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Sed0004116 (gene) of Chayote v1 genome

Gene IDSed0004116
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:5085651..5087984
RNA-Seq ExpressionSed0004116
SyntenySed0004116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598857.1 hypothetical protein SDJN03_08635, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3661.94Show/hide
Query:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST
        MSGK L QW    QSY    D D DDYSY+PP Q  +Q  R  Y        VV  E  Q+S+YEQ+WR+HDRNR+TG+Y T S KEVAS G+TFKERS+
Subjt:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST

Query:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS---GGSGSKG
        GRVGSKDEFKTTSTYRVGD+SGY+EYQ QER+RRVDFG    SS+   G +GSKG
Subjt:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS---GGSGSKG

KAG7029798.1 hypothetical protein SDJN02_08141, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3662.18Show/hide
Query:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST
        MSGK L QW    QSY    D D DDYSY+PP Q  +Q  R  Y        VV  E  Q+S+YEQ+WR+HDRNR+TG+Y T S KEVAS G+TFKERS+
Subjt:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST

Query:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS---GGSGSKGG
        GRVGSKDEFKTTSTYRVGD+SGY+EYQ QER+RRVDFG    SS+   G +GSKGG
Subjt:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS---GGSGSKGG

XP_022157391.1 uncharacterized protein LOC111024099 [Momordica charantia]8.7e-4466.46Show/hide
Query:  MSGKHLHQWCRNQSYDYDSDSDSDDYSYNPPCQEV-IQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTG
        MSGK L QW  +Q YDY    DSDDYSY+PP Q   IQPR  YA       VV  E NQ S YE++WR HDR+R+TG Y+T S KEVAS G+TFKERSTG
Subjt:  MSGKHLHQWCRNQSYDYDSDSDSDDYSYNPPCQEV-IQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTG

Query:  RVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK
        RVG KDEFKTTST RVGD+SGY+EYQ QE YRRVDFG      S GSGSKGG SNYS+SKKYLK
Subjt:  RVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK

XP_022929740.1 uncharacterized protein LOC111436237 [Cucurbita moschata]3.3e-3562.76Show/hide
Query:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST
        MSGK L QW    QSY    D D DDYSY+PP Q  +Q  R  Y        VV  E  Q+S+YEQ+WR+HDRNR+TG+Y T S KEVAS G+TFKERS+
Subjt:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST

Query:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS
        GRVGSKDEFKTTSTYRVGD+SGY+EYQ QER+RRVDFG    SS+
Subjt:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS

XP_022997473.1 uncharacterized protein LOC111492379 [Cucurbita maxima]4.2e-3863.64Show/hide
Query:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST
        MSGK L QW    QSYDY    D DDYSY+PP Q  +Q  R  Y        VV  E  Q+S+YEQ+WR+HDRNR+TG+Y T S KEVAS G+TFKERS+
Subjt:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST

Query:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFG-GNNGSSSGGSGSKGG
        GRVGSKDEFKTTSTYRVGD+SGY+EYQ+QER+RRVDFG G++ S  G +GSKGG
Subjt:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFG-GNNGSSSGGSGSKGG

TrEMBL top hitse value%identityAlignment
A0A5A7VGP1 Uncharacterized protein5.1e-3462.25Show/hide
Query:  QSYDYDSDSDSDDYSYNPPCQEVIQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTGRVGSKDEFKTTST
        Q+YDYD    SDDYSYN   +  +Q    Y         V  + NQ+S+YEQ+WR+HDRNR+TG+Y T S K VAS G+TFKERSTGRVG+KDEFKTTST
Subjt:  QSYDYDSDSDSDDYSYNPPCQEVIQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTGRVGSKDEFKTTST

Query:  YRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK
        YRVGDKSGY+EYQ QER+RRVDFGG    SS GSGSKGG  N     KYLK
Subjt:  YRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK

A0A5D3CHW8 Uncharacterized protein3.0e-3462.25Show/hide
Query:  QSYDYDSDSDSDDYSYNPPCQEVIQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTGRVGSKDEFKTTST
        Q+YDYD    SDDYSYN   +  +Q    Y         V  + NQ+S+YEQ+WR+HDRNR+TG+Y T S K VAS G+TFKERSTGRVG+KDEFKTTST
Subjt:  QSYDYDSDSDSDDYSYNPPCQEVIQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTGRVGSKDEFKTTST

Query:  YRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK
        YRVGDKSGY+EYQ QER+RRVDFGG    SS GSGSKGG  N     KYLK
Subjt:  YRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK

A0A6J1DXX9 uncharacterized protein LOC1110240994.2e-4466.46Show/hide
Query:  MSGKHLHQWCRNQSYDYDSDSDSDDYSYNPPCQEV-IQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTG
        MSGK L QW  +Q YDY    DSDDYSY+PP Q   IQPR  YA       VV  E NQ S YE++WR HDR+R+TG Y+T S KEVAS G+TFKERSTG
Subjt:  MSGKHLHQWCRNQSYDYDSDSDSDDYSYNPPCQEV-IQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTG

Query:  RVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK
        RVG KDEFKTTST RVGD+SGY+EYQ QE YRRVDFG      S GSGSKGG SNYS+SKKYLK
Subjt:  RVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK

A0A6J1EV61 uncharacterized protein LOC1114362371.6e-3562.76Show/hide
Query:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST
        MSGK L QW    QSY    D D DDYSY+PP Q  +Q  R  Y        VV  E  Q+S+YEQ+WR+HDRNR+TG+Y T S KEVAS G+TFKERS+
Subjt:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST

Query:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS
        GRVGSKDEFKTTSTYRVGD+SGY+EYQ QER+RRVDFG    SS+
Subjt:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFGGNNGSSS

A0A6J1KE05 uncharacterized protein LOC1114923792.0e-3863.64Show/hide
Query:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST
        MSGK L QW    QSYDY    D DDYSY+PP Q  +Q  R  Y        VV  E  Q+S+YEQ+WR+HDRNR+TG+Y T S KEVAS G+TFKERS+
Subjt:  MSGKHLHQWCRN-QSYDYDSDSDSDDYSYNPPCQEVIQ-PRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERST

Query:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFG-GNNGSSSGGSGSKGG
        GRVGSKDEFKTTSTYRVGD+SGY+EYQ+QER+RRVDFG G++ S  G +GSKGG
Subjt:  GRVGSKDEFKTTSTYRVGDKSGYSEYQYQERYRRVDFG-GNNGSSSGGSGSKGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGAAAGCACCTTCATCAATGGTGCCGCAACCAAAGTTATGATTATGACAGTGATAGCGATAGCGATGACTATTCATACAATCCTCCATGTCAAGAAGTAATTCA
GCCAAGAACTGCATATGCGGTTTCTGCAAATGCACCTCCAGTTGTTCGTGTAGAAGGCAACCAGATCAGTAACTACGAACAGACTTGGAGGAGTCATGATCGTAACAGGA
AAACCGGAACGTATAGGACCCAATCAATGAAGGAGGTTGCTTCTCATGGTGATACTTTTAAAGAGAGGTCAACTGGCAGAGTTGGCTCCAAAGATGAGTTCAAAACTACC
TCCACCTACAGGGTCGGCGACAAAAGTGGATATTCTGAGTATCAGTATCAGGAGAGGTACCGTCGAGTTGATTTTGGCGGTAACAATGGTAGCAGCAGCGGCGGATCCGG
AAGTAAGGGAGGATACAGCAACTATTCAACTTCCAAAAAGTATCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
GTCAAAAAATCTAACTCCTTTCCGGGTTTTCTTTCTTCTTCTCTCTTCAACACCAAAATCCAAACACCCCCGGTGTAAGTAGTACTAAAAGCAGGCGATTACATTCACCT
GGCTATATATACCCTACGTGGACCCTGATTCAAAACCCTAACCCTCCATTTTTTTCTCAGAGGCAGCCGAAAGGAAATCGCAGCAATGTCAGGAAAGCACCTTCATCAAT
GGTGCCGCAACCAAAGTTATGATTATGACAGTGATAGCGATAGCGATGACTATTCATACAATCCTCCATGTCAAGAAGTAATTCAGCCAAGAACTGCATATGCGGTTTCT
GCAAATGCACCTCCAGTTGTTCGTGTAGAAGGCAACCAGATCAGTAACTACGAACAGACTTGGAGGAGTCATGATCGTAACAGGAAAACCGGAACGTATAGGACCCAATC
AATGAAGGAGGTTGCTTCTCATGGTGATACTTTTAAAGAGAGGTCAACTGGCAGAGTTGGCTCCAAAGATGAGTTCAAAACTACCTCCACCTACAGGGTCGGCGACAAAA
GTGGATATTCTGAGTATCAGTATCAGGAGAGGTACCGTCGAGTTGATTTTGGCGGTAACAATGGTAGCAGCAGCGGCGGATCCGGAAGTAAGGGAGGATACAGCAACTAT
TCAACTTCCAAAAAGTATCTCAAATGAAGAGTTGCTTTGTAAGTAAATGCTAGCATGTTTGGCTCTCTAGTTTTGAACTTGGTTTTTCTGTTCGTTGCATACTTTGGTTT
TGTTATGTTGTTCTGTGATGTCTGAACTTCTGGCATTTTCCTTTTGTTAGATTTTAAGAGACCCGTTTGTTTTTTTGGTGTCTGTAAATGCTCGTGGAAGTATACAATAT
ACAAAGTATGGATGCTTGTAATTACTTTTGAAATAAGTGAAGCTTAATGCTTGGTTTATATGTTCAAATAGGTGATAAATTATTCTGGG
Protein sequenceShow/hide protein sequence
MSGKHLHQWCRNQSYDYDSDSDSDDYSYNPPCQEVIQPRTAYAVSANAPPVVRVEGNQISNYEQTWRSHDRNRKTGTYRTQSMKEVASHGDTFKERSTGRVGSKDEFKTT
STYRVGDKSGYSEYQYQERYRRVDFGGNNGSSSGGSGSKGGYSNYSTSKKYLK