCCGAGCCCATTTTGAAGCCTCTACATCAACATAACTTGAGCATCTGTCCATCCTCTAGAACATCAAGGCTCCAACATCAGTTGACCTGAAAAAACATCACTATAGA
ACAAGGGTTGCCCCACACACTTTGCAATTTCAGCTCATTCAGTCTTGCAACTTGACATTCTAAAGTTAGAAAACATGGTGAAAGTCACATCAACTTCAGCAAGACTCTAA
CTTGGAAATGTAGAGCCCTCACCCTGTAGGTTACACATTTGATGATGTTGATTTGGGCCTTCTCCTGCCCCAACCAAAAAGAGAGG
Protein sequenceShow/hide protein sequence
MGVDQKWGSIAPATAAEAMNPEREEYWRRFDDSVNAVSFGFVATTILISMFLVMAIFERFLRSRSPAVTSRLTSDVEAHMVFDEKLPYPSPKMTVYGRGVSVLMPGEEVP
TYIAHPAPAPCPPEPILKPLHQHNLSICPSSRTSRLQHQLT