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Sed0004098 (gene) of Chayote v1 genome

Gene IDSed0004098
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG12:28189246..28193128
RNA-Seq ExpressionSed0004098
SyntenySed0004098
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588096.1 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.7e-12982.91Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LSTL I ESS S            + F  K  P++ LR    H  AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPELL WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAG+REYFADPTTLLVAQ+ LMGWVEGRRWAD+VNPGSVDVD KLPHKKKP PDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

XP_008450947.1 PREDICTED: photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucumis melo]1.9e-12883.27Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LS+  I ESS             R  F   + P HKLR D    KAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPE L WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAGSREYFADPTTLLVAQ+ALMGWVEGRRWADLVNPGSVDVD KLPHKKK K DV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAF+S
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

XP_022929235.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucurbita moschata]3.3e-12881.82Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LSTL I   SS S   + +             P++ LR    H  AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPELL WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAG+REYFADPTTLLVAQ+ LMGWVEGRRWAD+VNPGSVDVD KLPHKKKP PDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

XP_022929243.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata]8.7e-12982.91Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LSTL I ESS S            + F  K  P++ LR    H  AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPELL WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAG+REYFADPTTLLVAQ+ LMGWVEGRRWAD+VNPGSVDVD KLPHKKKP PDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

XP_022967968.1 photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita maxima]3.3e-12882.55Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LS+L I ESS S  +L+         F  K  P++ LR    H  AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPELL WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAG+REYFADPTTLLVAQ+ LMGWVEGRRWAD+VNPG VDVD KLPHKKKP PDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

TrEMBL top hitse value%identityAlignment
A0A1S3BQD6 Chlorophyll a-b binding protein, chloroplastic9.3e-12983.27Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LS+  I ESS             R  F   + P HKLR D    KAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPE L WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAGSREYFADPTTLLVAQ+ALMGWVEGRRWADLVNPGSVDVD KLPHKKK K DV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAF+S
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

A0A5A7UKU4 Chlorophyll a-b binding protein, chloroplastic9.3e-12983.27Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LS+  I ESS             R  F   + P HKLR D    KAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPE L WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAGSREYFADPTTLLVAQ+ALMGWVEGRRWADLVNPGSVDVD KLPHKKK K DV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAF+S
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

A0A6J1ERI7 Chlorophyll a-b binding protein, chloroplastic4.2e-12982.91Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LSTL I ESS S            + F  K  P++ LR    H  AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPELL WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAG+REYFADPTTLLVAQ+ LMGWVEGRRWAD+VNPGSVDVD KLPHKKKP PDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

A0A6J1ETS8 Chlorophyll a-b binding protein, chloroplastic1.6e-12881.82Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LSTL I   SS S   + +             P++ LR    H  AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPELL WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAG+REYFADPTTLLVAQ+ LMGWVEGRRWAD+VNPGSVDVD KLPHKKKP PDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

A0A6J1HWP6 Chlorophyll a-b binding protein, chloroplastic1.6e-12882.55Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MALSIS T LS+L I ESS S  +L+         F  K  P++ LR    H  AAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDPELL WFAQAEL+H RWAMLAVAGILLPEWFE+LGLI NFSW+DAG+REYFADPTTLLVAQ+ LMGWVEGRRWAD+VNPG VDVD KLPHKKKP PDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGGFWFDP+MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic4.8e-8255.64Show/hide
Query:  SSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHG
        SS SS    S + + +  F    +   +LR   +         ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE L W  QAEL+H 
Subjt:  SSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHG

Query:  RWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGS
        RWAML  AGI +PE    +G+++  SW+ AG +EYF D TTL + ++ L+GW EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDPL WG GS
Subjt:  RWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGS

Query:  PEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFS
        P  +  LRTKEIKNGRLAMLA +G  FQ IYTG GP++NL AH+ADPGH  IF+AFS
Subjt:  PEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFS

P13869 Chlorophyll a-b binding protein, chloroplastic2.0e-8357.2Show/hide
Query:  SSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHG
        SS SS    S + + +  F    +   +LR   F        V+       PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE L W AQAEL+H 
Subjt:  SSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHG

Query:  RWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGS
        RWAML  AGI +PE+   +G+++  SW+ AG +EYF D TTL V ++ L+GW EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDPL WG GS
Subjt:  RWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGS

Query:  PEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFS
        P  +  LRTKEIKNGRLAMLA +G  FQ IYTG GP++NL AH+ADPGH  IF+AFS
Subjt:  PEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFS

P27521 Chlorophyll a-b binding protein 4, chloroplastic4.3e-5451.74Show/hide
Query:  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGR
        W PG + P++L GSL GD GFDPLGL  DPE L WF QAEL++GRWAML VAG+LLPE F  +G+I+   W+DAG  +YFA  +TL V +  L  +VE R
Subjt:  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGR

Query:  RWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAF
        RW D+ NPGSV+ D        PK +VGYPGG  F+PL +      P    + KE+ NGRLAMLAF+G   Q   TG+GP ENL  H++DP H  I   F
Subjt:  RWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAF

Query:  S
        +
Subjt:  S

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic1.2e-10969.09Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MA +I+  + STL +      S+S   + +  R   +  S    +L  +      A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDP+ L WFAQAELIH RWAMLAV GI++PE  E LG I+NFSW+DAGSREYFAD TTL VAQM LMGW EGRRWADL+ PGSVD++ K PHK  PKPDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGG WFD +MWGRGSPEPVMVLRTKEIKNGRLAMLAF+G CFQA YT Q P+ENL AH+ADPGHCN+FSAF+S
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic8.3e-8264.08Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ L W  QAE++H RWAML  AGI +PE+   +G+++  SW+ AG +EYF D TTL V ++ L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMG

Query:  WVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDPL WG GSP  +  LRTKEIKNGRLAMLA +G  FQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAFS
        IF+AF+
Subjt:  IFSAFS

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 68.7e-11169.09Show/hide
Query:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
        MA +I+  + STL +      S+S   + +  R   +  S    +L  +      A   VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG
Subjt:  MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLG

Query:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV
        SDP+ L WFAQAELIH RWAMLAV GI++PE  E LG I+NFSW+DAGSREYFAD TTL VAQM LMGW EGRRWADL+ PGSVD++ K PHK  PKPDV
Subjt:  SDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDV

Query:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS
        GYPGG WFD +MWGRGSPEPVMVLRTKEIKNGRLAMLAF+G CFQA YT Q P+ENL AH+ADPGHCN+FSAF+S
Subjt:  GYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS

AT1G45474.1 photosystem I light harvesting complex gene 51.1e-4442.29Show/hide
Query:  KAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREY-
        KAA  G++     +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE L W+ QAEL+H R+AML VAGIL  +   T G+ +   W++AG+ ++ 
Subjt:  KAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREY-

Query:  FADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVD---FKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYT
        FA   TL+V Q  LMG+ E +R+ D V+PGS   +   F          + GYPGG   +PL   +   +     + KEIKNGRLAM+A +G   QA  T
Subjt:  FADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVD---FKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYT

Query:  GQGPLENLAAHVADPGHCNIFSAFSSS
          GP++NL  H+++P H  I     +S
Subjt:  GQGPLENLAAHVADPGHCNIFSAFSSS

AT1G45474.2 photosystem I light harvesting complex gene 51.1e-4442.29Show/hide
Query:  KAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREY-
        KAA  G++     +  +R  W PG +PP +LDG+L GD+GFDPLGLG DPE L W+ QAEL+H R+AML VAGIL  +   T G+ +   W++AG+ ++ 
Subjt:  KAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREY-

Query:  FADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVD---FKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYT
        FA   TL+V Q  LMG+ E +R+ D V+PGS   +   F          + GYPGG   +PL   +   +     + KEIKNGRLAM+A +G   QA  T
Subjt:  FADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVD---FKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYT

Query:  GQGPLENLAAHVADPGHCNIFSAFSSS
          GP++NL  H+++P H  I     +S
Subjt:  GQGPLENLAAHVADPGHCNIFSAFSSS

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A43.0e-5551.74Show/hide
Query:  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGR
        W PG + P++L GSL GD GFDPLGL  DPE L WF QAEL++GRWAML VAG+LLPE F  +G+I+   W+DAG  +YFA  +TL V +  L  +VE R
Subjt:  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGR

Query:  RWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAF
        RW D+ NPGSV+ D        PK +VGYPGG  F+PL +      P    + KE+ NGRLAMLAF+G   Q   TG+GP ENL  H++DP H  I   F
Subjt:  RWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAF

Query:  S
        +
Subjt:  S

AT3G61470.1 photosystem I light harvesting complex gene 25.9e-8364.08Show/hide
Query:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMG
        PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ L W  QAE++H RWAML  AGI +PE+   +G+++  SW+ AG +EYF D TTL V ++ L+G
Subjt:  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFAQAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMG

Query:  WVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCN
        W EGRRWAD++ PGSV+ D   P+ K    DVGYPGG WFDPL WG GSP  +  LRTKEIKNGRLAMLA +G  FQ IYTG GP++NL AH+ADPGH  
Subjt:  WVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCN

