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Sed0003989 (gene) of Chayote v1 genome

Gene IDSed0003989
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:40483739..40493673
RNA-Seq ExpressionSed0003989
SyntenySed0003989
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443054.1 PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo]1.6e-1560.2Show/hide
Query:  VKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
        VKR+R+R  N++CD SP+     ERKWLI   GR     KKV        ++ IRD+ RNKS +L +IQKTWRRTV+GASKVLLEKHYNTHRRLISDI
Subjt:  VKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
XP_022935142.1 uncharacterized protein LOC111442101 [Cucurbita moschata]4.2e-1658.42Show/hide
Query:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD
        +V ++RRRR N++C ESP+     ERKWLIP  GR     KK+          ++ IRD+ RNKS  L +IQKTWRRTV+GASKVLLEKHYNTHRRLISD
Subjt:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD

Query:  I
        I
Subjt:  I
XP_022983155.1 uncharacterized protein LOC111481793 [Cucurbita maxima]4.2e-1658.42Show/hide
Query:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD
        +V ++RRRR N++C ESP+     ERKWLIP  GR     KK+          ++ IRD+ RNKS  L +IQKTWRRTV+GASKVLLEKHYNTHRRLISD
Subjt:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD

Query:  I
        I
Subjt:  I
XP_023526943.1 uncharacterized protein LOC111790316 [Cucurbita pepo subsp. pepo]1.2e-1557.43Show/hide
Query:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD
        +V ++RRRR N++C ESP+     ERKWLIP  GR     KK+          ++ IRD+ RNKS  L +IQKTWRRTV+GASKV LEKHYNTHRRLISD
Subjt:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD

Query:  I
        I
Subjt:  I
XP_038905728.1 uncharacterized protein LOC120091691 [Benincasa hispida]7.1e-1659Show/hide
Query:  SVKRQRRRRVNDQCDESPA------ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
        +V ++RR+RVN++C ESP+      ERKWLI   GR     KKV        ++ IRD+ RNKS +L +IQKTWRRTV+GASKVLLEKHYNTHRRLISDI
Subjt:  SVKRQRRRRVNDQCDESPA------ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
TrEMBL top hitse value%identityAlignment
A0A0A0LGY2 Uncharacterized protein6.5e-1557.58Show/hide
Query:  VKRQRRRRVNDQCDESPA------ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
        VKR+R+R  N++  +SP+      ERKWLI   GR     KKV        ++ IRD+ RNKS +L +IQKTWRRTV+GASKVLLEKHYNTHRRLISDI
Subjt:  VKRQRRRRVNDQCDESPA------ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
A0A1S3B7W3 uncharacterized protein LOC1034867647.7e-1660.2Show/hide
Query:  VKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
        VKR+R+R  N++CD SP+     ERKWLI   GR     KKV        ++ IRD+ RNKS +L +IQKTWRRTV+GASKVLLEKHYNTHRRLISDI
Subjt:  VKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
A0A5A7TJU8 Uncharacterized protein7.7e-1660.2Show/hide
Query:  VKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
        VKR+R+R  N++CD SP+     ERKWLI   GR     KKV        ++ IRD+ RNKS +L +IQKTWRRTV+GASKVLLEKHYNTHRRLISDI
Subjt:  VKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV--------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
A0A6J1F4R1 uncharacterized protein LOC1114421012.0e-1658.42Show/hide
Query:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD
        +V ++RRRR N++C ESP+     ERKWLIP  GR     KK+          ++ IRD+ RNKS  L +IQKTWRRTV+GASKVLLEKHYNTHRRLISD
Subjt:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD

Query:  I
        I
Subjt:  I
A0A6J1J4Z4 uncharacterized protein LOC1114817932.0e-1658.42Show/hide
Query:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD
        +V ++RRRR N++C ESP+     ERKWLIP  GR     KK+          ++ IRD+ RNKS  L +IQKTWRRTV+GASKVLLEKHYNTHRRLISD
Subjt:  SVKRQRRRRVNDQCDESPA-----ERKWLIPAPGRN----KKV----------RIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISD

Query:  I
        I
Subjt:  I
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42110.1 unknown protein1.8e-0945.59Show/hide
Query:  ERKWLIPAPGRNKKVRIEIRDY-----HRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI
        ERK L+ AP  +K+  + IR       H    +L+ +I KTWR+T++GAS+V +EKHYN HRRL +D+
Subjt:  ERKWLIPAPGRNKKVRIEIRDY-----HRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTGAAGCGGCAGCGGCGGCGGAGGGTGAATGATCAGTGTGATGAGAGCCCGGCGGAGCGGAAGTGGCTGATTCCGGCGCCGGGGAGGAATAAGAAAGTTAGGAT
TGAAATTAGAGATTATCATAGAAACAAATCAAATTTACTTGCTTCCATTCAAAAGACATGGCGAAGAACAGTGGATGGGGCTTCGAAGGTTTTATTAGAGAAACATTACA
ACACCCACAGACGTTTGATAAGTGACATTGAAATTATTAGAGGAGGCTGA
mRNA sequenceShow/hide mRNA sequence
GTAATTTTGATAATGGAATTTTCAAATGGCAATGTTCAGCACATCGCTGAAAAATCCTCCGGCGCGGAAGGAGGCTGTTGATGTCGGTGAAGCGGCAGCGGCGGCGGAGG
GTGAATGATCAGTGTGATGAGAGCCCGGCGGAGCGGAAGTGGCTGATTCCGGCGCCGGGGAGGAATAAGAAAGTTAGGATTGAAATTAGAGATTATCATAGAAACAAATC
AAATTTACTTGCTTCCATTCAAAAGACATGGCGAAGAACAGTGGATGGGGCTTCGAAGGTTTTATTAGAGAAACATTACAACACCCACAGACGTTTGATAAGTGACATTG
AAATTATTAGAGGAGGCTGA
Protein sequenceShow/hide protein sequence
MSVKRQRRRRVNDQCDESPAERKWLIPAPGRNKKVRIEIRDYHRNKSNLLASIQKTWRRTVDGASKVLLEKHYNTHRRLISDIEIIRGG