; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004148 (gene) of Chayote v1 genome

Gene IDSed0004148
OrganismSechium edule (Chayote v1)
DescriptionExopolygalacturonase-like
Genome locationLG06:2599134..2600681
RNA-Seq ExpressionSed0004148
SyntenySed0004148
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045593.1 exopolygalacturonase-like [Cucumis melo var. makuwa]3.3e-10252.13Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +L  LLL  S +KAQ SG +FDITKYGAK N  +T AL SAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

KAA0045594.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.8e-10352.63Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +L  LLL  S +KAQ SGG+FDITKYGAK N  +T ALASAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

KAA0045608.1 exopolygalacturonase-like [Cucumis melo var. makuwa]2.3e-10352.63Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +L  LLL  S +KAQ SGG+FDITKYGAK N  +T ALASAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

KAA0045610.1 exopolygalacturonase-like [Cucumis melo var. makuwa]3.3e-10252.13Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +LH LLL  S  KAQ SG + DITK+GAK N  +T ALASAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

XP_038895545.1 exopolygalacturonase-like [Benincasa hispida]1.1e-10051.86Show/hide
Query:  MRSRSNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAK
        M  RSNFL ++  LLL  S AK+Q S GIFD+T +GAK N  IT ALA AW+ ACAST+PSKVL+PK  YKLSQSNL GPC++SIEFQ+EGTLQAP + K
Subjt:  MRSRSNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAK

Query:  GDGLISFNQIDQFTLSGTGVFDGQGKS-------------------------------------------------------------------------
        GDGL+    +DQ T+SGTGV DGQGK+                                                                         
Subjt:  GDGLISFNQIDQFTLSGTGVFDGQGKS-------------------------------------------------------------------------

Query:  -------------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVS
                                              HG SIGSLG YS E++V+ VTVKKCKLI+T+NGV IKTWPDSVG + A D+HFEDIEMVNVS
Subjt:  -------------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVS

Query:  NPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINH
        NPIIIDQE+CP NQCNRKV SKIKIS ++FKNI+GTSATP+AVKLVCSKS PCEGVEVADIDL+Y+G+QG ITSQCAN+ P +SGKQNP IC+EP PI+ 
Subjt:  NPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINH

Query:  VSS
         S+
Subjt:  VSS

TrEMBL top hitse value%identityAlignment
A0A1S3BML3 LOW QUALITY PROTEIN: exopolygalacturonase-like6.7e-10151.13Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +L  LLL  S +KAQ + G+FDITKYGAK N  IT ALASAW+EACAST+PSKVL+PKG Y L+QSNLKGPC++SIE Q+EGT+QA ++ KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKSR----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKSR----------------------------------------------------------------------------

Query:  ----------------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG Y+ E+ +  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP++
Subjt:  ----------------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKIS ++FKNIRGTSATP+AVKLVCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC+EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

A0A5A7TR51 Exopolygalacturonase-like8.5e-10452.63Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +L  LLL  S +KAQ SGG+FDITKYGAK N  +T ALASAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

A0A5A7TRZ0 Exopolygalacturonase-like1.1e-10352.63Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +L  LLL  S +KAQ SGG+FDITKYGAK N  +T ALASAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

A0A5D3BWP4 Exopolygalacturonase-like1.6e-10252.13Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +LH LLL  S  KAQ SG + DITK+GAK N  +T ALASAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

A0A5D3DYI3 Exopolygalacturonase-like1.6e-10252.13Show/hide
Query:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL
        SNF+ +L  LLL  S +KAQ SG +FDITKYGAK N  +T AL SAW+EACAST+PSKVL+PKG Y LSQSNLKGPC+++IE Q+EGTLQAP + KGDGL
Subjt:  SNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGL

Query:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------
        +    +DQ T+SGTGV DGQGK+                                                                             
Subjt:  ISFNQIDQFTLSGTGVFDGQGKS-----------------------------------------------------------------------------

Query:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII
                                          HG SIGSLG YS E+ V  VTVKKCKL  TTNGV IKTWPDS   + ASD+HFEDIEMVNVSNP+I
Subjt:  ---------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPII

Query:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS
        IDQE+CP NQCNRKV SKIKISN++FKNIRGTSATP+AVK+VCS+S PCEGVEVADIDLTY+G++G I SQCAN+KP ISGKQNPPIC EP P    SS
Subjt:  IDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSS

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)1.5e-6040.56Show/hide
Query:  TMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIE---AKGDGLISFNQIDQFTLSGTGVFDGQGKSR------------
        T AL +AW+EACAS SPS +LVPKG + +    L+GPC++SI  Q++GTL+AP +    KG G I+ N+ID  T+ G GVFDGQGKS             
Subjt:  TMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIE---AKGDGLISFNQIDQFTLSGTGVFDGQGKSR------------

Query:  ---------------------------------------------------------------------------------------------------H
                                                                                                           H
Subjt:  ---------------------------------------------------------------------------------------------------H

Query:  GFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDS-VGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSA
        G S+GSLG Y  EESV  + VK C +  + NGV IKTWP S  GE  AS++HF+DI M +V  PI+IDQ +CP NQC  +V S +K+S I+FKNI+GTS 
Subjt:  GFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDS-VGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSA

Query:  TPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS
        T  AVKLVCSKS PC GVE+ADIDLTY+G  G  TS C NIKPTI GKQ P ICS
Subjt:  TPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS

Q05967 Polygalacturonase3.9e-6135.16Show/hide
Query:  LHFLLLFASIAK-AQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLIS
        +HF L+   +A   +   G+FDITKYGA +N  I+ AL +A++EAC STSPS +++PKG + ++Q  L+GPC++ +E Q++ TL+A   P + K    ++
Subjt:  LHFLLLFASIAK-AQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLIS

Query:  FNQIDQFTLSGTGVFDGQGKSR------------------------------------------------------------------------------
         N++DQFT+SG G+ DGQ  +                                                                               
Subjt:  FNQIDQFTLSGTGVFDGQGKSR------------------------------------------------------------------------------

Query:  -----------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEF
                                     HG S+GSLG    E+ V  V V+ C   +T NGV IKTWP S    + +D+HFEDI + NVSNP++IDQ +
Subjt:  -----------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEF

Query:  CPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS
        CP N+CN+ + S++KIS ++F+NI+GTS T  AV L+ SK  PCEG+EV DID+TY+G +G   S C NIKP++ GKQNPP+C+
Subjt:  CPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS

Q39766 Polygalacturonase1.6e-5935.89Show/hide
Query:  MRSRSNFLPILH-FLLLFASIAKAQPSGGIFD-ITKYGAKTN--DIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAP
        M    N +P +   LLLF S +K QP    FD + K+GAK +    ++     AW+EACAS +PS V++PKG Y LS+ NL+GPC+  IE  V+GT+QAP
Subjt:  MRSRSNFLPILH-FLLLFASIAKAQPSGGIFD-ITKYGAKTN--DIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAP

Query:  IEA---KGDGLISFNQIDQFTLSGTGVFDGQ---------------------------------------------------------------------
         +    K    + F  ++ F + G G+FDGQ                                                                     
Subjt:  IEA---KGDGLISFNQIDQFTLSGTGVFDGQ---------------------------------------------------------------------

Query:  ------GKSR-----------------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFED
              GKS                                    HG SIGSLG +  EE V+ + +  C + +T+NG  IKTWP   G    S++HFED
Subjt:  ------GKSR-----------------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFED

Query:  IEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS
        I M NVS+PI+IDQ++CP N+C +   SK+K+SNI+FKNIRGTSA P A+K +CS S+PC+ VE+ADID+ +NG + + TSQC N+KP   GK NP  CS
Subjt:  IEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS

Query:  EPVP
         PVP
Subjt:  EPVP

Q39786 Polygalacturonase2.8e-5935.89Show/hide
Query:  MRSRSNFLPILH-FLLLFASIAKAQPSGGIFD-ITKYGAKTN--DIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAP
        M    N +P +   LLLF S +K Q     FD + K+GAK +    ++     AW+EACAS +PS V++PKG Y LS+ NL+GPC+  IE  V+GT+QAP
Subjt:  MRSRSNFLPILH-FLLLFASIAKAQPSGGIFD-ITKYGAKTN--DIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAP

Query:  IEA---KGDGLISFNQIDQFTLSGTGVFDGQ---------------------------------------------------------------------
         +    K    + F  ++ F + G G+FDGQ                                                                     
Subjt:  IEA---KGDGLISFNQIDQFTLSGTGVFDGQ---------------------------------------------------------------------

Query:  ------GKSR-----------------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFED
              GKS                                    HG SIGSLG +  EE V+ + +  C + +T+NG  IKTWP   G    S++HFED
Subjt:  ------GKSR-----------------------------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFED

Query:  IEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS
        I M NVS+PI+IDQ++CP N+C +   SK+K+SNI+FKNIRGTSA P A+K +CS S+PC+ VE+ADID+ +NG + + TSQC N+KP  SGK NP  CS
Subjt:  IEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICS

Query:  EPVP
         PVP
Subjt:  EPVP

Q40312 Polygalacturonase8.6e-6136.04Show/hide
Query:  ILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIE---AKG-DGLI
        I+   L  A    AQ   G+ DI+K+G K N  I  AL SAW EACAST+ +K+++P G Y+L+   LKGPC+  IE QV+GT+QAP +    KG +   
Subjt:  ILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIE---AKG-DGLI

Query:  SFNQIDQFTLSGTGVFDGQGKS------------------------------------------------------------------------------
         F  +D  TLSG GVFDGQG +                                                                              
Subjt:  SFNQIDQFTLSGTGVFDGQGKS------------------------------------------------------------------------------

Query:  ------------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSN
                                             HG S+GSLG ++TEE+V+ +TVK C L +T NGV IKTWPD+ G    SD+HFEDI M NV N
Subjt:  ------------------------------------RHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSN

Query:  PIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEP
        P+IIDQE+ P NQC++K  SKIK+S I+FKN++GTS T   V L+CS + PC+GVE+ ++DL +NG     T++C N+KP ++G    P+C  P
Subjt:  PIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEP

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein7.2e-5534.24Show/hide
Query:  DITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLISFNQIDQFTLSGTGVFDGQGKS
        ++   G+ +   IT AL  A+  AC S+SPSKV++PKG +KL +  ++GPC+  IE  ++GT++A    I+ K +  + F  ID F L+G G FDG+G +
Subjt:  DITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLISFNQIDQFTLSGTGVFDGQGKS

Query:  R---------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  R---------------------------------------------------------------------------------------------------

Query:  -----------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISN
                   HG S+GSLG Y  E+ V  + V  C L  T NG+ IKTWP +     ASD+HFEDI + +VSNPI+IDQE+CP NQCN++ +S IK+ N
Subjt:  -----------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISN

Query:  ITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEP
        I+FKNIRGTS    AVKL+CSK  PC+ VE+ DID+ YNG  G  T  C+N+ P I G Q+P  CS P
Subjt:  ITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEP

AT3G07830.1 Pectin lyase-like superfamily protein1.7e-4831.37Show/hide
Query:  SGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLISFNQIDQFTLSGTGVFD
        S    ++ +  +     IT AL  A+  AC S +P KV++PKG +KL +  + GPC++ +E  + GT+ A    I  K +  + F ++D F L+G G FD
Subjt:  SGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLISFNQIDQFTLSGTGVFD

Query:  GQGKSR----------------------------------------------------------------------------------------------
        G+G +                                                                                               
Subjt:  GQGKSR----------------------------------------------------------------------------------------------

Query:  ----------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSK
                        HG S+GSLG Y  E+ V  + V  C L  T NG+ IKTWP +     AS++HFE+I + NVSNPI+IDQE+CP NQCN++ SS 
Subjt:  ----------------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSK

Query:  IKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEP
        IK++NI+F+ IRGTS    AVKL+CSK  PCE V+V DI++ Y G  G  T  C+N++P + G Q P  C+ P
Subjt:  IKISNITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEP

AT3G07840.1 Pectin lyase-like superfamily protein1.5e-4732.08Show/hide
Query:  DITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLISFNQIDQFTLSGTGVFDGQGKS
        ++   G      IT AL  A+  AC + + SKV++ KG +KL +  + GPC+  +E  ++GTL+A    I+ K +  + F +I+ F L+G G+FDG+G +
Subjt:  DITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQA---PIEAKGDGLISFNQIDQFTLSGTGVFDGQGKS

Query:  R---------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  R---------------------------------------------------------------------------------------------------

Query:  -----------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISN
                   HG S+GSLG Y  E+ V  +TV  C L  T NG+ IKTWP +     AS +HFE+I + NVSNPI+IDQE+CP NQCN++  S IK+ +
Subjt:  -----------HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISN

Query:  ITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSE-PVP
        I+FKNIRGTS    AVKL+CSK+ PC  VE+ +I+L Y G  G  T  C+N+ P + G QNP  CS  P P
Subjt:  ITFKNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSE-PVP

AT3G14040.1 Pectin lyase-like superfamily protein1.5e-4455.13Show/hide
Query:  HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSA
        HG SIGSLG Y  E+ VK VTV+KC + +T NGV IKTWP S    +AS++ FEDI M NVS P++IDQE+CP   C   V SK+K+S++T KNI+GTSA
Subjt:  HGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSA

Query:  TPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSE
        T +AVKL+CSK  PC  + ++DI+L +NG +G   S C+NIKP +SGK  P  C+E
Subjt:  TPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSE

AT5G48140.1 Pectin lyase-like superfamily protein4.8e-5134.37Show/hide
Query:  ITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKG-DGLISFNQIDQFTLSGTGVFDGQGKSR-------------
        IT AL  A+ EAC   + S V++PKG YKL +  + GPC+  I   + GT++A   A G +  ++F  I+ F L+G GVFDG+G +              
Subjt:  ITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKG-DGLISFNQIDQFTLSGTGVFDGQGKSR-------------

Query:  -------------------------------------------------------------------------------------------------HGF
                                                                                                         HG 
Subjt:  -------------------------------------------------------------------------------------------------HGF

Query:  SIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPI
        SIGSLG YS EE+V  + +  C L  T NG+ IKTWP +     ASD+HFE+I + NVSNPI+IDQE+CP NQCN++  S IK++NI+FK IRGTS    
Subjt:  SIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITFKNIRGTSATPI

Query:  AVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPV
        AVKL+CSK  PC+ VEV D+++ Y G  G  T QC+N+ P + G Q P  CS PV
Subjt:  AVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCGAGATCAAACTTTTTGCCAATACTACATTTCTTATTATTGTTTGCATCTATTGCTAAAGCTCAACCAAGTGGTGGTATTTTCGATATTACTAAGTATGGTGC
CAAAACTAATGATATTATTACTATGGCTTTAGCAAGTGCATGGAGAGAAGCATGTGCATCGACCAGTCCTAGTAAAGTGTTGGTTCCAAAAGGAGTTTATAAATTAAGTC
AGTCAAATCTTAAAGGTCCTTGTGAAAATTCTATTGAGTTTCAAGTTGAAGGAACATTACAAGCTCCAATCGAGGCGAAAGGAGATGGATTGATCAGTTTCAATCAAATC
GATCAATTTACATTATCAGGTACTGGAGTTTTTGATGGCCAAGGAAAATCGAGACATGGCTTTTCCATAGGAAGCTTGGGACTGTATAGTACTGAAGAATCCGTGAAAGA
GGTTACAGTGAAAAAATGCAAACTAATCAGTACTACAAATGGTGTTCATATTAAAACATGGCCAGACTCTGTTGGTGAATACTTAGCCTCTGACTTGCATTTTGAAGATA
TTGAAATGGTTAATGTGAGCAATCCTATTATTATAGATCAAGAATTTTGTCCATTGAATCAATGCAACCGAAAGGTTTCATCAAAAATTAAGATTAGTAATATCACATTC
AAGAATATTAGAGGTACTTCTGCTACACCAATTGCTGTCAAGCTAGTTTGCAGTAAAAGTACACCATGTGAAGGTGTTGAAGTAGCTGATATTGATCTCACTTATAATGG
AAATCAAGGATCGATTACGTCACAGTGTGCGAATATCAAGCCCACCATTTCTGGAAAGCAAAACCCTCCCATATGTAGTGAACCTGTTCCTATCAATCATGTTTCATCAA
CAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCGAGATCAAACTTTTTGCCAATACTACATTTCTTATTATTGTTTGCATCTATTGCTAAAGCTCAACCAAGTGGTGGTATTTTCGATATTACTAAGTATGGTGC
CAAAACTAATGATATTATTACTATGGCTTTAGCAAGTGCATGGAGAGAAGCATGTGCATCGACCAGTCCTAGTAAAGTGTTGGTTCCAAAAGGAGTTTATAAATTAAGTC
AGTCAAATCTTAAAGGTCCTTGTGAAAATTCTATTGAGTTTCAAGTTGAAGGAACATTACAAGCTCCAATCGAGGCGAAAGGAGATGGATTGATCAGTTTCAATCAAATC
GATCAATTTACATTATCAGGTACTGGAGTTTTTGATGGCCAAGGAAAATCGAGACATGGCTTTTCCATAGGAAGCTTGGGACTGTATAGTACTGAAGAATCCGTGAAAGA
GGTTACAGTGAAAAAATGCAAACTAATCAGTACTACAAATGGTGTTCATATTAAAACATGGCCAGACTCTGTTGGTGAATACTTAGCCTCTGACTTGCATTTTGAAGATA
TTGAAATGGTTAATGTGAGCAATCCTATTATTATAGATCAAGAATTTTGTCCATTGAATCAATGCAACCGAAAGGTTTCATCAAAAATTAAGATTAGTAATATCACATTC
AAGAATATTAGAGGTACTTCTGCTACACCAATTGCTGTCAAGCTAGTTTGCAGTAAAAGTACACCATGTGAAGGTGTTGAAGTAGCTGATATTGATCTCACTTATAATGG
AAATCAAGGATCGATTACGTCACAGTGTGCGAATATCAAGCCCACCATTTCTGGAAAGCAAAACCCTCCCATATGTAGTGAACCTGTTCCTATCAATCATGTTTCATCAA
CAGGTTAA
Protein sequenceShow/hide protein sequence
MRSRSNFLPILHFLLLFASIAKAQPSGGIFDITKYGAKTNDIITMALASAWREACASTSPSKVLVPKGVYKLSQSNLKGPCENSIEFQVEGTLQAPIEAKGDGLISFNQI
DQFTLSGTGVFDGQGKSRHGFSIGSLGLYSTEESVKEVTVKKCKLISTTNGVHIKTWPDSVGEYLASDLHFEDIEMVNVSNPIIIDQEFCPLNQCNRKVSSKIKISNITF
KNIRGTSATPIAVKLVCSKSTPCEGVEVADIDLTYNGNQGSITSQCANIKPTISGKQNPPICSEPVPINHVSSTG