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Sed0003976 (gene) of Chayote v1 genome

Gene IDSed0003976
OrganismSechium edule (Chayote v1)
DescriptionDUF4219 domain-containing protein
Genome locationLG06:10212585..10213978
RNA-Seq ExpressionSed0003976
SyntenySed0003976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]6.2e-1836.7Show/hide
Query:  EVEKEKCDKAYLCLMANSTNAFDEESDEH--EVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK---------------------------------
        E E E  + A L LM  S     ++ DEH  EVT EP S +ELF+ FE++Q+DLEKL SKY   ++K                                 
Subjt:  EVEKEKCDKAYLCLMANSTNAFDEESDEH--EVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK---------------------------------

Query:  -------SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLSSSSKNIFVKGTPCM
               ++K +L+DKV+FLE DS EK++L+ + KE E+   ++L  AKE+I+KLTI AQ+LDK I++ K+  +K+ LGY +E+ + SSK  FVK +P +
Subjt:  -------SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLSSSSKNIFVKGTPCM

Query:  SK-SVLSNVSNLISSSFV
         K ++   + NL+   +V
Subjt:  SK-SVLSNVSNLISSSFV

WP_139161320.1 DUF4219 domain-containing protein, partial [Acinetobacter baumannii]1.5e-0837.23Show/hide
Query:  SNDRPPFFDGLNYNVWRNRIKTFMLGMDFNIL-YVCEHDL-----SKLELNIVLLTFNAKSLNIIYCALDRKIFHIISHFEYAYDVWIVLENMY
        S  RPPFFDG +Y+ W+ R++ F+  +D+ I   VC+        +  EL+   ++ N+K++N ++CALD+K FH +S+   AY++W  LE +Y
Subjt:  SNDRPPFFDGLNYNVWRNRIKTFMLGMDFNIL-YVCEHDL-----SKLELNIVLLTFNAKSLNIIYCALDRKIFHIISHFEYAYDVWIVLENMY

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]2.1e-1843.53Show/hide
Query:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK-----SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEM
        E E  + A  C MA+S     E+  + EV  +PLSYDELF+ FE+MQ++LEKL SKY   + K     S+  SL D +  L+ + H+ ++L+ + K+ E 
Subjt:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK-----SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEM

Query:  LATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLS-SSSKNIFVKGTPCMSKSVLSNV
         A  EL  AK+ I++LTI AQ+LDK I+  K   +K+ LGY NE  + SSSK IFVK +P M K V   V
Subjt:  LATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLS-SSSKNIFVKGTPCMSKSVLSNV

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]1.6e-1038.01Show/hide
Query:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRKSDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKE
        E E  + A  C MA+S     E+  + E+T +PLSYDELF+ FE+MQ+DLEKLV                                             E
Subjt:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRKSDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKE

Query:  LKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNE-NLSSSSKNIFVKGTPCMSKSVLSNVSNLISS
        L  AK+SI+KLTI AQ+LDK I++ K   +K+ LGY +E +  SSSK IFVK +P M K V   V  L +S
Subjt:  LKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNE-NLSSSSKNIFVKGTPCMSKSVLSNVSNLISS

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.1e-2243.52Show/hide
Query:  EVEKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK---------------------------------SD
        E E E  + A L LMA+S    D+E D+ +VT EPLS DELF+ FESMQ+DLEKL SKY   ++K                                 SD
Subjt:  EVEKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK---------------------------------SD

Query:  KF------SLIDKVKFLECDSHEKNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLS-SSSKNIFVKGTPCMSK
        K       +L+DKV+FLE DS EK++L+ + KE E+   +EL  AKE+I+KLTI AQ+LDK I++ K+  +K+ LGY +E+ + SSSK  FVK +P + K
Subjt:  KF------SLIDKVKFLECDSHEKNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLS-SSSKNIFVKGTPCMSK

Query:  SVLSN-VSNLISSSFV
          +SN VSN + SSFV
Subjt:  SVLSN-VSNLISSSFV

TrEMBL top hitse value%identityAlignment
A0A1Q3CQ89 DUF4219 domain-containing protein2.0e-0627.49Show/hide
Query:  VSDSNDRPPFFDGLNYNVWRNRIKTFMLGMDFNI-------LYVCEHDLSKLELNI---VLLTFNAKSLNIIYCALDRKIFHIISHFEYAYDVWIVLENM
        VS   + PPFF+G NYN W+ ++ +F+  +D+N+       L + +  +SK E+      +L  NAK+ +I++CAL   +F+ IS      ++W  LE++
Subjt:  VSDSNDRPPFFDGLNYNVWRNRIKTFMLGMDFNI-------LYVCEHDLSKLELNI---VLLTFNAKSLNIIYCALDRKIFHIISHFEYAYDVWIVLENM

Query:  YSVENSPCISNDLFDAKENYNSQNQEIIHEVEKEKCDKAYLCLMANSTNAFDEESDEHEVTRE--PLSYDE
        +  +N                               ++  LCLMA   +    ESDE + ++E   +SYDE
Subjt:  YSVENSPCISNDLFDAKENYNSQNQEIIHEVEKEKCDKAYLCLMANSTNAFDEESDEHEVTRE--PLSYDE

A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein3.0e-1836.7Show/hide
Query:  EVEKEKCDKAYLCLMANSTNAFDEESDEH--EVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK---------------------------------
        E E E  + A L LM  S     ++ DEH  EVT EP S +ELF+ FE++Q+DLEKL SKY   ++K                                 
Subjt:  EVEKEKCDKAYLCLMANSTNAFDEESDEH--EVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK---------------------------------

Query:  -------SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLSSSSKNIFVKGTPCM
               ++K +L+DKV+FLE DS EK++L+ + KE E+   ++L  AKE+I+KLTI AQ+LDK I++ K+  +K+ LGY +E+ + SSK  FVK +P +
Subjt:  -------SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLSSSSKNIFVKGTPCM

Query:  SK-SVLSNVSNLISSSFV
         K ++   + NL+   +V
Subjt:  SK-SVLSNVSNLISSSFV

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein2.8e-0832.63Show/hide
Query:  FDAKENYNSQNQEIIHEVEKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRKSDKFSLIDKVKFLECDSHE
        F  ++ Y  ++     E + EK  K    + A   ++   ES+  ++    L    +    +  +HD E + SK+      ++K +L+DKV+FLE D  E
Subjt:  FDAKENYNSQNQEIIHEVEKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRKSDKFSLIDKVKFLECDSHE

Query:  KNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNE-NLSSSSKNIFVKGTPCMSKSVLSN-VSNLISS
        K++L+ + KE E+   ++L  AKE+I+KLTI AQ+L + I++ K+  +K+ LGY +E +  SSSK  FVK +P +    + N VSN + S
Subjt:  KNDLLHMFKEKEMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNE-NLSSSSKNIFVKGTPCMSKSVLSN-VSNLISS

A0A6J1DS74 uncharacterized protein LOC1110238061.0e-1843.53Show/hide
Query:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK-----SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEM
        E E  + A  C MA+S     E+  + EV  +PLSYDELF+ FE+MQ++LEKL SKY   + K     S+  SL D +  L+ + H+ ++L+ + K+ E 
Subjt:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRK-----SDKFSLIDKVKFLECDSHEKNDLLHMFKEKEM

Query:  LATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLS-SSSKNIFVKGTPCMSKSVLSNV
         A  EL  AK+ I++LTI AQ+LDK I+  K   +K+ LGY NE  + SSSK IFVK +P M K V   V
Subjt:  LATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLS-SSSKNIFVKGTPCMSKSVLSNV

A0A6J1DY46 uncharacterized protein LOC1110252597.9e-1138.01Show/hide
Query:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRKSDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKE
        E E  + A  C MA+S     E+  + E+T +PLSYDELF+ FE+MQ+DLEKLV                                             E
Subjt:  EKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRKSDKFSLIDKVKFLECDSHEKNDLLHMFKEKEMLATKE

Query:  LKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNE-NLSSSSKNIFVKGTPCMSKSVLSNVSNLISS
        L  AK+SI+KLTI AQ+LDK I++ K   +K+ LGY +E +  SSSK IFVK +P M K V   V  L +S
Subjt:  LKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNE-NLSSSSKNIFVKGTPCMSKSVLSNVSNLISS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGCTTTAAATTTTGTAAGTGATTCTAATGATAGACCTCCTTTCTTTGATGGTTTAAATTATAATGTTTGGAGAAATAGAATAAAGACTTTTATGCTTGGTATGGA
TTTTAATATTCTATATGTTTGTGAGCATGATTTGTCCAAATTGGAATTGAATATTGTGTTGCTCACTTTTAATGCTAAATCTTTAAATATTATATATTGTGCATTAGATA
GAAAAATATTTCATATAATTTCACATTTTGAATATGCATATGATGTTTGGATTGTTCTTGAAAACATGTATAGTGTAGAAAATTCTCCTTGTATTTCTAATGATTTATTT
GATGCGAAGGAGAATTATAATTCTCAAAATCAAGAAATTATTCATGAAGTTGAAAAAGAGAAATGTGATAAAGCTTATTTATGTTTGATGGCTAATTCAACTAACGCTTT
TGATGAGGAAAGCGATGAACATGAGGTAACTCGAGAACCTCTTTCTTACGATGAGTTATTTGATAGATTTGAAAGCATGCAACATGATTTAGAAAAACTTGTATCTAAAT
ATGCAAACTATCAAAGAAAAAGTGATAAATTTTCTTTGATTGACAAAGTTAAATTTCTTGAATGCGATAGTCATGAGAAAAATGATCTTTTGCATATGTTTAAAGAAAAG
GAAATGCTTGCTACTAAAGAACTTAAAATTGCAAAAGAATCCATTAGAAAATTGACTATTGTTGCTCAACAATTAGATAAAACTATTGACATGGATAAAGCTTTAAATGA
GAAAAAGATTTTAGGTTATGGGAATGAAAATCTTTCATCTAGCTCTAAGAATATTTTTGTTAAGGGTACTCCTTGTATGTCTAAAAGTGTTTTATCCAATGTGTCTAATT
TGATTAGTTCTAGTTTTGTGTCAAAATACGAGAAAGTTAGAAAAATCAATGAGAATTCAACTTTTGTGCCTAAACAATATCATGTTGGATCTAAATGTGTTCATAATGAA
CAATGTAATCATAAGCTTGAAAAAGATAGAGAGTCGCATGAAAAATCAAAATGCATACTTAATTTTAGAAATACTAGACATGCGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGCTTTAAATTTTGTAAGTGATTCTAATGATAGACCTCCTTTCTTTGATGGTTTAAATTATAATGTTTGGAGAAATAGAATAAAGACTTTTATGCTTGGTATGGA
TTTTAATATTCTATATGTTTGTGAGCATGATTTGTCCAAATTGGAATTGAATATTGTGTTGCTCACTTTTAATGCTAAATCTTTAAATATTATATATTGTGCATTAGATA
GAAAAATATTTCATATAATTTCACATTTTGAATATGCATATGATGTTTGGATTGTTCTTGAAAACATGTATAGTGTAGAAAATTCTCCTTGTATTTCTAATGATTTATTT
GATGCGAAGGAGAATTATAATTCTCAAAATCAAGAAATTATTCATGAAGTTGAAAAAGAGAAATGTGATAAAGCTTATTTATGTTTGATGGCTAATTCAACTAACGCTTT
TGATGAGGAAAGCGATGAACATGAGGTAACTCGAGAACCTCTTTCTTACGATGAGTTATTTGATAGATTTGAAAGCATGCAACATGATTTAGAAAAACTTGTATCTAAAT
ATGCAAACTATCAAAGAAAAAGTGATAAATTTTCTTTGATTGACAAAGTTAAATTTCTTGAATGCGATAGTCATGAGAAAAATGATCTTTTGCATATGTTTAAAGAAAAG
GAAATGCTTGCTACTAAAGAACTTAAAATTGCAAAAGAATCCATTAGAAAATTGACTATTGTTGCTCAACAATTAGATAAAACTATTGACATGGATAAAGCTTTAAATGA
GAAAAAGATTTTAGGTTATGGGAATGAAAATCTTTCATCTAGCTCTAAGAATATTTTTGTTAAGGGTACTCCTTGTATGTCTAAAAGTGTTTTATCCAATGTGTCTAATT
TGATTAGTTCTAGTTTTGTGTCAAAATACGAGAAAGTTAGAAAAATCAATGAGAATTCAACTTTTGTGCCTAAACAATATCATGTTGGATCTAAATGTGTTCATAATGAA
CAATGTAATCATAAGCTTGAAAAAGATAGAGAGTCGCATGAAAAATCAAAATGCATACTTAATTTTAGAAATACTAGACATGCGCATTGA
Protein sequenceShow/hide protein sequence
MTALNFVSDSNDRPPFFDGLNYNVWRNRIKTFMLGMDFNILYVCEHDLSKLELNIVLLTFNAKSLNIIYCALDRKIFHIISHFEYAYDVWIVLENMYSVENSPCISNDLF
DAKENYNSQNQEIIHEVEKEKCDKAYLCLMANSTNAFDEESDEHEVTREPLSYDELFDRFESMQHDLEKLVSKYANYQRKSDKFSLIDKVKFLECDSHEKNDLLHMFKEK
EMLATKELKIAKESIRKLTIVAQQLDKTIDMDKALNEKKILGYGNENLSSSSKNIFVKGTPCMSKSVLSNVSNLISSSFVSKYEKVRKINENSTFVPKQYHVGSKCVHNE
QCNHKLEKDRESHEKSKCILNFRNTRHAH