; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004160 (gene) of Chayote v1 genome

Gene IDSed0004160
OrganismSechium edule (Chayote v1)
DescriptionRAB6-interacting golgin
Genome locationLG02:43148780..43151086
RNA-Seq ExpressionSed0004160
SyntenySed0004160
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137876.1 GRB10-interacting GYF protein 2 [Cucumis sativus]1.8e-7397.59Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA IREELEALADPMRKEVAQVRK+IDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

XP_008442808.1 PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]8.3e-7498.19Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA IREELEALADPMRKEVAQVRKRIDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

XP_022144720.1 uncharacterized protein LOC111014340 [Momordica charantia]1.8e-6894.41Show/hide
Query:  QSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKEL
        Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLA IREELEALADPMRKEVAQVRK+IDAVNKEL
Subjt:  QSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKEL

Query:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        KPLGHTCQKKEKEYK+AL+AFN+KNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

XP_022945279.1 uncharacterized protein LOC111449572 [Cucurbita moschata]7.7e-7295.78Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLA IREELEALADPMRKEVAQVRKRIDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

XP_038903091.1 GRB10-interacting GYF protein 2-like [Benincasa hispida]1.6e-7296.99Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        Q EQAQ QQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA IREELEALADPMRKEVAQVRK+IDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

TrEMBL top hitse value%identityAlignment
A0A0A0LGI7 RAB6-interacting golgin8.9e-7497.59Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA IREELEALADPMRKEVAQVRK+IDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

A0A1S3B6L6 RAB6-interacting golgin4.0e-7498.19Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA IREELEALADPMRKEVAQVRKRIDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

A0A5D3DPH8 RAB6-interacting golgin4.0e-7498.19Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLA IREELEALADPMRKEVAQVRKRIDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

A0A6J1G0J9 RAB6-interacting golgin3.7e-7295.78Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLA IREELEALADPMRKEVAQVRKRIDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

A0A6J1KYK3 RAB6-interacting golgin3.7e-7295.78Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QPEQAQ QQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLA IREELEALADPMRKEVAQVRKRIDA
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR
        VNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELV ESERLRLKKLEELSKNIDTIR
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR

SwissProt top hitse value%identityAlignment
B1H222 RAB6-interacting golgin7.2e-0430.33Show/hide
Query:  RAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLM
        R  EE+ +RKK  + + +  +  R + ET +L  I++EL+AL D +  ++  +R RID  + E         + E EY  A      K + K QL   L 
Subjt:  RAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLM

Query:  ELVGESERLRLKKLEELSKNID
         ++ ++E  + +KLEEL + +D
Subjt:  ELVGESERLRLKKLEELSKNID

Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)1.1e-5571.43Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QP+    QQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL++IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVGESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLME   LVGESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLME---LVGESERLRLKKLEELSKNIDTI

AT2G36410.2 Family of unknown function (DUF662)2.6e-5772.73Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QP+    QQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL++IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLMELVGESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTI

AT2G36410.3 Family of unknown function (DUF662)3.7e-5672.12Show/hide
Query:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA
        QP+    QQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++QAQLGRVE+ETKRL++IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKK  EYKEAL+ FN+KN+EKVQLITKLMELVGESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTI

AT3G09980.1 Family of unknown function (DUF662)8.6e-6183.89Show/hide
Query:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKE
        +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA IREELE LADPMRKEVA VRK+ID+VNKELKPLGHT QKKE
Subjt:  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKE

Query:  KEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTI
        +EYKEALEAFN+KN+EKVQLIT+LMELVGESE++R+KKLEELSKNID+I
Subjt:  KEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTI

AT3G52920.2 Family of unknown function (DUF662)1.1e-5576.73Show/hide
Query:  QSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKEL
        Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGRVEEET+RLASIREELE +ADPMRKEV  VRK+ID+VNKEL
Subjt:  QSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKEL

Query:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDT
        KPLG T QKKE+EYKEAL+ FN+KN+EKVQLITKLMELVGESE+LRLKKL+ELS++IDT
Subjt:  KPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGCCAGAACAAGCTCAATCGCAGCAGCAATTAATGGTTCAGAACAACACCGGCAGCTTAAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATTTCCAG
GTCTGCTCTCTCCACTTTCAGAGCCAAAGAAGAAGAGATCGAGAGGAAGAAGATGGAGGTTAGAGAAAAGGTTCAAGCCCAGTTGGGCAGAGTCGAAGAAGAAACCAAAC
GCCTCGCTTCTATCCGTGAGGAACTCGAGGCGCTTGCAGATCCAATGAGGAAGGAGGTGGCGCAGGTTCGGAAAAGGATCGACGCGGTAAACAAGGAATTAAAGCCTCTG
GGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACAAAATTAATGGAGCTCGTGGG
TGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACAATTCGGTAA
mRNA sequenceShow/hide mRNA sequence
AAATAATGCTGGTTGAAAAAAGTGAAGAGGAGGGGGAGGCTAAGGTGGCTTGGCACTTTCAAATAAGCACTTCCAATATCCACAGTAAAAAAAAAAAAAGAAAAAAGAAA
TAGAAATAGAAAAATACAGCACAAACCCCATCATTTCAAAAGCAAAAGCAAAAGAAATAGAGAGAGAGAGAAGAGAAAGCAACAAACCCAGAAATAAAGGAAGAAGAAGA
GAGAAATTGAAGCAAAAATTGGAAGAACAAGAACAAGGGTTTTGTGTTGTTGTTGTTGAAGAAGAAGAAGAAGATGCAGCAGCCAGAACAAGCTCAATCGCAGCAGCAAT
TAATGGTTCAGAACAACACCGGCAGCTTAAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATTTCCAGGTCTGCTCTCTCCACTTTCAGAGCCAAAGAAGAAGAG
ATCGAGAGGAAGAAGATGGAGGTTAGAGAAAAGGTTCAAGCCCAGTTGGGCAGAGTCGAAGAAGAAACCAAACGCCTCGCTTCTATCCGTGAGGAACTCGAGGCGCTTGC
AGATCCAATGAGGAAGGAGGTGGCGCAGGTTCGGAAAAGGATCGACGCGGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGG
AAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACAAAATTAATGGAGCTCGTGGGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAG
CTGAGTAAGAACATAGATACAATTCGGTAAATGAATTGCGATAGGCGGAATCGAGATAGATTGATTGATTGATTGCAGCGACGGATGACAAAGTGATAACCCCCTGTTTA
TTAGGCTTTGGTGTGTGATGTATTTAGTATAAAAAGAAGAAAATGACTTGGTTTGTGTATTTATTGAAATCTGGGTGTTCTGTGTTTTGGGTGTATTTTTATAATTTGTC
ATTGTTTGTTTATTTTTCCTCTAGAGAAGTTACTCAAAAACATTTAACTGATTTTAAGGGAAATGTCCTATAAACAGGTTTGTAACTCATCTCACCCCTTCTTTTCTTCC
TCTCTTTCTCTCCTCAACTTCATTCTTTCTCTAGAATGAGGCAGAAATTCAATTAGGTGAAGTTTAATTAATATACATGTAATGTTTTTTTTTTCTGAAAACAGAATACA
TGTAATGTTTAAATGTTA
Protein sequenceShow/hide protein sequence
MQQPEQAQSQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLASIREELEALADPMRKEVAQVRKRIDAVNKELKPL
GHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVGESERLRLKKLEELSKNIDTIR