; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003938 (gene) of Chayote v1 genome

Gene IDSed0003938
OrganismSechium edule (Chayote v1)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationLG06:33593498..33601746
RNA-Seq ExpressionSed0003938
SyntenySed0003938
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010847.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-11670.95Show/hide
Query:  ECVIEVREAIAEMSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------
        +CV+ VRE +A+MSDEGRVHPDCRNASNPYHEC E+CFKVIAE KARNQQNEPVP SS  V+AGR SGSSNFVPPDEYED +DE+               
Subjt:  ECVIEVREAIAEMSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------

Query:  ------------------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKP
                                            +  E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAESKYKKWEK P
Subjt:  ------------------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKP

Query:  APHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHF
        AP+GWDVFNQKTL+DAYKKRTKNVNVDLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHF
Subjt:  APHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHF

Query:  NKKIERAFGRYTLEIKNNLERGTALPD
        NKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  NKKIERAFGRYTLEIKNNLERGTALPD

KAG7027023.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-11169.57Show/hide
Query:  VREAIAEMSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDERLDK-----------------
        VR+ +AEMSDEGRVHPDCRNASNPYHEC E+CF++IAE KARNQQNEPV  SS  V+AGR S  SNF PPDEYED  DE+ ++                 
Subjt:  VREAIAEMSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDERLDK-----------------

Query:  ----------------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGW
                                          E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAESKYKKWEK PAP+GW
Subjt:  ----------------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGW

Query:  DVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIE
        DVFNQKTL+DAYKKRTKNVNVDLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIE
Subjt:  DVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIE

Query:  RAFGRYTLEIKNNLERGTALPD
        RAFGRYTLEIKNNLERGTALPD
Subjt:  RAFGRYTLEIKNNLERGTALPD

XP_022943827.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]7.6e-11271.75Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIAE KARNQQNEPVP SS  V+AGR SGSSNFVPPDEYED +DE+                           
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------

Query:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                +  E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L+DAYKKRTKNVNVDLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022986094.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima]9.9e-11271.75Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIAE KARNQQNEPVP SS  V+AGR SGSSNFVPPDEYED +DE+                           
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------

Query:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                +  E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L+DAYKKRTKNVNVDLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_023513083.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]2.2e-11171.43Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIAE KA+NQQNEPVP SS  V+AGR SGSSNFVPPDEYED +DE+                           
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------

Query:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                +  E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L+DAYKKRTKNVNVDLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF21.2e-11071.11Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER----------LDK--------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIAE KAR+Q+NEPVP SS  V+AGR SGSS+FVPPDEYED  DE+          LDK              
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER----------LDK--------------

Query:  ---------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                   E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAE+KYKKWEK PAP+GWDVFNQKT
Subjt:  ---------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L++AYKKRTKNVN+DLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A1S3C6T5 Pre-mRNA-splicing factor SYF27.7e-11070.48Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER----------LDK--------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIA+ KAR+Q+NEPVP SS  V+AGR SGSS+FVPPDEYED  DE+          LDK              
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER----------LDK--------------

Query:  ---------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                   E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAE+KYKKWEK PAP+GWDVFNQKT
Subjt:  ---------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L++AYKKRTKNVN+DLEEYNKMK  DPEFYREASSLQY    KISEDKI+NMVKEL DRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A5A7TRR3 Pre-mRNA-splicing factor SYF27.7e-11070.48Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER----------LDK--------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIA+ KAR+Q+NEPVP SS  V+AGR SGSS+FVPPDEYED  DE+          LDK              
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER----------LDK--------------

Query:  ---------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                   E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAE+KYKKWEK PAP+GWDVFNQKT
Subjt:  ---------------------------EEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L++AYKKRTKNVN+DLEEYNKMK  DPEFYREASSLQY    KISEDKI+NMVKEL DRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1FXE9 Pre-mRNA-splicing factor SYF23.7e-11271.75Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIAE KARNQQNEPVP SS  V+AGR SGSSNFVPPDEYED +DE+                           
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------

Query:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                +  E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L+DAYKKRTKNVNVDLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF24.8e-11271.75Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------
        MSDEGRVHPDCRNASNPYHEC E+CFKVIAE KARNQQNEPVP SS  V+AGR SGSSNFVPPDEYED +DE+                           
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDER---------------------------

Query:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT
                                +  E+KKMEP SESRG+SKQKWLEDRKKKIGKLLDAN          DTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  ------------------------LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        L+DAYKKRTKNVNVDLEEYNKMK  DPEFYREASSLQY    KISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
O95926 Pre-mRNA-splicing factor SYF26.2e-1637.99Show/hide
Query:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMK-AFDPEFYREA
        L +EEKK E  +      K K LE         + A D    AE   +K ++K    G+  +    L   Y + TK +  D+E Y +++     EF+  +
Subjt:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMK-AFDPEFYREA

Query:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL
        +SL +     S ++ID MV +L  + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Subjt:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL

Q28G05 Pre-mRNA-splicing factor syf22.1e-1639.66Show/hide
Query:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPE-FYREA
        L +EEKK E    + GV  ++          KLL+   + E AE   +K ++K    G+  +    L   Y++ TK +  D+EEY   K    E FY  +
Subjt:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPE-FYREA

Query:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL
         SL +     S+  ID MV +L  + EKR+ +SRRR +++D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Subjt:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL

Q4QRB2 Pre-mRNA-splicing factor SYF28.1e-1637.43Show/hide
Query:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMK-AFDPEFYREA
        L +EEKK E  +      K K LE         + A D    AE   ++ +KK    G+  +    L   Y + TK +  D+E Y + +     +F+  +
Subjt:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMK-AFDPEFYREA

Query:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL
        +SL +     S ++ID MV +L  + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Subjt:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf23.6e-1639.11Show/hide
Query:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPE-FYREA
        L  EEKK E  +      + K LE         + A D    AE   +K ++K    G+  +    L   Y++ TK +  D+EEY   K    E FY  +
Subjt:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPE-FYREA

Query:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL
         SL +     S+  ID MV +L  + EKR+ +SRRR +++D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Subjt:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF28.1e-1637.43Show/hide
Query:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMK-AFDPEFYREA
        L +EEKK E  +      K K LE         + A D    AE   ++ +KK    G+  +    L   Y + TK +  D+E Y + +     +F+  +
Subjt:  LDKEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMK-AFDPEFYREA

Query:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL
        +SL +     S ++ID MV +L  + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Subjt:  SSLQYVK--ISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein1.7e-8560.4Show/hide
Query:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKAR-NQQNEPVPISSGVVRA---GRGSGSSNFVPPDEYEDFQDERLD---------------------
        M  E RVHPDC NASNPYHEC E+CFK IAEAKAR  +QN  +       R     +     +    +E ED Q+ ++D                     
Subjt:  MSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKAR-NQQNEPVPISSGVVRA---GRGSGSSNFVPPDEYEDFQDERLD---------------------

Query:  ---------KEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLE
                  E+KKME  +E++G+SKQKWLE RKKKIGKLLDAN          DTQEAAESKYKKWEK+P P GWDVFNQKTL++AYKKRTKN+ VDLE
Subjt:  ---------KEEKKMEPQSESRGVSKQKWLEDRKKKIGKLLDAN----------DTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLE

Query:  EYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD
        EYN+M+A DPEFYREASSLQY    K S+DKID M KEL DR++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YTLEIKNNLERGTALPD
Subjt:  EYNKMKAFDPEFYREASSLQY---VKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

AT4G35110.1 Arabidopsis phospholipase-like protein (PEARLI 4) family9.5e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC   C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP

AT4G35110.2 Arabidopsis phospholipase-like protein (PEARLI 4) family9.5e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC   C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP

AT4G35110.3 Arabidopsis phospholipase-like protein (PEARLI 4) family9.5e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC   C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP

AT4G35110.4 Arabidopsis phospholipase-like protein (PEARLI 4) family9.5e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC   C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECCEFCFKVIAEAKA-RNQQNEPVPISSGVVRAGRGSGSSNFVPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTATAGAAGTGAGCTTGATTATGTGTTATGTTGCTGTCTGTGGATTCTTTTCCTCAGAATGTGTTATTGAAGTACGAGAAGCTATTGCAGAGATGTCTGATGA
AGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTACCATGAATGTTGCGAGTTCTGCTTTAAAGTAATAGCTGAAGCGAAAGCCCGGAATCAGCAAAATGAGC
CAGTTCCCATTTCATCAGGAGTTGTTCGAGCTGGTCGAGGTAGTGGTTCTTCCAATTTTGTGCCCCCTGATGAGTATGAAGATTTTCAAGATGAAAGGCTTGATAAAGAG
GAAAAAAAAATGGAACCTCAATCAGAATCAAGAGGCGTTTCTAAACAAAAGTGGCTTGAGGATCGAAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGATACACAAGA
GGCAGCCGAGTCCAAATATAAGAAATGGGAGAAGAAACCAGCTCCCCATGGATGGGATGTATTTAACCAGAAAACATTACACGATGCATACAAAAAACGGACGAAGAATG
TAAATGTTGACCTTGAGGAATATAATAAAATGAAAGCATTTGATCCCGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGTAAAGATTTCAGAGGATAAGATTGACAAT
ATGGTGAAAGAACTCAACGACCGGGACGAGAAGCGTAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATTGATTCCATCAATGATCGCAATGAGCATTT
CAACAAAAAGATTGAGCGGGCTTTTGGCAGATACACTCTGGAGATTAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTTATAGAAGTGAGCTTGATTATGTGTTATGTTGCTGTCTGTGGATTCTTTTCCTCAGAATGTGTTATTGAAGTACGAGAAGCTATTGCAGAGATGTCTGATGA
AGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTACCATGAATGTTGCGAGTTCTGCTTTAAAGTAATAGCTGAAGCGAAAGCCCGGAATCAGCAAAATGAGC
CAGTTCCCATTTCATCAGGAGTTGTTCGAGCTGGTCGAGGTAGTGGTTCTTCCAATTTTGTGCCCCCTGATGAGTATGAAGATTTTCAAGATGAAAGGCTTGATAAAGAG
GAAAAAAAAATGGAACCTCAATCAGAATCAAGAGGCGTTTCTAAACAAAAGTGGCTTGAGGATCGAAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGATACACAAGA
GGCAGCCGAGTCCAAATATAAGAAATGGGAGAAGAAACCAGCTCCCCATGGATGGGATGTATTTAACCAGAAAACATTACACGATGCATACAAAAAACGGACGAAGAATG
TAAATGTTGACCTTGAGGAATATAATAAAATGAAAGCATTTGATCCCGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGTAAAGATTTCAGAGGATAAGATTGACAAT
ATGGTGAAAGAACTCAACGACCGGGACGAGAAGCGTAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATTGATTCCATCAATGATCGCAATGAGCATTT
CAACAAAAAGATTGAGCGGGCTTTTGGCAGATACACTCTGGAGATTAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA
Protein sequenceShow/hide protein sequence
MNFIEVSLIMCYVAVCGFFSSECVIEVREAIAEMSDEGRVHPDCRNASNPYHECCEFCFKVIAEAKARNQQNEPVPISSGVVRAGRGSGSSNFVPPDEYEDFQDERLDKE
EKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANDTQEAAESKYKKWEKKPAPHGWDVFNQKTLHDAYKKRTKNVNVDLEEYNKMKAFDPEFYREASSLQYVKISEDKIDN
MVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD