CuGenDBv2

Gene ID	Sed0004057
Organism	Sechium edule (Chayote v1)
Description	F-box/LRR-repeat protein At4g29420
Genome location	LG04:39335994..39338751
RNA-Seq Expression	Sed0004057
Synteny	Sed0004057
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily IPR036047 - F-box-like domain superfamily IPR044809 - F-box protein AUF1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_016900301.1 PREDICTED: F-box/LRR-repeat protein At4g29420 [Cucumis melo]

1.5e-215

84.44

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRL+DSADLARCRVASK LN LSR+VRSVNLFCSLDRYL+SRA ET+LLVTPFK +LK L+NDF+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VG+A EWLPAIG++LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL R+ SLK LTLEFIRLDDEDLS++N NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I APSLSKLELKCVKPK LIIETPMLSDFHFCLEDASGLQV+EFPCLRKL LHFPCL++LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVK CLDT+FEIFPNL FLKLG GVLSEAETCYQAEGLE ++GMRDLKK H+S  KT + ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS
        SFDM LL+Y+N DSD+ GGI+SK A+N  R RWRWELWK+GSREAWAKG+
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS

XP_022945179.1 F-box/LRR-repeat protein At4g29420 [Cucurbita moschata]

5.8e-223

87.75

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRL+DSADLARCRVASK LN LSREVRSVNLFCSLDRYL+SRA ETRLLV PFK +LK LMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VGFA EWLPAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGL RL SLK LTLEFIRLDDEDLS+VN+NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLE+LNLIGVGGLNEPKIHL HLKTCRWTVSNAPVSL+I APSLSKLELKCVKPKSLII+TPMLSDFHFCL+DASGLQVNEFPCLRKLQLHFPCLY+LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVKLCLDTLFEIFPNLSFLKLG GVLSEAETCYQAEGL+ +IGMRDLKK HAS  +TY+ ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG
        S DMELLIYRN DS +AGGI+SK AVNHPR +WRWELWKEG +E WAKG
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG

XP_022966761.1 F-box/LRR-repeat protein At4g29420 [Cucurbita maxima]

3.5e-220

86.86

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRLSDSADLARCRVASK LN LSREVRSVNLFCSLDRYL+SRA ETRLLV PFK +LK LMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VGFA EWLPAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGL RL SLK LTLEFIRLDDEDLS+VN+NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLE+LNLIGVGGLNEPKIHL  LKTCRWTVSNAPVSL+I APSLSKLELKCVKPKSLII+TPM+SDFHFCL+DASGLQVNEFPCLRKLQLHFPCLY+LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVKLCLDTLFEIFPNLSFLKLG GV SEAETCYQAEGL+ +IGMRDLKK HAS  +TY+ ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG
        S  MELLIY N DS +AGGI+SK AVNHPR +WRWELWKEG +E WAKG
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG

XP_023542813.1 F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo]

4.1e-221

87.08

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRL+DSADLARCRVASK LN LSREVRSVNLFCSLDRYL+SRA ETRLLV PFK +LK LMNDFVALDSVSIGVEKSLGRISY HDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VGFA EWLPAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGL RL SLK LTLEFIRLDDEDLS+VN+NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLE+LNLIGVGGLNEPKIHL HLKTCRWTVSNAPVSL+I APSLSKLELKCVKPKSLII+TPMLSDFHFCL+DASGLQVNEFPCLRKLQLHFPCLY+LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVKLCLDTLFEIFPNLSFLKLG GV SEAETCYQAEGL+ +IGMRDLKK HAS  +TY+ ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG
        S DMELLIY N DS +AGGI+SK AVNHPR +WRWELWKEG +E WAKG
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG

XP_038893164.1 F-box/LRR-repeat protein At4g29420 [Benincasa hispida]

