; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003958 (gene) of Chayote v1 genome

Gene IDSed0003958
OrganismSechium edule (Chayote v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationLG13:5903136..5907395
RNA-Seq ExpressionSed0003958
SyntenySed0003958
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600526.1 Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]7.0e-17088.38Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGTVCS WN+S +R  TGSADGT+V+FDS DPSSSS SL+RTSN KAHEAAIFKIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        L KHFKSNSSQI+D+QFGNS+S LKMI AFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RG+RQQSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPV+ELAL A+KGD VYA AWAQNIGRPYEVIAVAT KG+AIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

KAG7031165.1 Protein SEH1 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-16988.38Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGTVCS WN+S +R  TGSADGT+V+FDS DPSSSS SL+RTSN KAHE AIFKIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        L KHFKSNSSQI+D+QFGNS+S LKMI AFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RG+RQQSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPV+ELAL A+KGD VYA AWAQNIGRPYEVIAVAT KGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022942103.1 protein SEH1 [Cucurbita moschata]1.2e-16988.38Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGTVCS WN+S +R  TGSADGT+V+FDS DPSSSS SL+RTSN KAHEAAIFKIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        L KHFKSNSSQI+D+QFGNS+S LKMI AFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RG+RQQSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPV+ELAL A+KGD VYA AWAQNIGRPYEVIAVAT KGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_023547085.1 protein SEH1 [Cucurbita pepo subsp. pepo]9.2e-17088.69Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGTVCS WN+S +R  TGSADGT+V+FDS DPSSSS SL+RTSN K HEAAIFKIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        L KHFKSNSSQILD+QFGNS+S LKMI AFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RG+RQQSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPV+ELAL A+KGD VYA AWAQNIGRPYEVIAVAT KGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_038897768.1 protein SEH1 [Benincasa hispida]1.5e-17290.21Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATLGKGT+CS WN+S NR ATGSADGTL++FDSPDPSSSS SL+RTSN K HEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        LCKHFK NSSQILD+QFGNS+S LKMI AFSDGH+KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA C SASISWNPHRG+ QQ SFVLAFSS+TPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPV+ELAL A+KGDEVYA AWAQNIGRPYEVIAVAT KGIAIWRLGL+PDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHA FEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein9.6e-16586.85Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGT+CS WN+S  R AT S+DGTLV+FDSP PSSSS S + TSN KAHE AI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        LCK FKSNSSQILD+QFGNS+S LKMI AFSDG++KVYELMDPL+LKNWQLQAEFQNVIDSISTVRK+SC SASISWNPHRG+ QQSSFV+AFSS+TPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAH RWLPV+ELAL AEKGDEVYA AWAQNIGRPYEVIAVAT +GIAIW LGL+PD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH11.1e-16888.99Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGT+CS WN S +R AT S+DGTLV+FDSP PSSSS SL+RTSN KAHEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        LCK FKSNSSQILD+QFGNS+S LKMI AFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRK+SC SASISWNPHRG+ QQSSFVLAFSS+TPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPV+ELAL AEKGDEVYA AWAQNIGRPYEVIAVAT +GIAIWRLGL+PDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH15.4e-16888.07Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+  KGT+CS WN+S +R AT S DGTLV+FDSPDPSSSS SL+RTSN KAHEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        LCK FKSNS+Q+LD+QFGNS+S LKMI AFS  HVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRG+RQQSSFVLA +S+TPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPV+ELAL A+KGDEVYA AWAQNIGRPYEVIAVAT KGIAIW LG NPD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH15.8e-17088.38Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGTVCS WN+S +R  TGSADGT+V+FDS DPSSSS SL+RTSN KAHEAAIFKIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        L KHFKSNSSQI+D+QFGNS+S LKMI AFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RG+RQQSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPV+ELAL A+KGD VYA AWAQNIGRPYEVIAVAT KGIAIWRLGLNPD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1J2X1 protein SEH12.9e-16988.38Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGTVCS WN+S +R  TGSADGT+V+FDS DPSSSS SL+RTSN KAHEAAIFKIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        L KHFKSNSSQILD+QFGNS+S LKMI AFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RG+RQQSSFVLAF SDTPQL
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPV+ELAL A+KGD VYA AWAQNIGRPYEVIAVAT KGIAIWRLGLNPD+DGRLSTERVALLSGHN EVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
C1BK83 Nucleoporin SEH11.7e-3330.03Show/hide
Query:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKHFK-----SNSSQ
        ++F G R AT S+D ++ ++D  D    +   + T++ K H  +++++ W  PE+G  +A    D T+++WEE+V ++   Q  L    K      + + 
Subjt:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKHFK-----SNSSQ

Query:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQLNSAKV--WEFD
        + DV+F      L +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +   S D+    S KV  +E+ 
Subjt:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQLNSAKV--WEFD

Query:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRL-----GLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG
        +  +++  V  L       D V+  A+A N+GR + V+A+AT K + I++L       +     +L  +  A   GHN +VW + W++    LAS+G DG
Subjt:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRL-----GLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG

Query:  MVRLWQSNLNGVW
         VRLW++N    W
Subjt:  MVRLWQSNLNGVW

Q4FZW5 Nucleoporin SEH1-A2.1e-3128.34Show/hide
Query:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKHFKSNSSQ
        ++F G R AT S+D ++ ++D     S + +   T++ K H  +++++ W  PE+G  +A    D T+++WEE+V ++         W        + + 
Subjt:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKHFKSNSSQ

Query:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQ--LNSAKVWEFD
        + DV+F      L +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +   S D+    +   +++E++
Subjt:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQ--LNSAKVWEFD

Query:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++     L   +   D V+  A+A N+GR + ++AVAT K + I+    L     + G   +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q6GNF1 Nucleoporin SEH1-B1.6e-3128.34Show/hide
Query:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKHFKSNSSQ
        ++F G R AT S+D ++ ++D     S + +   T++ K H  +++++ W  PE+G  +A    D T+++WEE+V ++         W        + + 
Subjt:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKHFKSNSSQ

Query:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQ--LNSAKVWEFD
        + DV+F      L +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +   S D+    +   +++E++
Subjt:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQ--LNSAKVWEFD

Query:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++     L   +   D V+  A+A N+GR + ++AVAT K + I+    L     + G   +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWR---LGLNPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q93VR9 Protein SEH17.6e-12764.31Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M K+MATL  GT CS WN SG+R A GS +G L +++S   +SSS + S TS ++  E++I KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        LCK  K+ SSQ+LDVQFG S  SLKM+ A+SDG+++V+EL++PL+LKNWQLQAEFQNVIDS+ST+ K S LSAS+SWNP +G+ Q+ SFVLAF+SD+P L
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL V+ELAL  +KGD VYA +WA NIGRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP

Q96EE3 Nucleoporin SEH11.6e-3128.98Show/hide
Query:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKHFKSNSSQ
        ++F G R AT S+D ++ ++D     S S     T++ K H  +++++ W  PE+G  +A    D T+++WEE+V ++         W        + + 
Subjt:  WNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKHFKSNSSQ

Query:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQLNSAKV--WEFD
        + DV+F      L +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +   S D+     AKV  +E++
Subjt:  ILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQLNSAKV--WEFD

Query:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLG------LNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD
        +  +++     L       D V+  A+A N+GR + ++A+AT K + I+ L        +     +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLG------LNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein5.4e-12864.31Show/hide
Query:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M K+MATL  GT CS WN SG+R A GS +G L +++S   +SSS + S TS ++  E++I KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL
        LCK  K+ SSQ+LDVQFG S  SLKM+ A+SDG+++V+EL++PL+LKNWQLQAEFQNVIDS+ST+ K S LSAS+SWNP +G+ Q+ SFVLAF+SD+P L
Subjt:  LCKHFKSNSSQILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQL

Query:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL V+ELAL  +KGD VYA +WA NIGRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVSELALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCTATGGCGACGTTGGGCAAAGGGACGGTCTGTTCAGGTTGGAACTTCTCCGGCAACAGATTCGCCACCGGTTCGGCGGACGGAACCCTCGTCCTCTTCGA
TTCTCCGGACCCTTCTTCCTCGTCGCCGTCCTTATCTCGCACTTCAAACATCAAGGCACATGAGGCTGCAATTTTTAAGATTGTTTGGGTCCCTCCTGAGTATGGTGATT
CTGTTGCATGCATTTGTTCGGATGGAACTTCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACACTTCAAAAGTAATTCATCT
CAAATCCTAGATGTCCAATTTGGAAATTCTGCCTCCAGTCTGAAAATGATTATGGCATTTTCAGACGGTCATGTGAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAATTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTGTCTGCAAGTATATCTTGGAACCCACATCGAGGTGACA
GACAGCAATCAAGCTTTGTTTTGGCTTTTAGTTCGGACACGCCACAGCTTAATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCAGTTTCAGAG
TTGGCATTGGCGGCAGAAAAAGGAGATGAGGTTTATGCTGCTGCGTGGGCACAGAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCTGAAAGGGATTGCAAT
ATGGCGCCTTGGATTAAACCCGGACACTGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAAATGGAGTGGGACATGGGTG
GTATGACATTAGCATCGACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAGGGCTGAAGATTGTAGCAGGCGAAGGTGTGAAGAAGAAACTGAGAGTGTTGAGATGGAGAAGGCTATGGCGACGTTGGGCAAAGGGACGGTCTGTTCAGGTTGGAA
CTTCTCCGGCAACAGATTCGCCACCGGTTCGGCGGACGGAACCCTCGTCCTCTTCGATTCTCCGGACCCTTCTTCCTCGTCGCCGTCCTTATCTCGCACTTCAAACATCA
AGGCACATGAGGCTGCAATTTTTAAGATTGTTTGGGTCCCTCCTGAGTATGGTGATTCTGTTGCATGCATTTGTTCGGATGGAACTTCGTCATTGTGGGAGGAGGTTGTT
GAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACACTTCAAAAGTAATTCATCTCAAATCCTAGATGTCCAATTTGGAAATTCTGCCTCCAGTCTGAAAATGATTAT
GGCATTTTCAGACGGTCATGTGAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAATTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAG
TCAGGAAAGCATCTTGCTTGTCTGCAAGTATATCTTGGAACCCACATCGAGGTGACAGACAGCAATCAAGCTTTGTTTTGGCTTTTAGTTCGGACACGCCACAGCTTAAT
TCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCAGTTTCAGAGTTGGCATTGGCGGCAGAAAAAGGAGATGAGGTTTATGCTGCTGCGTGGGCACA
GAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCTGAAAGGGATTGCAATATGGCGCCTTGGATTAAACCCGGACACTGATGGAAGGCTCTCAACAGAAAGAG
TTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAAATGGAGTGGGACATGGGTGGTATGACATTAGCATCGACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCC
AACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAACCTTGAAAACTTTTTTCTTCTCTATATGATGTAACCACTTCCTGTATTTATAGGGAAGA
TTTTTTTGAATTATATTGTTTGTCTTGCTTAGTGGGGTGCTAAGATTAGAAACATGTTATTCGACATCATTCGAAAAGATCAAATGCCATTGAAGCTTTTATTTCTCCTA
ATTACTCTTGCTTAGTTCAGACTTCTGGTGCTCAAGAACTATAGAGTGATTACACACTCTCACAAGAAGATAGAATAACTTGAATTAGAGAGATCGAGAATTGAGTTTTA
ACATGAGATGCTGATAAATCGGAAGGAAAATAATCACGGAGTATTGCGTTTAAAACTGAGGATATTATAGTGTTTCTTTCCATTTACGTTGAAAAGAACAGTTCTTATAA
ACAGCTTTAAAATAAATATTAGAAATTTAACTTTAGAGGTTTAACAATAGCTGATAGCCTAAAG
Protein sequenceShow/hide protein sequence
MEKAMATLGKGTVCSGWNFSGNRFATGSADGTLVLFDSPDPSSSSPSLSRTSNIKAHEAAIFKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKHFKSNSS
QILDVQFGNSASSLKMIMAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGDRQQSSFVLAFSSDTPQLNSAKVWEFDQAHQRWLPVSE
LALAAEKGDEVYAAAWAQNIGRPYEVIAVATLKGIAIWRLGLNPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS