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Sed0004007 (gene) of Chayote v1 genome

Gene IDSed0004007
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:4627536..4628143
RNA-Seq ExpressionSed0004007
SyntenySed0004007
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647506.1 hypothetical protein Csa_003725 [Cucumis sativus]2.6e-0650.57Show/hide
Query:  SSLLLIMVLIAATRFVLLVDSRPLRSGSTDD--HRVNNDSALPDK--PERAGSETR-----------DSGGVVFTLASGPSKRGAGH
        SS LLI+ LIAA RF L VD RPLR GS  D  H  +N SALP    PE   + T            + GGV FT+ASGPS++GAGH
Subjt:  SSLLLIMVLIAATRFVLLVDSRPLRSGSTDD--HRVNNDSALPDK--PERAGSETR-----------DSGGVVFTLASGPSKRGAGH

KAG6595007.1 hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]7.5e-1465.48Show/hide
Query:  SSSLLLIMVLIAATRFVLLVDSRPLRSGSTD-DHRVNNDSALPDKPE-RAGSETRDS---------GGVVFTLASGPSKRGAGH
        SSSLLLI+ LIAAT FVLLVD RPLRSGST+  H +NN SAL +KPE  A S T DS         GGVVFTL SGPS++GAGH
Subjt:  SSSLLLIMVLIAATRFVLLVDSRPLRSGSTD-DHRVNNDSALPDKPE-RAGSETRDS---------GGVVFTLASGPSKRGAGH

KAG6604156.1 hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1360.24Show/hide
Query:  RRSSSSLLLIMVLIAATRFVLLVDSRPLRSGSTDDH-RVNNDSAL------PDKPERAGSETRDSGGVVFTLASGPSKRGAGH
        +  +SSLLLIMVL+AATRF+ LVD RPLRSGST +H R NN SA+         PE +GS +   GGV FTLASGPS++GAGH
Subjt:  RRSSSSLLLIMVLIAATRFVLLVDSRPLRSGSTDDH-RVNNDSAL------PDKPERAGSETRDSGGVVFTLASGPSKRGAGH

TYK12856.1 hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]6.2e-0851.76Show/hide
Query:  SSLLLIMVLIAATRFVLLVDSRPLRSGS-TDDHRVNNDSALP-DKPERAGSETR-----------DSGGVVFTLASGPSKRGAGH
        SS LLI++L+AA RF L VD RPLR GS  D H V+N SA+P D PE   + T            + GGV FT+ASGPS++GAGH
Subjt:  SSLLLIMVLIAATRFVLLVDSRPLRSGS-TDDHRVNNDSALP-DKPERAGSETR-----------DSGGVVFTLASGPSKRGAGH

TrEMBL top hitse value%identityAlignment
A0A5D3CR30 Uncharacterized protein3.0e-0851.76Show/hide
Query:  SSLLLIMVLIAATRFVLLVDSRPLRSGS-TDDHRVNNDSALP-DKPERAGSETR-----------DSGGVVFTLASGPSKRGAGH
        SS LLI++L+AA RF L VD RPLR GS  D H V+N SA+P D PE   + T            + GGV FT+ASGPS++GAGH
Subjt:  SSLLLIMVLIAATRFVLLVDSRPLRSGS-TDDHRVNNDSALP-DKPERAGSETR-----------DSGGVVFTLASGPSKRGAGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGGAGCTCCTCCTCTTTACTTCTAATCATGGTCCTCATCGCCGCCACCCGGTTCGTTCTTCTCGTCGACTCCAGACCGCTCCGATCCGGTTCGACAGACGACCA
CCGTGTTAATAATGACTCGGCTCTTCCCGATAAGCCGGAAAGAGCCGGGTCGGAGACGAGAGATTCCGGTGGCGTAGTGTTTACGTTGGCTTCCGGACCGAGCAAAAGGG
GTGCTGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATAGAAATGCCAAACCCAATATTTTTTTTCATTTTGGTCCTCAATTCTTTTGGCTTTCCCCGAATATAAATTCTCCGGCGAGTGGCCGACATGAGGAGGAGCTCCTCCTC
TTTACTTCTAATCATGGTCCTCATCGCCGCCACCCGGTTCGTTCTTCTCGTCGACTCCAGACCGCTCCGATCCGGTTCGACAGACGACCACCGTGTTAATAATGACTCGG
CTCTTCCCGATAAGCCGGAAAGAGCCGGGTCGGAGACGAGAGATTCCGGTGGCGTAGTGTTTACGTTGGCTTCCGGACCGAGCAAAAGGGGTGCTGGCCATTAAAACCAA
ACATGAAGCATATTCTTTGCCCATTTCATATATTTGCCAAAATCTTTTTGGATTTATTTTCTTTTGGGTTATGTACACAATTTTTCTTATTGTAGAGATTTTACCCTTTT
TGTTTTAGTCCTATACAAAATTGTGGAAATCGAACTACAGATCTCGTGATTATGCCGTGGCAAAAACTTTTGCTGCTCTAGTTCAAATACTTGGATTGTGTATTTTAGTT
TCTAATTTTAAATAGTTTGTCATTTCTAAGACTTATATTACGTGATGATCAAGTTGGG
Protein sequenceShow/hide protein sequence
MRRSSSSLLLIMVLIAATRFVLLVDSRPLRSGSTDDHRVNNDSALPDKPERAGSETRDSGGVVFTLASGPSKRGAGH