Query:  IFSAFS
        IF+AF+
Subjt:  IFSAFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTGTCCATTTCTCCGACTGTGCTCTCAACCCTCGGGATCGGAGAATCATCATCATCATCATCATCATTATCATCATCATTATCATCGTGGAGAGTCCGTTTTTC
GGTGAAATCAATCCCGGAACACAAGCTCCGGGGAGATTGTTTTCATCGGAAGGCGGCGAAATCGGGCGTGTCCAGTGTGTGTGAACCGCTCCCGCCCGACCGGCCCCTGT
GGTTCCCGGGCAGCAGCCCGCCCGAGTGGCTGGATGGAAGCCTTCCAGGGGATTTTGGCTTTGATCCGCTTGGATTGGGTTCGGACCCAGAGCTGCTAACATGGTTCGCA
CAAGCAGAGCTAATACACGGGAGATGGGCGATGCTAGCCGTGGCTGGAATCCTGCTACCCGAATGGTTCGAAACCTTAGGACTCATCGACAACTTCTCATGGTTCGACGC
GGGGTCGCGGGAGTATTTTGCGGACCCGACAACGCTGCTGGTGGCGCAGATGGCTCTCATGGGGTGGGTGGAGGGTCGACGCTGGGCCGACTTGGTGAACCCGGGCAGCG
TGGACGTGGACTTCAAACTGCCCCACAAGAAGAAGCCGAAGCCGGACGTGGGGTACCCGGGCGGGTTCTGGTTCGACCCCTTGATGTGGGGCAGGGGGTCGCCCGAGCCG
GTTATGGTGCTGCGGACCAAGGAGATCAAGAATGGGCGCTTGGCTATGCTGGCGTTTGTTGGACTGTGCTTTCAGGCTATTTATACAGGCCAAGGTCCGCTTGAGAACCT
GGCTGCCCACGTTGCAGATCCTGGCCACTGCAACATATTTTCGGCGTTTAGCTCGAGTTGA
mRNA sequenceShow/hide mRNA sequence
TCCTGATGTGGATATGGGTTAGAAAAAAAGGTGAAAACTTCAATAATATCCATAGCCAAACATGAGTGGCCATCTTATTCCCAATTCCATATCTCTCACAACCCATCTCC
AAGTTAAACCCACTTGCACCAAACTACCCTAAAACAATTCACAATTCCTTATCAGTTGTTCCAAATTAGGCCATGGCCCTGTCCATTTCTCCGACTGTGCTCTCAACCCT
CGGGATCGGAGAATCATCATCATCATCATCATCATTATCATCATCATTATCATCGTGGAGAGTCCGTTTTTCGGTGAAATCAATCCCGGAACACAAGCTCCGGGGAGATT
GTTTTCATCGGAAGGCGGCGAAATCGGGCGTGTCCAGTGTGTGTGAACCGCTCCCGCCCGACCGGCCCCTGTGGTTCCCGGGCAGCAGCCCGCCCGAGTGGCTGGATGGA
AGCCTTCCAGGGGATTTTGGCTTTGATCCGCTTGGATTGGGTTCGGACCCAGAGCTGCTAACATGGTTCGCACAAGCAGAGCTAATACACGGGAGATGGGCGATGCTAGC
CGTGGCTGGAATCCTGCTACCCGAATGGTTCGAAACCTTAGGACTCATCGACAACTTCTCATGGTTCGACGCGGGGTCGCGGGAGTATTTTGCGGACCCGACAACGCTGC
TGGTGGCGCAGATGGCTCTCATGGGGTGGGTGGAGGGTCGACGCTGGGCCGACTTGGTGAACCCGGGCAGCGTGGACGTGGACTTCAAACTGCCCCACAAGAAGAAGCCG
AAGCCGGACGTGGGGTACCCGGGCGGGTTCTGGTTCGACCCCTTGATGTGGGGCAGGGGGTCGCCCGAGCCGGTTATGGTGCTGCGGACCAAGGAGATCAAGAATGGGCG
CTTGGCTATGCTGGCGTTTGTTGGACTGTGCTTTCAGGCTATTTATACAGGCCAAGGTCCGCTTGAGAACCTGGCTGCCCACGTTGCAGATCCTGGCCACTGCAACATAT
TTTCGGCGTTTAGCTCGAGTTGAGTTGACAATCAAAACTTTGAGTTAGTGTGCGAAGAGTTCGAGCTCATATATAACAGCCAAGACACAACAAAATGCAAATAGAACGTA
CGTGAGAAGAATTTGTAATTGTGACTATTACAAATATTGAAATGTTTATTCATGTATACACTTTTTTACAGGGTGGTTGATCCTTTAATTAGAAGGTTGGGCACAAAATT
ACCACGATGCAACAAATAATGATAACTATTTTATTTTTAATTTTTTGTTTTTGAAATTTCAA
Protein sequenceShow/hide protein sequence
MALSISPTVLSTLGIGESSSSSSSLSSSLSSWRVRFSVKSIPEHKLRGDCFHRKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLTWFA
QAELIHGRWAMLAVAGILLPEWFETLGLIDNFSWFDAGSREYFADPTTLLVAQMALMGWVEGRRWADLVNPGSVDVDFKLPHKKKPKPDVGYPGGFWFDPLMWGRGSPEP
VMVLRTKEIKNGRLAMLAFVGLCFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSS