CuGenDBv2

Gene ID	Sed0004084
Organism	Sechium edule (Chayote v1)
Description	HIG1 domain-containing protein
Genome location	LG03:2128868..2129603
RNA-Seq Expression	Sed0004084
Synteny	Sed0004084
Gene Ontology terms	GO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process) GO:0005746 - mitochondrial respirasome (cellular component) GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
InterPro domains	IPR007667 - Hypoxia induced protein, domain IPR040153 - Respiratory supercomplex factor 2, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052029.1 respiratory supercomplex factor 2-like protein [Cucumis melo var. makuwa]

1.7e-28

95.71

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
        MEAIQ WVS+HKLT+IGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK

KAG6578469.1 hypothetical protein SDJN03_22917, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-27

83.13

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQSQV
        MEAIQ WVSQHKLTSIGALWASG+GASLAYTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+NK+A   +    S V
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQSQV

KAG7016034.1 BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-27

83.13

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQSQV
        MEAIQ WVSQHKLTSIGALWASG+GASLAYTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+NK+A   +    S V
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQSQV

KAG7033273.1 hypothetical protein SDJN02_07327, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.2e-27

75.82

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQSQVSASALAAK
        MEAIQ W+S+HKLTSIGALWASG+GASL YT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ +    A   D+++VSASA+  K
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQSQVSASALAAK

XP_004138401.1 uncharacterized protein LOC101218681 [Cucumis sativus]

4.9e-28

94.29

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
        MEAIQ WVS+HKLT+IGALWASG+GASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7T4 HIG1 domain-containing protein

2.4e-28

94.29

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
        MEAIQ WVS+HKLT+IGALWASG+GASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK

A0A540LHQ1 HIG1 domain-containing protein

7.1e-25

81.08

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATA
        MEAIQ+WVS+HKLTSIG +WAS +GASLAY+++RTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+   A A
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATA

A0A5A7UEZ1 Respiratory supercomplex factor 2-like protein

8.1e-29

95.71

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
        MEAIQ WVS+HKLT+IGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK

A0A5N5F021 HIG1 domain-containing protein

3.2e-25

81.08

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATA
        MEAIQ+WVS+HKLTSIG +WAS +GASLAY+R+RTPLKPSLRLIHARMHAQALTLAVLSGAA+YHYY++  A A
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATA

A0A7J7I509 HIG1 domain-containing protein

1.9e-25

84.29

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Query:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK
        MEA+Q+WVS+HKLTSIG LWASG+GASLAY+R++TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ +
Subjt:  MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05550.1 Hypoxia-responsive family protein

6.3e-18

58.57

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Query:  EAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKT
        E I+ WVS HKL ++G LW SG+  S+AY  S+  +K S+++IHAR+HAQALTLA L+GAAV  YYD+KT
Subjt:  EAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKT

AT5G27760.1 Hypoxia-responsive family protein

2.7e-16

51.95

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Query:  IQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQ
        I+ W+ +HKL ++G LW SG+  S+AY  S+  +K S+R+IHAR+HAQALTLA L+GAA   YYD+K    + ATD+
Subjt:  IQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQ

Sequences

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CDS sequence

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ATGGAAGCTATTCAAACCTGGGTTTCTCAACACAAACTCACCAGCATTGGAGCATTATGGGCATCTGGGATGGGAGCATCACTGGCTTATACCCGATCAAGAACTCCCCT
GAAACCAAGTCTTCGCCTTATCCATGCCAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGATAACAAAACCGCCACTG
CCGCTGCCGCCACCGACCAATCTCAAGTTTCTGCTTCTGCCCTGGCGGCGAAGTAG

mRNA sequence

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TTGTCATTAATATTAATATCAAAACAACTCACAAAAATGGAAGCTATTCAAACCTGGGTTTCTCAACACAAACTCACCAGCATTGGAGCATTATGGGCATCTGGGATGGG
AGCATCACTGGCTTATACCCGATCAAGAACTCCCCTGAAACCAAGTCTTCGCCTTATCCATGCCAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCG
CCGTCTACCACTACTACGATAACAAAACCGCCACTGCCGCTGCCGCCACCGACCAATCTCAAGTTTCTGCTTCTGCCCTGGCGGCGAAGTAGGAACAATCACCCGGAGGA
ATTGGATGGATTTATATGTATAATTAAGCCTAGTTGGATCATTTTGTGTTAAATCAAATCAAGGATGCTAATTAGATTCCATCCTTTTTAATTAATGTGTCTGTAGCCTT
AAATGGCATAGCTTTAAGCTCCATCACTCGCCTTTATCTTTCAAAATATTTTAATTCCTACTTTGCTTTGCTTCTCAAAATATATATATTTTTTGGAAAATAACTTTTCC
ATCACCTTTTTAGTAATTCAATTTAAC

Protein sequence

Show/hide protein sequence

MEAIQTWVSQHKLTSIGALWASGMGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYDNKTATAAAATDQSQVSASALAAK

Sed0004084 (gene) of Chayote v1 genome