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Sed0004170 (gene) of Chayote v1 genome

Gene IDSed0004170
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:46122380..46125867
RNA-Seq ExpressionSed0004170
SyntenySed0004170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]2.1e-0928.99Show/hide
Query:  METIIFTPFMNGNIVYGSNGIQYDAPPHGQMSASRYIGFDSFMNKLCECLLIDRNEGLEVVFKYQG--------IGITIRSESEFNFMINTATSQP--VE
        M+ + F  +M+GNIV G +GI+YD  P  +++  R   F++ ++   +   I+R++ +EV+F+Y          I I++RS+ +  FM++ A   P  VE
Subjt:  METIIFTPFMNGNIVYGSNGIQYDAPPHGQMSASRYIGFDSFMNKLCECLLIDRNEGLEVVFKYQG--------IGITIRSESEFNFMINTATSQP--VE

Query:  LYVSQPLFQRTQLRDIENNLEGQRLDEEEIEEPEENNGQNINDAEENTTNVVNMLATNDIEVNTDDD--------GSIQGFDEVPSFYTTLDMDVIDSLP
        LY+SQP            ++       EE+E  E  +   + D   + T     +ATND EV  DDD            G  EVP  +T +D++ + + P
Subjt:  LYVSQPLFQRTQLRDIENNLEGQRLDEEEIEEPEENNGQNINDAEENTTNVVNMLATNDIEVNTDDD--------GSIQGFDEVPSFYTTLDMDVIDSLP

Query:  DRGIDEE
        D    E+
Subjt:  DRGIDEE

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAATTATATTTACTCCATTTATGAATGGAAACATAGTTTATGGGTCAAATGGTATTCAATATGATGCTCCGCCGCATGGACAAATGAGTGCTAGTCGATATAT
TGGATTCGACTCATTCATGAACAAGTTATGCGAATGCCTTTTGATTGATAGAAATGAAGGGTTAGAGGTTGTTTTTAAATACCAGGGTATTGGGATAACTATACGAAGTG
AGAGTGAATTCAATTTTATGATAAATACGGCTACTTCCCAACCAGTAGAACTATATGTTTCTCAACCATTATTTCAGAGGACACAATTGAGAGATATAGAGAACAATTTA
GAAGGGCAACGTCTTGATGAAGAAGAAATTGAGGAACCAGAGGAGAATAATGGCCAGAATATAAACGATGCAGAGGAAAATACCACCAATGTTGTCAACATGTTGGCCAC
AAATGACATAGAGGTGAATACAGATGATGATGGATCGATCCAAGGTTTTGACGAAGTCCCTTCATTTTATACCACCTTAGATATGGATGTTATTGACTCGCTTCCAGATA
GAGGCATTGATGAAGAGATGGAACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAATTATATTTACTCCATTTATGAATGGAAACATAGTTTATGGGTCAAATGGTATTCAATATGATGCTCCGCCGCATGGACAAATGAGTGCTAGTCGATATAT
TGGATTCGACTCATTCATGAACAAGTTATGCGAATGCCTTTTGATTGATAGAAATGAAGGGTTAGAGGTTGTTTTTAAATACCAGGGTATTGGGATAACTATACGAAGTG
AGAGTGAATTCAATTTTATGATAAATACGGCTACTTCCCAACCAGTAGAACTATATGTTTCTCAACCATTATTTCAGAGGACACAATTGAGAGATATAGAGAACAATTTA
GAAGGGCAACGTCTTGATGAAGAAGAAATTGAGGAACCAGAGGAGAATAATGGCCAGAATATAAACGATGCAGAGGAAAATACCACCAATGTTGTCAACATGTTGGCCAC
AAATGACATAGAGGTGAATACAGATGATGATGGATCGATCCAAGGTTTTGACGAAGTCCCTTCATTTTATACCACCTTAGATATGGATGTTATTGACTCGCTTCCAGATA
GAGGCATTGATGAAGAGATGGAACGATGA
Protein sequenceShow/hide protein sequence
METIIFTPFMNGNIVYGSNGIQYDAPPHGQMSASRYIGFDSFMNKLCECLLIDRNEGLEVVFKYQGIGITIRSESEFNFMINTATSQPVELYVSQPLFQRTQLRDIENNL
EGQRLDEEEIEEPEENNGQNINDAEENTTNVVNMLATNDIEVNTDDDGSIQGFDEVPSFYTTLDMDVIDSLPDRGIDEEMER