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Sed0004161 (gene) of Chayote v1 genome

Gene IDSed0004161
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:8426785..8427085
RNA-Seq ExpressionSed0004161
SyntenySed0004161
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580839.1 hypothetical protein SDJN03_20841, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2061.11Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD--HAYFHHIFQAVD----GGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF
        M KF ELLDVGVR AARFHAHCPQTARLYYHPP+ HDGD  H Y H  FQA D    GG S  L   C V+T A+A   D++IVF +  F
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD--HAYFHHIFQAVD----GGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF

KAG6596209.1 hypothetical protein SDJN03_09389, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2163.95Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD----HAYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIV
        MGKF ELLDVGVR AARFH+HCPQTARLYYHPP+ HDGD    H YFHH+FQA DGGR    S  L   C V T A+A   D+++V
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD----HAYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIV

KAG7027749.1 hypothetical protein SDJN02_08926, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-2163.95Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD----HAYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIV
        MGKF ELLDVGVR AARFH+HCPQTARLYYHPP+ HDGD    H YFHH+FQA DGGR    S  L   C V T A+A   D+++V
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD----HAYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIV

KGN59359.1 hypothetical protein Csa_002350 [Cucumis sativus]2.9e-1958.43Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD-----HAYFHHIFQAVDGGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF
        MGKF ELLDVGVR AARFH+HCPQTARLYYHPP+ HD D     H Y H IFQA DGG S  L     ++T A+    D++ VF S  F
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD-----HAYFHHIFQAVDGGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF

XP_011652134.1 uncharacterized protein LOC105434988 [Cucumis sativus]2.9e-1958.43Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD-----HAYFHHIFQAVDGGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF
        MGKF ELLDVGVR AARFH+HCPQTARLYYHPP+ HD D     H Y H IFQA DGG S  L     ++T A+    D++ VF S  F
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD-----HAYFHHIFQAVDGGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF

TrEMBL top hitse value%identityAlignment
A0A0A0LEL3 Uncharacterized protein1.4e-1958.43Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD-----HAYFHHIFQAVDGGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF
        MGKF ELLDVGVR AARFH+HCPQTARLYYHPP+ HD D     H Y H IFQA DGG S  L     ++T A+    D++ VF S  F
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGD-----HAYFHHIFQAVDGGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF

A0A1S3B7E5 uncharacterized protein LOC1034868224.5e-1857.61Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDH----AYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIVFQSVGF
        MGKF ELLDVGVR AARFH+HCPQTARLYYHPP+ HD DH     Y H IFQA DGGR    S  L     ++T A     D++ VF S  F
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDH----AYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIVFQSVGF

A0A2P5EN05 Uncharacterized protein6.3e-1265.38Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAA--HDGDHAYFHHIFQAV
        MGKF ELLDVGVR AARFH+HCPQT R+YYHPP+    D DH Y+HH++  +
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAA--HDGDHAYFHHIFQAV

A0A5A7TQ55 Uncharacterized protein4.5e-1857.61Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDH----AYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIVFQSVGF
        MGKF ELLDVGVR AARFH+HCPQTARLYYHPP+ HD DH     Y H IFQA DGGR    S  L     ++T A     D++ VF S  F
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDH----AYFHHIFQAVDGGR----SAHLAAPCAVQTAALAPPLDSQIVFQSVGF

A0A6J1DN79 uncharacterized protein LOC1110215592.7e-1857.95Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDHAYFHHIFQAVDGG--RSAHLAAPCAVQTA--ALAPPLDSQIVFQSVGF
        M K  ELLDVGVR AARFHAHCPQTARLYYHPP+ HD  H Y H I  A DGG   +AH  + C ++TA  A A   D++IVF +  F
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDHAYFHHIFQAVDGG--RSAHLAAPCAVQTA--ALAPPLDSQIVFQSVGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57450.1 unknown protein2.2e-1272.5Show/hide
Query:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDH
        MGK+ E+LDVGVR AARFH+HCPQTARLYYHPP+ +   H
Subjt:  MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAATTCGCTGAATTGTTAGACGTCGGAGTGAGAGCGGCGGCCAGATTTCACGCCCACTGTCCCCAAACTGCTCGCCTCTACTACCATCCTCCGGCCGCCCACGA
CGGCGACCACGCCTACTTCCACCACATTTTTCAAGCCGTTGACGGCGGACGCTCCGCCCATCTGGCGGCGCCCTGCGCTGTCCAGACGGCGGCTTTGGCCCCACCTTTGG
ATTCTCAGATCGTGTTTCAGTCTGTGGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
TTTGAAAATCAACAGAGTAAACATCAATGGGGAAATTCGCTGAATTGTTAGACGTCGGAGTGAGAGCGGCGGCCAGATTTCACGCCCACTGTCCCCAAACTGCTCGCCTC
TACTACCATCCTCCGGCCGCCCACGACGGCGACCACGCCTACTTCCACCACATTTTTCAAGCCGTTGACGGCGGACGCTCCGCCCATCTGGCGGCGCCCTGCGCTGTCCA
GACGGCGGCTTTGGCCCCACCTTTGGATTCTCAGATCGTGTTTCAGTCTGTGGGTTTTTGATGCTTTTATTTCATTTAGGG
Protein sequenceShow/hide protein sequence
MGKFAELLDVGVRAAARFHAHCPQTARLYYHPPAAHDGDHAYFHHIFQAVDGGRSAHLAAPCAVQTAALAPPLDSQIVFQSVGF