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Sed0004137 (gene) of Chayote v1 genome

Gene IDSed0004137
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:38385889..38386721
RNA-Seq ExpressionSed0004137
SyntenySed0004137
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032826.1 hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa]2.6e-0740.87Show/hide
Query:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSE-FLMESEIGGMLL--GSYNTLPVVPKTGTPSR---PICERPVDPYKDCLGEGR
        + ++IL LLL+   +   VNDT ASA C+ SH +KC LVR+ +A  +  +ME E+G MLL    Y T    P+TGT ++     C RP   Y  CLGE R
Subjt:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSE-FLMESEIGGMLL--GSYNTLPVVPKTGTPSR---PICERPVDPYKDCLGEGR

Query:  PNAQAQNCDPYFRGP
             + C  Y R P
Subjt:  PNAQAQNCDPYFRGP
KGN57776.1 hypothetical protein Csa_010194 [Cucumis sativus]1.4e-0841.44Show/hide
Query:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSEFLMESEIGGMLLGSYNTLPVVPKTGTPSRPI---CERPVDPYKDCLGEGRPNA
        + ++ILLLLL+ S  +  VNDTAASA C+ SH +KC LVR+ +   EF+MESE+G ML  +Y+     P      + +   C RP   Y+ CLG  R   
Subjt:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSEFLMESEIGGMLLGSYNTLPVVPKTGTPSRPI---CERPVDPYKDCLGEGRPNA

Query:  QAQNCDPYFRG
          + C  Y RG
Subjt:  QAQNCDPYFRG
TrEMBL top hitse value%identityAlignment
A0A0A0LCI8 Uncharacterized protein6.7e-0941.44Show/hide
Query:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSEFLMESEIGGMLLGSYNTLPVVPKTGTPSRPI---CERPVDPYKDCLGEGRPNA
        + ++ILLLLL+ S  +  VNDTAASA C+ SH +KC LVR+ +   EF+MESE+G ML  +Y+     P      + +   C RP   Y+ CLG  R   
Subjt:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSEFLMESEIGGMLLGSYNTLPVVPKTGTPSRPI---CERPVDPYKDCLGEGRPNA

Query:  QAQNCDPYFRG
          + C  Y RG
Subjt:  QAQNCDPYFRG
A0A5D3E3B8 Uncharacterized protein1.3e-0740.87Show/hide
Query:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSE-FLMESEIGGMLL--GSYNTLPVVPKTGTPSR---PICERPVDPYKDCLGEGR
        + ++IL LLL+   +   VNDT ASA C+ SH +KC LVR+ +A  +  +ME E+G MLL    Y T    P+TGT ++     C RP   Y  CLGE R
Subjt:  MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSE-FLMESEIGGMLL--GSYNTLPVVPKTGTPSR---PICERPVDPYKDCLGEGR

Query:  PNAQAQNCDPYFRGP
             + C  Y R P
Subjt:  PNAQAQNCDPYFRGP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCCTCATTCTTCTTCTACTCCTCCTCACCAGCTCTACTTCCAACGCCGTCAACGACACTGCTGCATCAGCCTTTTGCGACCGCAGCCACCCGGAGAAATGCCG
CCTCGTTCGAGAAGCGATCGCAAGTTCCGAATTCTTGATGGAATCGGAGATCGGAGGGATGCTGTTAGGTTCCTACAATACTTTACCAGTAGTTCCCAAAACCGGAACAC
CTAGCAGACCGATCTGTGAGCGTCCGGTAGACCCGTACAAAGACTGTCTCGGCGAGGGGAGACCAAACGCGCAGGCACAAAACTGCGACCCTTACTTTCGAGGACCAGGT
TGTTCATGA
mRNA sequenceShow/hide mRNA sequence
AAATAATCATTCCTCCTTAATCATTACCATTCTCCTTGCCTCAAGCATCCAACTTTCCGAACCACCCAAAATTCGATATCTTTTTATTAAACTTCCATCTTTCACTCTTC
AACATACTTCACTGCACTATCTTGCCTTCAACCATGGCCTCCCTCATTCTTCTTCTACTCCTCCTCACCAGCTCTACTTCCAACGCCGTCAACGACACTGCTGCATCAGC
CTTTTGCGACCGCAGCCACCCGGAGAAATGCCGCCTCGTTCGAGAAGCGATCGCAAGTTCCGAATTCTTGATGGAATCGGAGATCGGAGGGATGCTGTTAGGTTCCTACA
ATACTTTACCAGTAGTTCCCAAAACCGGAACACCTAGCAGACCGATCTGTGAGCGTCCGGTAGACCCGTACAAAGACTGTCTCGGCGAGGGGAGACCAAACGCGCAGGCA
CAAAACTGCGACCCTTACTTTCGAGGACCAGGTTGTTCATGAAAATGAAATAAAGAAGAGGAAGATGTATTTGTCGCTGTGATTTATGGGTGTTGTTCATCGGCTTATGA
ACGCTAATTAACACTAATGTGGTTATTTTGTTGAAGGAAGATGGATTTGTTCGTTGCTTGTTGTTTGTTGTTGTTAATGGATGCAATATGGTAATGTTCTGTGTATTCAT
TTACTAAATCAAACCTCTATTCTCTATTTCTGCTTTTGTTCGTTAATTTAATGGGTTCTTATGTTTGTAGTAATTATCTCAACGGTTATCTCAACGGTTAAAAGATAATT
TATCGTACACAAAACAACAATAATTTTTTTAATAAATATATACTTATCAAAATGAGTCTTTCA
Protein sequenceShow/hide protein sequence
MASLILLLLLLTSSTSNAVNDTAASAFCDRSHPEKCRLVREAIASSEFLMESEIGGMLLGSYNTLPVVPKTGTPSRPICERPVDPYKDCLGEGRPNAQAQNCDPYFRGPG
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