; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004058 (gene) of Chayote v1 genome

Gene IDSed0004058
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:46387579..46388645
RNA-Seq ExpressionSed0004058
SyntenySed0004058
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059605.1 hypothetical protein E6C27_scaffold54G00270 [Cucumis melo var. makuwa]3.0e-6279.75Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPD--SAQTLRRRLSSISFKIQPISSPVTSW-SFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEM---
        M S+P R FLPT PLNDALP+S PD  S+QTLRRRLSSISFKI PISSP+TSW SF RSKSVSS+RDFT TSLRKWWDWGWSWILSRK+A ARDLEM   
Subjt:  MASVPRRSFLPTRPLNDALPVSAPD--SAQTLRRRLSSISFKIQPISSPVTSW-SFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEM---

Query:  NDEGITKSLGSN--CRGN--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLK
        ND+  TK+LGSN  CRG+  F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFD+G+K
Subjt:  NDEGITKSLGSN--CRGN--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLK

KAG7022775.1 hypothetical protein SDJN02_16511, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-7290.91Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT
        M S+PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSWSF RSKSVSSLRD TG SLRKWWDWGWSWILSRKAA ARDLEMNDE  T
Subjt:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT

Query:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS
        KSL SNCRG+FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFD+G+KS
Subjt:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS

XP_022135907.1 uncharacterized protein LOC111007745 [Momordica charantia]2.1e-6884.42Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT
        M  VPRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G+SLRKWWDWGWSWILSRKA  A+DLE+ND+  T
Subjt:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT

Query:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS
        KSLGSNCRG++RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFD+G+K+
Subjt:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS

XP_022928235.1 uncharacterized protein LOC111435129 [Cucurbita moschata]9.3e-7289.61Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT
        M S+PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSWSF RSKSVSSLRD TG SLRKWWDWGWSWILSRKAA ARDLEMNDE  T
Subjt:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT

Query:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS
        KSL SNCRG+FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFD+G+++
Subjt:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS

XP_038888269.1 uncharacterized protein LOC120078122 [Benincasa hispida]1.4e-7288.96Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT
        MAS+PRRSFLPTRPLNDALPVS PDSAQT+RRRLSSISFKIQPISSPV SW F RSKSVSS+RDFTG+SLRKWWDWGWSWILSRKAA  RDLEMNDE  T
Subjt:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT

Query:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS
        K+LGSNCRG+FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFD+G++S
Subjt:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS

TrEMBL top hitse value%identityAlignment
A0A0A0K1L8 Uncharacterized protein1.1e-6279.14Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPD--SAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMND--
        M S+P R FLPT PLNDALP+S P   S QTLRRRLSSISFKI PISSP+TSWSFPRSKS+SS+RDFT TSLRKWWDWGWSWILSRKAA ARDLEMND  
Subjt:  MASVPRRSFLPTRPLNDALPVSAPD--SAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMND--

Query:  --EGITKSLGS--NCRGN--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLK
          E  TK+LGS  + RG+  F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFD+G+K
Subjt:  --EGITKSLGS--NCRGN--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLK

A0A2I4FBL9 uncharacterized protein LOC1089972841.6e-4865.31Show/hide
Query:  RSFLPTRPLNDALPVSAPDS-AQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGITKSLGS
        RSF+P  P   ALPVS  DS  Q LRRRLSS+S KIQPI+SP TSW+F RSKSVSS+ ++ G+S+R+WWDWGWSWILSRK   A+DLE+N+E   K LGS
Subjt:  RSFLPTRPLNDALPVSAPDS-AQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGITKSLGS

Query:  NCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGL
        + +G++RH+FYKVRSE RKL+ SD VGLPQT++YDS NYS+NFD+G+
Subjt:  NCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGL

A0A5A7V189 Uncharacterized protein1.4e-6279.75Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPD--SAQTLRRRLSSISFKIQPISSPVTSW-SFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEM---
        M S+P R FLPT PLNDALP+S PD  S+QTLRRRLSSISFKI PISSP+TSW SF RSKSVSS+RDFT TSLRKWWDWGWSWILSRK+A ARDLEM   
Subjt:  MASVPRRSFLPTRPLNDALPVSAPD--SAQTLRRRLSSISFKIQPISSPVTSW-SFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEM---

Query:  NDEGITKSLGSN--CRGN--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLK
        ND+  TK+LGSN  CRG+  F+HLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFD+G+K
Subjt:  NDEGITKSLGSN--CRGN--FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLK

A0A6J1C433 uncharacterized protein LOC1110077451.0e-6884.42Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT
        M  VPRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G+SLRKWWDWGWSWILSRKA  A+DLE+ND+  T
Subjt:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT

Query:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS
        KSLGSNCRG++RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFD+G+K+
Subjt:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS

A0A6J1ER56 uncharacterized protein LOC1114351294.5e-7289.61Show/hide
Query:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT
        M S+PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSWSF RSKSVSSLRD TG SLRKWWDWGWSWILSRKAA ARDLEMNDE  T
Subjt:  MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGIT

Query:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS
        KSL SNCRG+FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFD+G+++
Subjt:  KSLGSNCRGNFRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17300.1 unknown protein3.0e-2042.4Show/hide
Query:  ALPVSA--PDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAI-ARDLEMNDEGITKSLGSNCRGNFRHL
        +LP+S+   D    LRRRLSS+S  +        S    RSKSVS + +  G+S+++WW+W WSWIL +K  I   DLE+N      SLG+  RG+F H+
Subjt:  ALPVSA--PDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAI-ARDLEMNDEGITKSLGSNCRGNFRHL

Query:  FYKVRSEFRKLIRSDRVGLPQTFKY
        F+K+RSE R+L+R     LP + K+
Subjt:  FYKVRSEFRKLIRSDRVGLPQTFKY

AT4G35320.1 unknown protein8.5e-2344.54Show/hide
Query:  SAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGITKSLGSNCRGNFRHLFYKVRSE
        +A D    +RRRLSS+S  +    + + +  FPRSKSVS++ +  G+S+++WW+WGWSWILSRK    RDLE+N +   KS+GS  RG+  H+F+K+RS+
Subjt:  SAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGITKSLGSNCRGNFRHLFYKVRSE

Query:  FRKLI-RSDRVGLPQTFKY
         R  +  S    LP + KY
Subjt:  FRKLI-RSDRVGLPQTFKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTTCCACGGCGGAGCTTTCTGCCGACGCGTCCTCTCAACGACGCCCTCCCTGTCTCGGCGCCGGACTCCGCTCAAACCCTACGCCGACGGCTCTCCTCCAT
TTCCTTCAAGATCCAGCCGATTTCCTCGCCGGTCACTTCCTGGTCCTTTCCTAGATCCAAATCTGTGTCGTCTTTGCGCGATTTCACCGGCACCTCGCTCCGGAAGTGGT
GGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCCGCCATCGCTCGAGATCTGGAGATGAACGACGAAGGAATCACTAAATCTCTCGGATCTAATTGCAGAGGAAAT
TTCAGGCATCTCTTCTATAAGGTTAGGTCTGAATTTCGTAAACTAATTCGATCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCCAAGAA
TTTCGATGAAGGACTGAAATCTTAG
mRNA sequenceShow/hide mRNA sequence
TAATGATCTCCAACCCCCCACCCGCCAAAACCGAATAAAACTCCCTTCCCTGCCAAACACATCTCTCACTTCTCCCTTTCTCTCTACTTTTCCGATCACCGGCCCCGCCC
TTCCTCCGCCGCCGCCGCCATGGCTTCCGTTCCACGGCGGAGCTTTCTGCCGACGCGTCCTCTCAACGACGCCCTCCCTGTCTCGGCGCCGGACTCCGCTCAAACCCTAC
GCCGACGGCTCTCCTCCATTTCCTTCAAGATCCAGCCGATTTCCTCGCCGGTCACTTCCTGGTCCTTTCCTAGATCCAAATCTGTGTCGTCTTTGCGCGATTTCACCGGC
ACCTCGCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCCGCCATCGCTCGAGATCTGGAGATGAACGACGAAGGAATCACTAAATCTCTCGG
ATCTAATTGCAGAGGAAATTTCAGGCATCTCTTCTATAAGGTTAGGTCTGAATTTCGTAAACTAATTCGATCCGATCGCGTCGGTCTTCCTCAAACTTTCAAATACGATT
CGGTTAATTACTCCAAGAATTTCGATGAAGGACTGAAATCTTAGGTTGCTTTTCACTGTGAAAATCGATTCTATGCGTTTGAAGAAACTCAGATTTACGTATTGAATAAT
ATGCTCTGTTTTAAGCTAGATTCAGAACAGGGATATATAGCAAGAAAAATAGCTTCCGATTCCGGCCATGGAGGCCTCTGATCTTTACTGCGATTGTTGCTGGTAATCGA
TTTGGTGAAATCAACCTGTTCATTGTGTTCATTGATTTGTTCTTCGCTTGATCGGAACTCAGATCGCACATTTGATTGCTCGCCGGTTCTGTGTTGAAGAAGAACATACA
GATTTCAGAGATCTAAAATTCATCGCAAATTATGAGATCAGAGAGTTTGAAGTACATAAGAATTCTACTTCTTTTTTTTTGCAGATTTTGCCTTTTGTTTGTATAAGCAA
CGTAAAATTCCTTTTGCTCTTATTGTTTGAATAGTTTTTTTTTTCTTCCGTCATCCAATATAATTCCGATTCTGTGA
Protein sequenceShow/hide protein sequence
MASVPRRSFLPTRPLNDALPVSAPDSAQTLRRRLSSISFKIQPISSPVTSWSFPRSKSVSSLRDFTGTSLRKWWDWGWSWILSRKAAIARDLEMNDEGITKSLGSNCRGN
FRHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDEGLKS