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Sed0004055 (gene) of Chayote v1 genome

Gene IDSed0004055
OrganismSechium edule (Chayote v1)
Descriptionacanthoscurrin-2-like
Genome locationLG01:70674070..70674625
RNA-Seq ExpressionSed0004055
SyntenySed0004055
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008447334.1 PREDICTED: acanthoscurrin-2-like [Cucumis melo]1.7e-1362.71Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGG
        MAN  K  L++ +AMAA A HVAARTAPN+  +GLNDQKNFL    VGG                 GGLGGGGGLGGLGGG+GGFGGV +GGI GGVGGG
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGG

Query:  VLGGIGGVGGIGGGGGFV
        V   IGG+GGIGGGGG V
Subjt:  VLGGIGGVGGIGGGGGFV

XP_011652144.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]1.5e-1465Show/hide
Query:  MAN-KLKAILVVALAMAAFAGHVAARTAPND-GGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVG
        MAN KL  +LV+A+AMAAFA HV ART PND   +GLNDQKNFL    VGG                 GGLGGGGGLGGLGGGIGGFGGV +GGI GGVG
Subjt:  MAN-KLKAILVVALAMAAFAGHVAARTAPND-GGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVG

Query:  GGVLGGIGGVGGIGGGGGFV
        GGV   IGG+GGIGGGGG V
Subjt:  GGVLGGIGGVGGIGGGGGFV

XP_022963787.1 glycine-rich protein 5-like [Cucurbita moschata]7.0e-1259.26Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFLVGG----------IGGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGGVLGGIGGVGG
        MANKL  +L++A+AMAAFA HVAARTAP +  +GLNDQKNFL GG           GGLGGGGGLGG+GGG+GGFGGV +GGI  GVG            
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFLVGG----------IGGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGGVLGGIGGVGG

Query:  IGGGGGFV
         G GGGFV
Subjt:  IGGGGGFV

XP_023511522.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]3.1e-1260.19Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFLVGG----------IGGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGGVLGGIGGVGG
        MANKL  +L++A+AMAAFA HVAARTAP +  +GLNDQKNFL GG           GGLGGGGGLGGLGGG+GGFGGV +GGI  GVG            
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFLVGG----------IGGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGGVLGGIGGVGG

Query:  IGGGGGFV
         G GGGFV
Subjt:  IGGGGGFV

XP_038887967.1 acanthoscurrin-1-like [Benincasa hispida]1.3e-1360.83Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL-------VGGI---------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVG
        MAN  K  L++ +AMAAFA HVAARTAPN+ G+GLNDQKNFL       +GGI               GGLGGGGGLGGLGGGIGG GGV +GGI GG+G
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL-------VGGI---------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVG

Query:  GGVLGGIGGVGGIGGGGGFV
        GGV      +GGIGGGGGFV
Subjt:  GGVLGGIGGVGGIGGGGGFV

TrEMBL top hitse value%identityAlignment
A0A0A0LEM4 Uncharacterized protein7.3e-1565Show/hide
Query:  MAN-KLKAILVVALAMAAFAGHVAARTAPND-GGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVG
        MAN KL  +LV+A+AMAAFA HV ART PND   +GLNDQKNFL    VGG                 GGLGGGGGLGGLGGGIGGFGGV +GGI GGVG
Subjt:  MAN-KLKAILVVALAMAAFAGHVAARTAPND-GGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVG

Query:  GGVLGGIGGVGGIGGGGGFV
        GGV   IGG+GGIGGGGG V
Subjt:  GGVLGGIGGVGGIGGGGGFV

A0A1S3BI24 acanthoscurrin-2-like8.1e-1462.71Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGG
        MAN  K  L++ +AMAA A HVAARTAPN+  +GLNDQKNFL    VGG                 GGLGGGGGLGGLGGG+GGFGGV +GGI GGVGGG
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGG

Query:  VLGGIGGVGGIGGGGGFV
        V   IGG+GGIGGGGG V
Subjt:  VLGGIGGVGGIGGGGGFV

A0A5A7UCJ9 Acanthoscurrin-2-like8.1e-1462.71Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGG
        MAN  K  L++ +AMAA A HVAARTAPN+  +GLNDQKNFL    VGG                 GGLGGGGGLGGLGGG+GGFGGV +GGI GGVGGG
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFL----VGGI----------------GGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGG

Query:  VLGGIGGVGGIGGGGGFV
        V   IGG+GGIGGGGG V
Subjt:  VLGGIGGVGGIGGGGGFV

A0A6J1DV95 acanthoscurrin-1-like1.5e-0751.54Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPND----GGEGLNDQKNFL-----------------VGGIGGL-----------GGGGGLGGLGGGIGGFGGV
        MA K   +L++ +AMAAFA   +AR AP D     GEGL DQKN L                 VGGIGG+           GG GGLGGLGGGIGG+GG 
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPND----GGEGLNDQKNFL-----------------VGGIGGL-----------GGGGGLGGLGGGIGGFGGV

Query:  NVGGISGGVGGGVLGGIGGVGGIGGGGGFV
         +GGI  G+GGG LGGI   GGIGGGGGFV
Subjt:  NVGGISGGVGGGVLGGIGGVGGIGGGGGFV

A0A6J1HG59 glycine-rich protein 5-like3.4e-1259.26Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFLVGG----------IGGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGGVLGGIGGVGG
        MANKL  +L++A+AMAAFA HVAARTAP +  +GLNDQKNFL GG           GGLGGGGGLGG+GGG+GGFGGV +GGI  GVG            
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFLVGG----------IGGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGGVLGGIGGVGG

Query:  IGGGGGFV
         G GGGFV
Subjt:  IGGGGGFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29020.2 glycine-rich protein5.7e-0451.89Show/hide
Query:  MANKLKAILVVALAMAAFAGHVAARTAPNDG-GEGLNDQKNFL----VGGIGGLGG----GGGLGGLGGGIGGFGGV-NVGGISGGVGGGVLGGIGGVGG
        MA +  A+ +VAL ++      A R AP    G GL+DQKNF+    VGG  G+GG    G GLGG+ GG+GG  GV  VGG+ GG+GG  LGGIGGVGG
Subjt:  MANKLKAILVVALAMAAFAGHVAARTAPNDG-GEGLNDQKNFL----VGGIGGLGG----GGGLGGLGGGIGGFGGV-NVGGISGGVGGGVLGGIGGVGG

Query:  IGGGGG
        +GG GG
Subjt:  IGGGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATAAGCTTAAGGCGATTTTGGTTGTGGCTTTGGCAATGGCTGCATTTGCAGGCCATGTTGCTGCAAGAACTGCCCCAAATGATGGGGGGGAAGGCCTCAATGA
CCAAAAGAACTTCCTCGTTGGTGGCATTGGCGGACTTGGAGGGGGCGGTGGCTTAGGCGGGCTCGGAGGTGGCATCGGTGGTTTCGGAGGGGTCAATGTCGGTGGCATTA
GCGGCGGAGTTGGCGGTGGTGTGCTCGGCGGGATTGGTGGAGTTGGAGGTATTGGTGGTGGTGGTGGATTTGTTAACCCTTGA
mRNA sequenceShow/hide mRNA sequence
GGGTCTTGAAAATGGCGAATAAGCTTAAGGCGATTTTGGTTGTGGCTTTGGCAATGGCTGCATTTGCAGGCCATGTTGCTGCAAGAACTGCCCCAAATGATGGGGGGGAA
GGCCTCAATGACCAAAAGAACTTCCTCGTTGGTGGCATTGGCGGACTTGGAGGGGGCGGTGGCTTAGGCGGGCTCGGAGGTGGCATCGGTGGTTTCGGAGGGGTCAATGT
CGGTGGCATTAGCGGCGGAGTTGGCGGTGGTGTGCTCGGCGGGATTGGTGGAGTTGGAGGTATTGGTGGTGGTGGTGGATTTGTTAACCCTTGACGAAGTGAAGCTTAAG
GGGTTTATAAGCTTGGTGTGTCTTTATTAGGAATTATTAAAGGAATTATATATAATTCCTAGTTTTCCTAATAGTCTTGATGTTGTTTTTAGGTTTTTTTTTTTTGTAAT
GTTTGGAATAATTGTTAACCCACAAATTGTGGTTAACGTCCTATTAAGATGTTACTTGAGTTATGCTCGTGTGAATGATTGAATATCTGTTAATTTGTTCTTCATGATCT
TGTGAG
Protein sequenceShow/hide protein sequence
MANKLKAILVVALAMAAFAGHVAARTAPNDGGEGLNDQKNFLVGGIGGLGGGGGLGGLGGGIGGFGGVNVGGISGGVGGGVLGGIGGVGGIGGGGGFVNP