1.5e-218

85.33

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPP LVLEILNRL+DSADLARCRVASK LN LSREVRSVNLFCSLDRYL+SRA ET+LLVTPFK +LK LMNDF+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VG+A EWLPAIGR+LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL R+ SLK LTLEFIRLDDEDLS+VN NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLEVLNL+GVGGLNEPKIHLLHLKTC+W VSNAPVSL+I APSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVN FPCLRKL LH PCL +LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAES+ESVK CLDT+FEIFPNLSFLKLG GVLSEAETCYQAEGLE ++GMRDLKK H+S  KTY+ E+KLPFIISILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS
         FDM LL+Y N DSDI GGI+ K A NHPR RWRWELWKEGS EAWAKG+
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPS5 Uncharacterized protein

8.4e-212

83.33

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRL+DSADLARCRVASK +N LSR+VRSVNLFCSLDRYL+SRA ET+LLVTPFK +LK L+N+F+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VG+A EWLP+IG++LTSLSIVDFWVQSCWRQSKILALIT  C NLLELELKNAWLSVDGL R+ SLK LTLEFIRLDDEDLS++N NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I APSLSKLELKCVKPK LIIETPMLSDFHFCLEDASGLQV+EFPCLRKL LHFP L++LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RT+KELTL T QRAES+ESVK CLDT+FEIFPNLSFLKLG GVL EAET YQAEGLE ++GMRDLKK + S+ KT + ELKLPFIISILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS
        SFDM LL+Y+N DSDI GGI+SK A+NH R RWRWELWKEGSREAWAKG+
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS

A0A1S4DWD1 F-box/LRR-repeat protein At4g29420

7.4e-216

84.44

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRL+DSADLARCRVASK LN LSR+VRSVNLFCSLDRYL+SRA ET+LLVTPFK +LK L+NDF+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VG+A EWLPAIG++LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL R+ SLK LTLEFIRLDDEDLS++N NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I APSLSKLELKCVKPK LIIETPMLSDFHFCLEDASGLQV+EFPCLRKL LHFPCL++LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVK CLDT+FEIFPNL FLKLG GVLSEAETCYQAEGLE ++GMRDLKK H+S  KT + ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS
        SFDM LL+Y+N DSD+ GGI+SK A+N  R RWRWELWK+GSREAWAKG+
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS

A0A5D3CX32 F-box/LRR-repeat protein

7.4e-216

84.44

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRL+DSADLARCRVASK LN LSR+VRSVNLFCSLDRYL+SRA ET+LLVTPFK +LK L+NDF+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VG+A EWLPAIG++LTSLSIVDFWVQSCWRQSKILALIT CC NLLELELKNAWLSVDGL R+ SLK LTLEFIRLDDEDLS++N NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I APSLSKLELKCVKPK LIIETPMLSDFHFCLEDASGLQV+EFPCLRKL LHFPCL++LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVK CLDT+FEIFPNL FLKLG GVLSEAETCYQAEGLE ++GMRDLKK H+S  KT + ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS
        SFDM LL+Y+N DSD+ GGI+SK A+N  R RWRWELWK+GSREAWAKG+
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKGS

A0A6J1G095 F-box/LRR-repeat protein At4g29420

2.8e-223

87.75

Show/hide

Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRL+DSADLARCRVASK LN LSREVRSVNLFCSLDRYL+SRA ETRLLV PFK +LK LMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VGFA EWLPAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGL RL SLK LTLEFIRLDDEDLS+VN+NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLE+LNLIGVGGLNEPKIHL HLKTCRWTVSNAPVSL+I APSLSKLELKCVKPKSLII+TPMLSDFHFCL+DASGLQVNEFPCLRKLQLHFPCLY+LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVKLCLDTLFEIFPNLSFLKLG GVLSEAETCYQAEGL+ +IGMRDLKK HAS  +TY+ ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG
        S DMELLIYRN DS +AGGI+SK AVNHPR +WRWELWKEG +E WAKG
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG

A0A6J1HNV0 F-box/LRR-repeat protein At4g29420

1.7e-220

86.86

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Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPPSLVLEILNRLSDSADLARCRVASK LN LSREVRSVNLFCSLDRYL+SRA ETRLLV PFK +LK LMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
        VEDWS DLFL +VGFA EWLPAIGR LTSLSIVDFWVQSCWRQSKILALIT CC NL ELELKNAWLSVDGL RL SLK LTLEFIRLDDEDLS+VN+NF
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        PHLE+LNLIGVGGLNEPKIHL  LKTCRWTVSNAPVSL+I APSLSKLELKCVKPKSLII+TPM+SDFHFCL+DASGLQVNEFPCLRKLQLHFPCLY+LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD
        TTFSS RTIKELTL T QRAESVESVKLCLDTLFEIFPNLSFLKLG GV SEAETCYQAEGL+ +IGMRDLKK HAS  +TY+ ELKLPFII ILEKCTD
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTD

Query:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG
        S  MELLIY N DS +AGGI+SK AVNHPR +WRWELWKEG +E WAKG
Subjt:  SFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAWAKG

SwissProt top hits

e value

%identity

Alignment

Q9M0E1 F-box/LRR-repeat protein At4g29420

3.6e-111

47.79

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Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDELPP L ++IL+R++DS  LARCRVASK LN+LSREVR+VNL C+  RYL+SR   + ++VTPFK + + L+ +   + S+S+GV+K+L  +S++  +
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
         ED S DL+L +V F  EWLP +  DL +LSI DFW+QSCWR+S ILALI+  C  L++LE+KNAWLSV GL  + +L+ LTLEFIRLDDE+L KVN  F
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        P L+ LNLIGVGGL EP+IH LHLK+C WTVSNAP+SL I AP+L +L+LKC KPKSL++ETP L   H  +EDA G+   EF  L+ L+L  P +Y LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAE-GLERQIGMRDLKKFHA-----SHNKTYEFELKLPFIISI
        +  S    IK+L + + +  E  E ++L L T+ + FP ++ L L     S+ ET +Q++ GL    G   LK+  A      H   ++    + FI SI
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAE-GLERQIGMRDLKKFHA-----SHNKTYEFELKLPFIISI

Query:  LEKCTDSFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAW
        + K     DM L+I+++ D  +   ++S   +++PR RW+W +W EG  + W
Subjt:  LEKCTDSFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAW

Arabidopsis top hits

e value

%identity

Alignment

AT1G78100.1 F-box family protein

1.0e-04

25.68

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Query:  DELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPET----------RLLVTPFKDVLKRLMNDFVALDSVSIGVEKSL
        D +P  +V++ILNR+ D   L RCR  SK  N+L+   +S +L   LD+ L +   ++          R L      +L  + +     D +     K+ 
Subjt:  DELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPET----------RLLVTPFKDVLKRLMNDFVALDSVSIGVEKSL

Query:  GRISYEHDDVEDWSADLF----LMEVGFASEWLPAIGRDLTSLSIVDF
         +I    + + +   +L+     +E G A +W    G+ L S  IV F
Subjt:  GRISYEHDDVEDWSADLF----LMEVGFASEWLPAIGRDLTSLSIVDF

AT4G29420.1 F-box/RNI-like superfamily protein

2.6e-112

47.79

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Query:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDELPP L ++IL+R++DS  LARCRVASK LN+LSREVR+VNL C+  RYL+SR   + ++VTPFK + + L+ +   + S+S+GV+K+L  +S++  +
Subjt:  MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF
         ED S DL+L +V F  EWLP +  DL +LSI DFW+QSCWR+S ILALI+  C  L++LE+KNAWLSV GL  + +L+ LTLEFIRLDDE+L KVN  F
Subjt:  VEDWSADLFLMEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNF

Query:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI
        P L+ LNLIGVGGL EP+IH LHLK+C WTVSNAP+SL I AP+L +L+LKC KPKSL++ETP L   H  +EDA G+   EF  L+ L+L  P +Y LI
Subjt:  PHLEVLNLIGVGGLNEPKIHLLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLI

Query:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAE-GLERQIGMRDLKKFHA-----SHNKTYEFELKLPFIISI
        +  S    IK+L + + +  E  E ++L L T+ + FP ++ L L     S+ ET +Q++ GL    G   LK+  A      H   ++    + FI SI
Subjt:  TTFSSTRTIKELTLVTTQRAESVESVKLCLDTLFEIFPNLSFLKLGRGVLSEAETCYQAE-GLERQIGMRDLKKFHA-----SHNKTYEFELKLPFIISI

Query:  LEKCTDSFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAW
        + K     DM L+I+++ D  +   ++S   +++PR RW+W +W EG  + W
Subjt:  LEKCTDSFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKEGSREAW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGAGCTTCCGCCGTCGTTAGTTCTCGAAATCCTGAATCGATTGTCCGATTCCGCCGATTTGGCTCGGTGTCGAGTCGCTTCCAAGCATCTCAATGCGCTCTCACG
CGAGGTTAGGTCCGTGAATCTCTTCTGTTCTTTGGATCGATACCTCAGATCTAGGGCTCCGGAGACGAGGCTGCTGGTTACTCCTTTCAAGGATGTATTGAAGAGGCTGA
TGAACGATTTTGTGGCTCTCGATTCTGTGTCGATCGGCGTGGAGAAGTCGCTCGGACGGATTTCGTATGAGCATGACGATGTTGAGGATTGGTCTGCCGATTTGTTCTTG
ATGGAAGTTGGATTTGCTAGTGAATGGCTGCCGGCGATTGGACGAGATTTGACGTCCTTGTCGATCGTTGATTTTTGGGTTCAATCATGCTGGAGACAATCCAAGATTTT
GGCGCTAATTACTTACTGTTGCCATAATCTTCTGGAACTTGAATTGAAGAATGCTTGGTTGTCTGTGGATGGTCTGATCAGATTGACTTCCCTCAAAAGTCTGACCCTTG
AGTTTATAAGATTAGACGACGAAGATCTGAGCAAGGTTAACTTTAACTTCCCTCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCAT
CTGTTGCACCTTAAAACCTGTCGATGGACAGTGTCGAATGCTCCAGTTTCACTGACCATACGTGCACCGAGCCTTTCGAAACTTGAACTCAAGTGTGTCAAACCAAAATC
TCTTATCATCGAAACTCCCATGCTCTCTGATTTCCATTTCTGTCTAGAAGATGCAAGTGGGTTACAAGTTAATGAATTTCCTTGCCTGAGAAAACTTCAGCTTCATTTTC
CATGTCTTTACAATCTCATAACAACATTTTCATCTACAAGAACTATAAAGGAACTCACACTGGTTACAACGCAACGTGCTGAATCTGTTGAATCTGTTAAGCTCTGCCTC
GATACACTGTTCGAAATATTCCCAAATCTTAGCTTTCTTAAATTAGGCCGTGGAGTTTTATCCGAAGCCGAGACTTGTTATCAAGCTGAAGGTTTGGAAAGACAGATAGG
GATGAGAGATTTGAAAAAGTTCCATGCTAGCCACAATAAAACCTACGAGTTTGAGCTAAAACTTCCATTTATCATTTCCATTCTGGAAAAATGTACCGACTCCTTCGATA
TGGAATTGCTCATCTATCGTAATGTCGATTCTGACATTGCTGGCGGAATCGTGTCAAAACATGCAGTTAATCATCCAAGATCAAGATGGAGATGGGAACTGTGGAAGGAA
GGATCAAGAGAAGCGTGGGCTAAGGGCAGCTAA

mRNA sequence

Show/hide mRNA sequence

GGTGTTAGAAATCCCATTTTTTGTATCTTCGTATTTGTCCGTACAGAAGAAACCAAAACGAATATTCTCTCAACAGTGATTTCGTTGATCGCAATGATCGAACCTCACCG
TCGGCGAAGATTTTCATAAATTCCTCGCCAGAAACTTCACAGAATCCATAACCGTTCTTCCGATTTCCGCCATGGACGAGCTTCCGCCGTCGTTAGTTCTCGAAATCCTG
AATCGATTGTCCGATTCCGCCGATTTGGCTCGGTGTCGAGTCGCTTCCAAGCATCTCAATGCGCTCTCACGCGAGGTTAGGTCCGTGAATCTCTTCTGTTCTTTGGATCG
ATACCTCAGATCTAGGGCTCCGGAGACGAGGCTGCTGGTTACTCCTTTCAAGGATGTATTGAAGAGGCTGATGAACGATTTTGTGGCTCTCGATTCTGTGTCGATCGGCG
TGGAGAAGTCGCTCGGACGGATTTCGTATGAGCATGACGATGTTGAGGATTGGTCTGCCGATTTGTTCTTGATGGAAGTTGGATTTGCTAGTGAATGGCTGCCGGCGATT
GGACGAGATTTGACGTCCTTGTCGATCGTTGATTTTTGGGTTCAATCATGCTGGAGACAATCCAAGATTTTGGCGCTAATTACTTACTGTTGCCATAATCTTCTGGAACT
TGAATTGAAGAATGCTTGGTTGTCTGTGGATGGTCTGATCAGATTGACTTCCCTCAAAAGTCTGACCCTTGAGTTTATAAGATTAGACGACGAAGATCTGAGCAAGGTTA
ACTTTAACTTCCCTCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCATCTGTTGCACCTTAAAACCTGTCGATGGACAGTGTCGAAT
GCTCCAGTTTCACTGACCATACGTGCACCGAGCCTTTCGAAACTTGAACTCAAGTGTGTCAAACCAAAATCTCTTATCATCGAAACTCCCATGCTCTCTGATTTCCATTT
CTGTCTAGAAGATGCAAGTGGGTTACAAGTTAATGAATTTCCTTGCCTGAGAAAACTTCAGCTTCATTTTCCATGTCTTTACAATCTCATAACAACATTTTCATCTACAA
GAACTATAAAGGAACTCACACTGGTTACAACGCAACGTGCTGAATCTGTTGAATCTGTTAAGCTCTGCCTCGATACACTGTTCGAAATATTCCCAAATCTTAGCTTTCTT
AAATTAGGCCGTGGAGTTTTATCCGAAGCCGAGACTTGTTATCAAGCTGAAGGTTTGGAAAGACAGATAGGGATGAGAGATTTGAAAAAGTTCCATGCTAGCCACAATAA
AACCTACGAGTTTGAGCTAAAACTTCCATTTATCATTTCCATTCTGGAAAAATGTACCGACTCCTTCGATATGGAATTGCTCATCTATCGTAATGTCGATTCTGACATTG
CTGGCGGAATCGTGTCAAAACATGCAGTTAATCATCCAAGATCAAGATGGAGATGGGAACTGTGGAAGGAAGGATCAAGAGAAGCGTGGGCTAAGGGCAGCTAAGCTGTC
ATCTGTGTTTGTCATAGTGGTGGAACAAACTTTTGCTCCTAAAGGTGCAAAGCTTCAAAAGATGGAAATCCATGTTAATTTAGAAGTTTAGCCTTCCCTCTTTTTTGAAT
TTGGCTGACTTATGGGGGTTGTAAGATAAGTTCCACATCAATGGAATGAGC

Protein sequence

Show/hide protein sequence

MDELPPSLVLEILNRLSDSADLARCRVASKHLNALSREVRSVNLFCSLDRYLRSRAPETRLLVTPFKDVLKRLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSADLFL
MEVGFASEWLPAIGRDLTSLSIVDFWVQSCWRQSKILALITYCCHNLLELELKNAWLSVDGLIRLTSLKSLTLEFIRLDDEDLSKVNFNFPHLEVLNLIGVGGLNEPKIH
LLHLKTCRWTVSNAPVSLTIRAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNEFPCLRKLQLHFPCLYNLITTFSSTRTIKELTLVTTQRAESVESVKLCL
DTLFEIFPNLSFLKLGRGVLSEAETCYQAEGLERQIGMRDLKKFHASHNKTYEFELKLPFIISILEKCTDSFDMELLIYRNVDSDIAGGIVSKHAVNHPRSRWRWELWKE
GSREAWAKGS

Sed0004057 (gene) of Chayote v1 genome