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Sed0003924 (gene) of Chayote v1 genome

Gene IDSed0003924
OrganismSechium edule (Chayote v1)
DescriptionSignal recognition particle 9 kDa protein
Genome locationLG01:71425901..71427820
RNA-Seq ExpressionSed0003924
SyntenySed0003924
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0045900 - negative regulation of translational elongation (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR008832 - Signal recognition particle, SRP9 subunit
IPR009018 - Signal recognition particle, SRP9/SRP14 subunit
IPR039432 - SRP9 domain
IPR039914 - Signal recognition particle SRP9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571487.1 Signal recognition particle 9 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4894.17Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFRSDP+STRY++KYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_004154105.1 signal recognition particle 9 kDa protein [Cucumis sativus]3.7e-4894.17Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFRSDP STRY+IKYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_022146059.1 signal recognition particle 9 kDa protein isoform X1 [Momordica charantia]2.8e-4894.17Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYI SWDEFV+RSVQLFRSDP+STRY+IKYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGKEQVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_022963515.1 signal recognition particle 9 kDa protein [Cucurbita moschata]2.8e-4893.2Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFRSDP+STRY++KYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

XP_038887366.1 signal recognition particle 9 kDa protein [Benincasa hispida]6.2e-4892.23Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVY+ASWDEFV+RSVQLFRSDP+STRY++KYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ2 Signal recognition particle 9 kDa protein1.8e-4894.17Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFRSDP STRY+IKYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A1S3BLU0 Signal recognition particle 9 kDa protein1.8e-4894.17Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFRSDP STRY+IKYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A5D3E2L2 Signal recognition particle 9 kDa protein1.8e-4894.17Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFRSDP STRY+IKYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A6J1CY87 Signal recognition particle 9 kDa protein1.4e-4894.17Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYI SWDEFV+RSVQLFRSDP+STRY+IKYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGKEQVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

A0A6J1HI87 Signal recognition particle 9 kDa protein1.4e-4893.2Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFV+RSVQLFRSDP+STRY++KYRHC+GKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGP+VDISEVTGK+QVDAQPTKKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

SwissProt top hitse value%identityAlignment
O04438 Signal recognition particle 9 kDa protein9.7e-4480.58Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVY+ SW+EFV+RSVQLFR DP++TRY +KYRHCEGKLVLKVTD+RECLKFKTDQAQDAKKMEKLNNIFF LM RGP+VDISEV+GKEQ + Q  KKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        R+Q
Subjt:  RKQ

P21262 Signal recognition particle 9 kDa protein7.5e-1243.84Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM
        M    +W+EF   + +L+ +DP   R  +KYRH +G L +KVTD+  CL ++TDQAQD KK+EK ++    LM
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLM

P34642 Signal recognition particle 9 kDa protein2.0e-1246.27Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNN
        M Y  SWDEF   + +L  ++P+  R+  KY H +G+LVLK+TD+  CL++ T+Q QD KK+EKL++
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNN

Q55GL2 Signal recognition particle 9 kDa protein3.5e-1753.52Show/hide
Query:  VYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTL
        +YI  WDEF D+S QL+R+DP  TR+S K+RH EGK+VLKVT++   LKF+TD+  D K+++++N++FF L
Subjt:  VYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTL

Q9SMU7 Signal recognition particle 9 kDa protein2.9e-4887.38Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFVDRSVQLFR+DP+STRY +KYRHC+GKLVLKVTDN+ECLKFKTDQAQ+AKKMEKLNNIFFTLMARGP+VD+SEVTGKEQ++ QP KKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ

Arabidopsis top hitse value%identityAlignment
AT3G49100.1 Signal recognition particle, SRP9/SRP14 subunit2.1e-4987.38Show/hide
Query:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG
        MVYIASWDEFVDRSVQLFR+DP+STRY +KYRHC+GKLVLKVTDN+ECLKFKTDQAQ+AKKMEKLNNIFFTLMARGP+VD+SEVTGKEQ++ QP KKGRG
Subjt:  MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRG

Query:  RKQ
        RKQ
Subjt:  RKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTACATTGCCTCCTGGGATGAATTCGTCGACCGTTCTGTGCAATTGTTCCGCTCCGATCCCGATTCCACGCGGTACAGCATAAAGTATCGACACTGCGAAGGGAA
ACTGGTTCTTAAGGTCACCGATAACCGCGAGTGTCTTAAGTTCAAGACCGACCAGGCACAGGACGCCAAGAAGATGGAAAAACTCAACAACATATTCTTCACTCTGATGG
CCAGGGGCCCTGAGGTGGATATATCAGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
CAAAAAAATAAAAAAATAAAAAATAAAAAATAAAAAATAAAAAGGATAGAAGGCGGGGTAGGTTATTGCACATCGGGGGGTTGTTAAAATTTGGAAGGTGGTTCCTCTCT
GCCGCAGAGCCATGGTGTACATTGCCTCCTGGGATGAATTCGTCGACCGTTCTGTGCAATTGTTCCGCTCCGATCCCGATTCCACGCGGTACAGCATAAAGTATCGACAC
TGCGAAGGGAAACTGGTTCTTAAGGTCACCGATAACCGCGAGTGTCTTAAGTTCAAGACCGACCAGGCACAGGACGCCAAGAAGATGGAAAAACTCAACAACATATTCTT
CACTCTGATGGCCAGGGGCCCTGAGGTGGATATATCAGAAGTGACGGGCAAAGAGCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGACTTCTCA
TTGACTACTGCACAAATAGGTTTCTCGTACTTCTCTAAACCCATTGATGAATTATAATCTCAATTTACTACTTTTAGTTATATTCTCTTACTTTTTTTCAGAATAGATTA
CCAAAGTTCTGGGAGTGAATTTTTACCGTATGCCGTCCCATTTTTCTTAAACATATTTGGTGTGCGGTTCGTTTTAATACATGATTTTTATTTAGGCATTTTCACAAGTT
GACATCTTGTTCTGTGCCAAAACTTCTTTATATTCTAGTTCAAAGTAATATAAGAAATTAACCACGGTTGACCCCTAGTGGTTATTTTCTTATTGGCACAAGTTAAAAAG
TAAAGGCACCCTGAATGAATGAGTTTAGGCTTCATGGTGGTCCTGGCTACCAAATATTTAAGGGTTAGATGGTTGCCCTTAAAGACTAGTCGTATTATGAGTAAGCTACT
AGAAAAATGAGTAAGCTAGTAAGAATGCTGGTGGCAGCGCAGAGTCTTTGAAGGTTCAAGGCTCACTAAGGGCCTAAGGTGCAATACTAAAAAAAACTGCCCGCTTCATG
ACATGGCGCTCAAGGCGCCTCGCCTTGAGCCAGGACTGAGCTTGAGCAAGCCTTTAAAACATTGAATGGGTCATATGATAAAAATTACTGATAACTCAAGATTCGAAGAG
TTGTTTTGCAAAGCATTTTAAATTATTATTGTCCTGCTTCCATGTAAACATGGAGATGTTTTTCTTCTCTATTTCTAATATCTTGACTTTTTTAGTTGTCCATATCCTTC
ATTGTCTAC
Protein sequenceShow/hide protein sequence
MVYIASWDEFVDRSVQLFRSDPDSTRYSIKYRHCEGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEQVDAQPTKKGRGRKQ