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Sed0003939 (gene) of Chayote v1 genome

Gene IDSed0003939
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG13:14698087..14699635
RNA-Seq ExpressionSed0003939
SyntenySed0003939
Gene Ontology termsGO:0009635 - response to herbicide (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009769 - photosynthesis, light harvesting in photosystem II (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009517 - PSII associated light-harvesting complex II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.3e-14695.45Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLR T FLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVL+KWLKV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

XP_008452292.1 PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo]4.4e-14694.7Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS TLLR T FLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL+KWLKV+FKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

XP_022142746.1 chlorophyll a-b binding protein 13, chloroplastic [Momordica charantia]4.4e-14695.45Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLRPT FLGQ RGS QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+VEFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

XP_022929511.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata]3.3e-14695.45Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLR T FLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVL+KWLKV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

XP_022985252.1 chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima]7.5e-14695.08Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATAT+T LLR T FLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVL+KWLKV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

TrEMBL top hitse value%identityAlignment
A0A1S3BUM8 Chlorophyll a-b binding protein, chloroplastic2.1e-14694.7Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS TLLR T FLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL+KWLKV+FKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

A0A5A7TY25 Chlorophyll a-b binding protein, chloroplastic2.1e-14694.7Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MA+TATS TLLR T FLGQTRGS QN LRD VAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL+KWLKV+FKEPVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

A0A6J1CN44 Chlorophyll a-b binding protein, chloroplastic2.1e-14695.45Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLRPT FLGQ RGS QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+VEFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

A0A6J1ENC1 Chlorophyll a-b binding protein, chloroplastic1.6e-14695.45Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATATST LLR T FLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVL+KWLKV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

A0A6J1J4D4 Chlorophyll a-b binding protein, chloroplastic3.6e-14695.08Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATAT+T LLR T FLGQTR S QN LRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVL+KWLKV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKFAPGS
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

SwissProt top hitse value%identityAlignment
P14278 Chlorophyll a-b binding protein 4, chloroplastic1.2e-10170.68Show/hide
Query:  STTLLRPTLFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T  ++ + F+GQ  G SQN  +R V   G G+ TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Subjt:  STTLLRPTLFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC+ PE+L K   V+F E VWFKAGSQIFSEGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLG
Subjt:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG
        LADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI++PVANNAW YAT F PG
Subjt:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG

P27489 Chlorophyll a-b binding protein 13, chloroplastic4.9e-14089.39Show/hide
Query:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MAATA+STT+++ T FLGQT+ +  N LRDVVAMG+ ++TM NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCI PEVL+KW+KV+FKEPVWFKAGSQIFS+GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAWVYATKF PG+
Subjt:  DPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

P27494 Chlorophyll a-b binding protein 36, chloroplastic7.6e-10169.92Show/hide
Query:  STTLLRPTLFLGQTRGSSQNSL-RDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ +  + F GQT   SQN L R + +   G+ TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Subjt:  STTLLRPTLFLGQTRGSSQNSL-RDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC+ PE+L K   V+F E VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAV   QVVLMGL+EG+R+ G   +GEG D +YPGG  FDPLG
Subjt:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG
        LADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic2.3e-13485.82Show/hide
Query:  MAAT---ATSTTLLRPTLFL-GQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        MA+T   A S  ++  T FL GQ R +S + LRD+ A   G+ TMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEV
Subjt:  MAAT---ATSTTLLRPTLFL-GQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
        IHGRWAMLGA GC+ PEVLQKW+ VEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL
Subjt:  IHGRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL

Query:  GLADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        GLADDP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DH+D+PVANNAWV+ATKFAPGS
Subjt:  GLADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic3.0e-14289.81Show/hide
Query:  MAATAT-STTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MA+T T S+++L PT FLGQT+ SS N LRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MAATAT-STTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGAFGCITPEVLQKW++V+FKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DDP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAW +ATKFAPG+
Subjt:  DDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

Arabidopsis top hitse value%identityAlignment
AT2G05070.1 photosystem II light harvesting complex gene 2.24.3e-9967.67Show/hide
Query:  STTLLRPTLFLGQTR-GSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQT    S + ++ V  +G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STTLLRPTLFLGQTR-GSSQNSLRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC  PE+L K   V+F E VWFKAGSQIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG

AT2G05100.1 photosystem II light harvesting complex gene 2.11.1e-9968.16Show/hide
Query:  STTLLRPTLFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQT     N  LR V   G G+ TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STTLLRPTLFLGQTRGSSQNS-LRDVVAMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC  PE+L K   V+F E VWFKAGSQIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG+
Subjt:  LADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B17.5e-9671.13Show/hide
Query:  GTGKYTM---------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWLKVEFKE
        GTG+ TM             WYG DRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGA GC+ PE+L +   V+F E
Subjt:  GTGKYTM---------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWLKVEFKE

Query:  PVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPITFAELKVKEIKNGRLAMFSMF
         VWFKAGSQIFS+GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  FDPLGLA DP  FAELKVKE+KNGRLAMFSMF
Subjt:  PVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPITFAELKVKEIKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG
        GFFVQAIVTGKGPLENL DH+ +PV NNAW +AT F PG
Subjt:  GFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG

AT3G27690.1 photosystem II light harvesting complex gene 2.34.7e-9867.42Show/hide
Query:  STTLLRPTLFLGQTRGSSQNSLRDVV--AMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVI
        +T+ ++ + F GQT     N L   +  + G G+  M          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVI
Subjt:  STTLLRPTLFLGQTRGSSQNSLRDVV--AMGTGKYTM-------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVI

Query:  HGRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPL
        H RWAMLGA GC  PE+L K   V+F E VWFKAGSQIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL
Subjt:  HGRWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPL

Query:  GLADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG
         LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI +PVANNAW YAT F PG
Subjt:  GLADDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 32.2e-14389.81Show/hide
Query:  MAATAT-STTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
        MA+T T S+++L PT FLGQT+ SS N LRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHG
Subjt:  MAATAT-STTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG

Query:  RWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
        RWAMLGAFGCITPEVLQKW++V+FKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA
Subjt:  RWAMLGAFGCITPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLA

Query:  DDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS
        DDP+TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+DNPVANNAW +ATKFAPG+
Subjt:  DDPITFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACCGCCACCTCCACCACCCTTCTCCGGCCGACCCTGTTTCTCGGCCAAACCAGAGGCTCTTCCCAGAACTCCCTCCGAGATGTCGTCGCCATGGGAACCGG
CAAATACACCATGGGAAATGATCTGTGGTATGGGCCAGATCGAGTTAAGTACTTGGGGCCATTTTCAGCTCAGACTCCCTCCTACTTGAACGGCGAGTTCCCCGGTGATT
ATGGATGGGACACTGCTGGCTTATCCGCCGACCCCGAGGCCTTTGCCAAGAACAGAGCACTTGAGGTGATCCACGGGAGATGGGCCATGTTGGGAGCCTTCGGGTGCATA
ACACCAGAAGTCCTACAGAAATGGTTGAAAGTGGAATTCAAGGAGCCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCTCAGAAGGAGGGCTGGACTACCTGGGGAACCC
GAACCTGGTCCACGCCCAGAGCATCTTGGCCGTGTTGGGGTTCCAAGTGGTCCTAATGGGCCTGGTTGAAGGGTTCCGCATCAATGGGCTCGACGGCGTGGGCGAGGGCA
ACGACCTGTACCCGGGGGGTCAGTACTTCGACCCGCTTGGATTGGCCGACGACCCCATCACCTTTGCCGAGCTCAAGGTTAAGGAGATCAAGAACGGGCGGCTTGCCATG
TTCTCCATGTTCGGGTTCTTCGTGCAGGCTATCGTCACTGGAAAAGGTCCGCTTGAGAACCTCCTTGACCATATTGATAACCCTGTGGCCAACAATGCTTGGGTTTATGC
TACCAAGTTTGCCCCTGGCTCATAA
mRNA sequenceShow/hide mRNA sequence
TTAATAGTTTTGCCGAATCCAAAAAAAAAGAAAGAAAAGAAAATGGAGGAGAGAAATAGAAATCGATAAAGTGTGGATAGAAAGAGATGCATGAAAATCTTTTGAAGGAA
TGTGATTGGCTAACAAAACCCTCTCCTTAGCCCACAAAATTTGTCAATCTTGCATTCTTGACCACCCATTCTGTGATAATAGTCCCCCAATTTCTCCATTTTCTCACATC
TTTCTCACAACTCATAACACACAGCCAAGACTACCATAGAAATGGCCGCCACCGCCACCTCCACCACCCTTCTCCGGCCGACCCTGTTTCTCGGCCAAACCAGAGGCTCT
TCCCAGAACTCCCTCCGAGATGTCGTCGCCATGGGAACCGGCAAATACACCATGGGAAATGATCTGTGGTATGGGCCAGATCGAGTTAAGTACTTGGGGCCATTTTCAGC
TCAGACTCCCTCCTACTTGAACGGCGAGTTCCCCGGTGATTATGGATGGGACACTGCTGGCTTATCCGCCGACCCCGAGGCCTTTGCCAAGAACAGAGCACTTGAGGTGA
TCCACGGGAGATGGGCCATGTTGGGAGCCTTCGGGTGCATAACACCAGAAGTCCTACAGAAATGGTTGAAAGTGGAATTCAAGGAGCCTGTGTGGTTCAAGGCTGGATCC
CAGATCTTCTCAGAAGGAGGGCTGGACTACCTGGGGAACCCGAACCTGGTCCACGCCCAGAGCATCTTGGCCGTGTTGGGGTTCCAAGTGGTCCTAATGGGCCTGGTTGA
AGGGTTCCGCATCAATGGGCTCGACGGCGTGGGCGAGGGCAACGACCTGTACCCGGGGGGTCAGTACTTCGACCCGCTTGGATTGGCCGACGACCCCATCACCTTTGCCG
AGCTCAAGGTTAAGGAGATCAAGAACGGGCGGCTTGCCATGTTCTCCATGTTCGGGTTCTTCGTGCAGGCTATCGTCACTGGAAAAGGTCCGCTTGAGAACCTCCTTGAC
CATATTGATAACCCTGTGGCCAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAATTGGAAGTTGAACAAGTTTGTCATGTAAATTGTTCGGAGATCTC
TTTTTTTTGGATGTGGATTTGATAATTTAAACGGTTTAGTAACGGATCAATTAAGATTAGTTTCCACTTTACCAAATGAATGTTCTTAATTTAATTACATCATTTAATTT
AATCTAATCTATCATCAATCATA
Protein sequenceShow/hide protein sequence
MAATATSTTLLRPTLFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCI
TPEVLQKWLKVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPITFAELKVKEIKNGRLAM
FSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS