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Sed0003983 (gene) of Chayote v1 genome

Gene IDSed0003983
OrganismSechium edule (Chayote v1)
DescriptionF-box domain-containing protein
Genome locationLG02:50631325..50635024
RNA-Seq ExpressionSed0003983
SyntenySed0003983
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597321.1 hypothetical protein SDJN03_10501, partial [Cucurbita argyrosperma subsp. sororia]9.4e-11180.65Show/hide
Query:  ESMAQADLIGGGGR-RRRKTKKEK------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIP
        E MA + L+GGG R + RK  +E       +QNGT S +LLQDP +VLG DLL+AILGYVD+RSVALSLLVSRSWY +ASSD LWSSKCVELWLGKAHIP
Subjt:  ESMAQADLIGGGGR-RRRKTKKEK------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIP

Query:  RLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDER
        RLAQ RGLPK AAYSLSVMDG RTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS  LMRRYFHPDGSQTADPDD+VWGGHECCFSTVTT VGD  +
Subjt:  RLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDER

Query:  IREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        IREHYVRIN+WPR+ VSRNEDWSW+MSNHFTSYSSIADAEK GGTGPL
Subjt:  IREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

KAG7028788.1 hypothetical protein SDJN02_09969 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-11080.89Show/hide
Query:  MAQADLIGGGGR-RRRKTKKEK------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIPRL
        MA + L+GGG R + RK  +E       +QNGT S +LLQDP +VLG DLL+AILGYVD+RSVALSLLVSRSWY +ASSD LWSSKCVELWLGKAHIPRL
Subjt:  MAQADLIGGGGR-RRRKTKKEK------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIPRL

Query:  AQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDERIR
        AQ RGLPK AAYSLSVMDG RTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS  LMRRYFHPDGSQTADPDD+VWGGHECCFSTVTT VGD  +IR
Subjt:  AQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDERIR

Query:  EHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        EHYVRIN+WPR+ VSRNEDWSW+MSNHFTSYSSIADAEK GGTGPL
Subjt:  EHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

XP_004134023.1 uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus]1.1e-11180.24Show/hide
Query:  MAQADLIGGGGRRRRKTKKEK---------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIP
        MAQ+D +GGG R + + KK+K         +QN      LLQDP +VLG DLLLAIL Y+DARSVALSL VSRSWYAVASSD LWSSKC+ELWLGKAHIP
Subjt:  MAQADLIGGGGRRRRKTKKEK---------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIP

Query:  RLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDER
        RLAQ RGLPK AAYSLSVMDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDG+QTADPDD+VWGGHE CFSTVT+FVGD E 
Subjt:  RLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDER

Query:  IREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        IREHYVRINRWPR+FVSRNEDWSW+MSNHFTSYSSIAD EK GGTGPL
Subjt:  IREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

XP_022157958.1 uncharacterized protein LOC111024557 isoform X1 [Momordica charantia]4.2e-11179.12Show/hide
Query:  ESMAQADLIGGGGRRRRKTKKEKE--------QNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHI
        E M Q D +GGG   + + KK+ E        +NG+++ +LLQDPLQVLG DLL+AILGYVDARSVALSLLVSRSWYAVASSD LWSSKCVELWLGKAHI
Subjt:  ESMAQADLIGGGGRRRRKTKKEKE--------QNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHI

Query:  PRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDE
        PRLA I+GLP  AAYSLSVMDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDD+VWGGHECCFS VT+F GDD 
Subjt:  PRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDE

Query:  RIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        +IREHYVRINRWPR+ VSRNEDWSWK+SN   SYSSIADA+K GGTGPL
Subjt:  RIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

XP_038875840.1 uncharacterized protein LOC120068200 [Benincasa hispida]2.7e-11382.11Show/hide
Query:  MAQADLIGGGGR-RRRKTKKE------KEQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIPRL
        MAQ+DL+GGG R + RK K+E      ++QNGT++ +LLQDP +VLG DL +AIL Y+DARSVALSLLVSRSWYA+ASSD LWSSKC ELWLGKAHIPRL
Subjt:  MAQADLIGGGGR-RRRKTKKE------KEQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIPRL

Query:  AQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDERIR
        AQ RGLPK AAYSLSVMDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDD+VWGGHE CF TVT+FVGD E IR
Subjt:  AQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDERIR

Query:  EHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        EHYVRIN+WPR+FVSRNEDWSWKMSNHFTSYSSIADAEK GGTGPL
Subjt:  EHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

TrEMBL top hitse value%identityAlignment
A0A0A0L471 F-box domain-containing protein5.4e-11280.24Show/hide
Query:  MAQADLIGGGGRRRRKTKKEK---------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIP
        MAQ+D +GGG R + + KK+K         +QN      LLQDP +VLG DLLLAIL Y+DARSVALSL VSRSWYAVASSD LWSSKC+ELWLGKAHIP
Subjt:  MAQADLIGGGGRRRRKTKKEK---------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIP

Query:  RLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDER
        RLAQ RGLPK AAYSLSVMDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDG+QTADPDD+VWGGHE CFSTVT+FVGD E 
Subjt:  RLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDER

Query:  IREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        IREHYVRINRWPR+FVSRNEDWSW+MSNHFTSYSSIAD EK GGTGPL
Subjt:  IREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

A0A1S3AWZ4 uncharacterized protein LOC103483521 isoform X13.0e-11077.25Show/hide
Query:  MAQADLIGGGGR---RRRKTKKEK-------------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELW
        MAQ+D + GG R   R++K KK+K             +QN      +LQDP +VLG DLL+ IL Y+DARSVALSLLVSRSWYAVASSD LWSSKC+ELW
Subjt:  MAQADLIGGGGR---RRRKTKKEK-------------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELW

Query:  LGKAHIPRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTT
        LGKAHIPRLAQ RGLPK AAYSLS+MDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDD+VWGGHE CFSTVT+
Subjt:  LGKAHIPRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTT

Query:  FVGDDERIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        FVGD E IREHYVRINRWPR+FVSRNEDWSW+MSNHFTSYSSIAD +K GGTGPL
Subjt:  FVGDDERIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

A0A5A7U1A5 F-box family protein1.6e-10876.38Show/hide
Query:  MAQADLIGGGGR---RRRKTKKEK------------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWL
        MAQ+D +  G R   R++K KK+K            +QN      +LQDP +VLG DLL+ IL Y+DARSVALSLLVSRSWYAVASSD LWSSKC+ELW 
Subjt:  MAQADLIGGGGR---RRRKTKKEK------------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWL

Query:  GKAHIPRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTF
        GKAHIPRLAQ RGLPK AAYSLS+MDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDD+VWGGHE CFSTVT+F
Subjt:  GKAHIPRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTF

Query:  VGDDERIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        VGD E IREHYVRINRWPR+FVSRNEDWSW+MSNHFTSY SIAD +K GGTGPL
Subjt:  VGDDERIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

A0A5D3D180 F-box family protein1.2e-10876.68Show/hide
Query:  MAQADLIGGGGR---RRRKTKKEK-----------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLG
        MAQ+D +  G R   R++K KK+K           +QN      +LQDP +VLG DLL+ IL Y+DARSVALSLLVSRSWYAVASSD LWSSKC+ELW G
Subjt:  MAQADLIGGGGR---RRRKTKKEK-----------EQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLG

Query:  KAHIPRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFV
        KAHIPRLAQ RGLPK AAYSLS+MDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDD+VWGGHE CFSTVT+FV
Subjt:  KAHIPRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFV

Query:  GDDERIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        GD E IREHYVRINRWPR+FVSRNEDWSW+MSNHFTSY SIAD +K GGTGPL
Subjt:  GDDERIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

A0A6J1DUS5 uncharacterized protein LOC111024557 isoform X12.1e-11179.12Show/hide
Query:  ESMAQADLIGGGGRRRRKTKKEKE--------QNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHI
        E M Q D +GGG   + + KK+ E        +NG+++ +LLQDPLQVLG DLL+AILGYVDARSVALSLLVSRSWYAVASSD LWSSKCVELWLGKAHI
Subjt:  ESMAQADLIGGGGRRRRKTKKEKE--------QNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHI

Query:  PRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDE
        PRLA I+GLP  AAYSLSVMDGKRTRIMREDLCDHAW FHFNKEAP YWRDLDPYWQGS PLMRRYFHPDGSQTADPDD+VWGGHECCFS VT+F GDD 
Subjt:  PRLAQIRGLPKFAAYSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDE

Query:  RIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL
        +IREHYVRINRWPR+ VSRNEDWSWK+SN   SYSSIADA+K GGTGPL
Subjt:  RIREHYVRINRWPRLFVSRNEDWSWKMSNHFTSYSSIADAEKVGGTGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCAACTGAATCCATGGCGCAGGCCGACCTAATCGGAGGTGGAGGGCGGCGGCGGCGGAAAACCAAGAAGGAGAAGGAGCAAAACGGAACCAAATCTCTTCTTCT
CCTTCAAGATCCCTTACAGGTTTTAGGTCACGATCTGTTATTGGCGATACTGGGCTACGTTGACGCACGCAGCGTGGCACTTTCTCTTCTCGTCTCTCGGTCCTGGTACG
CCGTTGCTTCCAGCGATTGCTTGTGGAGTTCCAAGTGTGTCGAACTGTGGCTTGGAAAAGCTCATATCCCTAGGTTGGCGCAAATCCGAGGTCTTCCAAAGTTTGCTGCC
TATTCATTATCCGTCATGGATGGAAAACGAACTCGCATTATGAGGGAGGATTTATGTGACCATGCTTGGCTATTTCACTTCAATAAGGAAGCTCCTGCGTACTGGCGAGA
TCTCGATCCGTACTGGCAAGGTAGCAGCCCTCTCATGCGTCGTTATTTCCATCCCGATGGGAGTCAAACTGCAGATCCTGATGACAAAGTATGGGGTGGTCATGAATGCT
GCTTTTCCACTGTAACCACTTTTGTTGGTGATGATGAGAGGATTAGAGAACACTATGTTAGGATTAATAGATGGCCAAGACTGTTTGTGTCAAGGAATGAAGATTGGAGC
TGGAAGATGTCGAATCACTTCACCTCGTACTCAAGTATAGCCGATGCCGAGAAGGTTGGAGGGACGGGGCCACTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAGAATCGGAAGATATTTGAAGCAATTTTAAGAAGATAAGTTCAGGAAAATTAATTTTACCGCCTCTCTCTCAGCAATGTCGGCTGGATGAAATTACAGAATGATCGCA
ACTGAATCCATGGCGCAGGCCGACCTAATCGGAGGTGGAGGGCGGCGGCGGCGGAAAACCAAGAAGGAGAAGGAGCAAAACGGAACCAAATCTCTTCTTCTCCTTCAAGA
TCCCTTACAGGTTTTAGGTCACGATCTGTTATTGGCGATACTGGGCTACGTTGACGCACGCAGCGTGGCACTTTCTCTTCTCGTCTCTCGGTCCTGGTACGCCGTTGCTT
CCAGCGATTGCTTGTGGAGTTCCAAGTGTGTCGAACTGTGGCTTGGAAAAGCTCATATCCCTAGGTTGGCGCAAATCCGAGGTCTTCCAAAGTTTGCTGCCTATTCATTA
TCCGTCATGGATGGAAAACGAACTCGCATTATGAGGGAGGATTTATGTGACCATGCTTGGCTATTTCACTTCAATAAGGAAGCTCCTGCGTACTGGCGAGATCTCGATCC
GTACTGGCAAGGTAGCAGCCCTCTCATGCGTCGTTATTTCCATCCCGATGGGAGTCAAACTGCAGATCCTGATGACAAAGTATGGGGTGGTCATGAATGCTGCTTTTCCA
CTGTAACCACTTTTGTTGGTGATGATGAGAGGATTAGAGAACACTATGTTAGGATTAATAGATGGCCAAGACTGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATG
TCGAATCACTTCACCTCGTACTCAAGTATAGCCGATGCCGAGAAGGTTGGAGGGACGGGGCCACTTTAATGTCGATTGCGCAATTCCATCAAATCATCCCTGCTAGATTG
ATGAAGGGCATAAACGGCTAGTGTTGAATGCTTGTTCTCTCTTTCTTGTAGAGGCTGCTGTTTTGGTGTGTACAGAATTTTGAAATTGGTATTTGGTTATGGATCTTTTG
AATAATAATAAGTAGATTAAGATTTCAAAAAATAATAATAATAATAATAATAAGTAGATTATGTATGTTTGTAGATGTTGAATGATAGTAACTAGTAAGATTTGAAATTA
TCATGTTTTCGTGTTTGGTGAGTGAGTTTGTTTTTCTTAGG
Protein sequenceShow/hide protein sequence
MIATESMAQADLIGGGGRRRRKTKKEKEQNGTKSLLLLQDPLQVLGHDLLLAILGYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWLGKAHIPRLAQIRGLPKFAA
YSLSVMDGKRTRIMREDLCDHAWLFHFNKEAPAYWRDLDPYWQGSSPLMRRYFHPDGSQTADPDDKVWGGHECCFSTVTTFVGDDERIREHYVRINRWPRLFVSRNEDWS
WKMSNHFTSYSSIADAEKVGGTGPL