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Sed0004162 (gene) of Chayote v1 genome

Gene IDSed0004162
OrganismSechium edule (Chayote v1)
DescriptionProtein phosphatase 2C family protein
Genome locationLG07:8918298..8920623
RNA-Seq ExpressionSed0004162
SyntenySed0004162
Gene Ontology termsGO:0006470 - protein dephosphorylation (biological process)
GO:0004722 - protein serine/threonine phosphatase activity (molecular function)
InterPro domainsIPR001932 - PPM-type phosphatase domain
IPR015655 - Protein phosphatase 2C family
IPR036457 - PPM-type phosphatase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014877.1 putative protein phosphatase 2C 10 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4192.86Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+I+VVCFKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

XP_022140937.1 probable protein phosphatase 2C 9 [Momordica charantia]8.6e-4090.82Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLA EALKRESKDDI+I+VV FKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

XP_022922893.1 probable protein phosphatase 2C 9 [Cucurbita moschata]2.7e-4191.84Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+I+VVCF+G
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

XP_022985019.1 probable protein phosphatase 2C 9 [Cucurbita maxima]1.2e-4192.86Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+I+VVCFKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

XP_023553542.1 probable protein phosphatase 2C 9 [Cucurbita pepo subsp. pepo]9.2e-4293.88Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+IVVVCFKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

TrEMBL top hitse value%identityAlignment
A0A6J1CIG0 probable protein phosphatase 2C 94.1e-4090.82Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLA EALKRESKDDI+I+VV FKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

A0A6J1E817 probable protein phosphatase 2C 91.3e-4191.84Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+I+VVCF+G
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

A0A6J1FWV9 probable protein phosphatase 2C 91.6e-3989.8Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DI+SDTELLILA DGLWKVM+NQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+I+VV FKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

A0A6J1INP8 probable protein phosphatase 2C 9 isoform X11.6e-3989.8Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DI+SDTELLILA DGLWKVM+NQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+I+VV FKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

A0A6J1JC43 probable protein phosphatase 2C 95.8e-4292.86Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG
        GDVA VNG+LAVSRAFGDKNLKTHLR DPDIKN DIDSDTELLILA DGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDI+I+VVCFKG
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG

SwissProt top hitse value%identityAlignment
Q0JAA0 Probable protein phosphatase 2C 443.5e-2859.8Show/hide
Query:  LTLFAGDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVC
        +T F GDV  VNG+LAV+RAFGD++LK HL  +PD+++V I+S  E +ILA DGLWKVM NQEAVD+ +  KDPQ AAK+L  EAL R+SKDDI+ +V+ 
Subjt:  LTLFAGDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVC

Query:  FK
        F+
Subjt:  FK

Q7XQU7 Probable protein phosphatase 2C 411.1e-2970.1Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK
        GDV  V G+LAVSRAFGD+NLK+ L+ +PDIK  DID   ELL+LA DGLWKVM NQE VD+A+R KDPQ AAKQL AEALKR+SKDDI+ VVV F+
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK

Q8L7I4 Probable protein phosphatase 2C 174.6e-2864.95Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK
        GDV  VNG LAVSR FGDKNLK +L  +P+IK+V IDS T+ LILA DG+ KVM+NQEAVD+A++ KDP+ AA+Q+ AEALKR SKDDI+ +VV F+
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK

Q9LME4 Probable protein phosphatase 2C 92.3e-3270.1Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK
        GDV  VNG+LAVSRAFGDK LKTHL  +PDIK   +DS T++L+LA DG+WKVMTN+EA++IARR KDPQ+AAK+L AEAL+RESKDDI+ VVV F+
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK

Q9S9Z7 Probable protein phosphatase 2C 102.0e-3170.21Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVV
        GDV  VNG+LAVSRAFGDK+LKTHLR DPD+K+  ID  T++L+LA DGLWKVM NQEA+DIARR KDP +AAK+L  EAL+R+SKDDI+ +VV
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVV

Arabidopsis top hitse value%identityAlignment
AT1G22280.1 phytochrome-associated protein phosphatase type 2C1.7e-3370.1Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK
        GDV  VNG+LAVSRAFGDK LKTHL  +PDIK   +DS T++L+LA DG+WKVMTN+EA++IARR KDPQ+AAK+L AEAL+RESKDDI+ VVV F+
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK

AT1G22280.3 phytochrome-associated protein phosphatase type 2C1.7e-3370.1Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK
        GDV  VNG+LAVSRAFGDK LKTHL  +PDIK   +DS T++L+LA DG+WKVMTN+EA++IARR KDPQ+AAK+L AEAL+RESKDDI+ VVV F+
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK

AT1G34750.1 Protein phosphatase 2C family protein1.4e-3270.21Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVV
        GDV  VNG+LAVSRAFGDK+LKTHLR DPD+K+  ID  T++L+LA DGLWKVM NQEA+DIARR KDP +AAK+L  EAL+R+SKDDI+ +VV
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVV

AT1G78200.1 Protein phosphatase 2C family protein3.3e-2964.95Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK
        GDV  VNG LAVSR FGDKNLK +L  +P+IK+V IDS T+ LILA DG+ KVM+NQEAVD+A++ KDP+ AA+Q+ AEALKR SKDDI+ +VV F+
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK

AT1G78200.2 Protein phosphatase 2C family protein3.3e-2964.95Show/hide
Query:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK
        GDV  VNG LAVSR FGDKNLK +L  +P+IK+V IDS T+ LILA DG+ KVM+NQEAVD+A++ KDP+ AA+Q+ AEALKR SKDDI+ +VV F+
Subjt:  GDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCCCCTAAATTAACGTTGTTTGCAGGGGATGTTGCTAGCGTGAACGGGAAACTTGCCGTTTCTCGAGCATTTGGCGACAAAAACCTCAAAACACACTTGCGATG
TGATCCAGACATTAAGAATGTCGATATTGATTCTGACACTGAGCTTCTTATCTTGGCATGTGATGGTCTATGGAAGGTCATGACAAATCAAGAAGCTGTGGATATAGCTA
GGAGGACCAAAGATCCCCAGAGGGCAGCAAAGCAATTAGCAGCAGAAGCACTAAAAAGGGAAAGCAAAGACGACATCGCGATCGTCGTAGTTTGTTTCAAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
GTCATGTCGTTCAAATAAAGAACCAAAGCCTTTTAGTTTTACCACTACGCGCTTCAATCCCTAAATCCACTCGGATCCGCCGCTTCAATCCCTTATCCACTCCAAACCCG
CCGGAATCCGCCCTTCCTCCGCCGTCTGCAAGAATGCCGGCCGGCACCTGAATTTACATGTCCGCCCCTAAATTAACGTTGTTTGCAGGGGATGTTGCTAGCGTGAACGG
GAAACTTGCCGTTTCTCGAGCATTTGGCGACAAAAACCTCAAAACACACTTGCGATGTGATCCAGACATTAAGAATGTCGATATTGATTCTGACACTGAGCTTCTTATCT
TGGCATGTGATGGTCTATGGAAGGTCATGACAAATCAAGAAGCTGTGGATATAGCTAGGAGGACCAAAGATCCCCAGAGGGCAGCAAAGCAATTAGCAGCAGAAGCACTA
AAAAGGGAAAGCAAAGACGACATCGCGATCGTCGTAGTTTGTTTCAAAGGGTGAACTGAGTGTTGAGCTAAAGTTTGCTACCATCACTTATGAATTAAGGTAGTGTTTTA
AAATCCATGGCACTCAACTCTACTATCTTTAAGCCATCCCCAGCTCGAAGAATCTAAAGAAAAACCCGCACGAATTTCGATATCGCTCCAAAGTATGTTTAATCCCACAT
TTCTCTGCCACAACTTAAAACAAGGCATCTCTGTAGTGTATAAATATGAAGTTGTTGCTCTAAATTGGTGCAGTTTGATCTTTTTACTTGATTTGTTCTTGTTCTTGTTC
TGTAGATCCATGTATACCTTCATTTTTCAGCAACTTTTTTGTGAGCTTGTGGAACAGTTTGAAACTCTAGATTTGGGATTTGGGTCTTCATAGAACAGCTGCATGGGATG
TATGCAACTATTGTAATGATTGATAAGTATTTTTTTGGTTGGTATATCCTTATTCTTGAAAATAAATCATTTCTATGGATAAATAAATTGTACTTTGA
Protein sequenceShow/hide protein sequence
MSAPKLTLFAGDVASVNGKLAVSRAFGDKNLKTHLRCDPDIKNVDIDSDTELLILACDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDIAIVVVCFKG