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Sed0004176 (gene) of Chayote v1 genome

Gene IDSed0004176
OrganismSechium edule (Chayote v1)
Descriptionlow temperature-induced protein lt101.2-like
Genome locationLG04:27676516..27677319
RNA-Seq ExpressionSed0004176
SyntenySed0004176
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137807.1 low temperature-induced protein lt101.2 [Cucumis sativus]1.0e-1374.07Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATF++VLLA  +PP+GVFLRYGI +EFWI LVLTFF Y+PGI+YA+YVL+G
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

XP_008442650.1 PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo]6.0e-1477.78Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATFV+VLLA  +PP+GVFLRYGI +EFWI LVLTFF Y+PGIVYA+YVL+G
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

XP_022145681.1 low temperature-induced protein lt101.2-like [Momordica charantia]7.8e-1479.63Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATF++VLLA  +PPLGVFLRYGI +EFWIAL+LTF  YLPGIVYA+YVLVG
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

XP_022945600.1 low temperature-induced protein lt101.2-like [Cucurbita moschata]1.0e-1379.63Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATFV+VL+A  +PPLGVFLRYGI VEFWI LVLTF  YLPGI+YA+YVLVG
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

XP_038906189.1 low temperature-induced protein lt101.2-like [Benincasa hispida]1.0e-1377.78Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATF++VLLA  +PPLGVFLRYGI +EFWI LVLT F YLPGI+YA+YVLVG
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

TrEMBL top hitse value%identityAlignment
A0A0A0LAU7 Uncharacterized protein4.9e-1474.07Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATF++VLLA  +PP+GVFLRYGI +EFWI LVLTFF Y+PGI+YA+YVL+G
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

A0A1S3B667 low temperature-induced protein lt101.2-like2.9e-1477.78Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATFV+VLLA  +PP+GVFLRYGI +EFWI LVLTFF Y+PGIVYA+YVL+G
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

A0A6J1CX15 low temperature-induced protein lt101.2-like3.8e-1479.63Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATF++VLLA  +PPLGVFLRYGI +EFWIAL+LTF  YLPGIVYA+YVLVG
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

A0A6J1G1E1 low temperature-induced protein lt101.2-like4.9e-1479.63Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATFV+VL+A  +PPLGVFLRYGI VEFWI LVLTF  YLPGI+YA+YVLVG
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

A0A6J1KU26 low temperature-induced protein lt101.2-like4.9e-1479.63Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGSATFV+VL+A  +PPLGVFLRYGI VEFWI LVLTF  YLPGI+YA+YVLVG
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI31.5e-1266.04Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLV
        MGSAT ++V+LA +LPP+GVFLRY + VEFWI L+LT   Y+PGI+YA+YVLV
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLV

P68179 Low temperature-induced protein lt101.11.5e-1266.04Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLV
        MGSAT ++V+LA +LPP+GVFLRY + VEFWI L+LT   Y+PGI+YA+YVLV
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLV

Q9ARD5 Low temperature-induced protein lt101.22.8e-1469.81Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLV
        M SATF++V+LA +LPP+GVFLRYG+AVEFWI L+LT   Y+PGI+YA+YVLV
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLV

Q9ZNQ7 Hydrophobic protein RCI2A6.8e-1367.31Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL
        M +ATFV +++A LLPPLGVFLR+G  VEFWI LVLT   Y+PGI+YA+YVL
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL

Q9ZNS6 Hydrophobic protein RCI2B4.0e-1365.38Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL
        M +ATFV+++LA +LPPLGVFL++G  VEFWI L+LT F YLPGI+YALY++
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family7.8e-1259.62Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL
        MGS  F++VL A  +PP+GVFLRYG+ +EFW+ L+LT FA++PG++YA+YVL
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL

AT2G38905.1 Low temperature and salt responsive protein family1.5e-1568.52Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG
        MGS TF++++LA LLPP+GVFLRYG  VEFWI L+LT   Y+PGI+YA+YVLVG
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVG

AT3G05880.1 Low temperature and salt responsive protein family4.9e-1467.31Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL
        M +ATFV +++A LLPPLGVFLR+G  VEFWI LVLT   Y+PGI+YA+YVL
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL

AT3G05890.1 Low temperature and salt responsive protein family2.9e-1465.38Show/hide
Query:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL
        M +ATFV+++LA +LPPLGVFL++G  VEFWI L+LT F YLPGI+YALY++
Subjt:  MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVL

AT4G30650.1 Low temperature and salt responsive protein family1.2e-0761.22Show/hide
Query:  FVQVLLAFLLPPLGVFLRYG-IAVEFWIALVLTFFAYLPGIVYALYVLV
        F ++L+A LLPPLGV L+ G   VEF I LVLT   Y+PGI+YALYV+V
Subjt:  FVQVLLAFLLPPLGVFLRYG-IAVEFWIALVLTFFAYLPGIVYALYVLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCAGCTACCTTCGTCCAAGTGCTTCTCGCCTTTCTCCTCCCTCCCCTCGGCGTCTTCCTCCGCTACGGCATTGCGGTTGAGTTTTGGATTGCTTTGGTGCTCAC
GTTTTTCGCATACCTTCCTGGAATTGTTTACGCCCTTTATGTATTGGTGGGAAAGGATGAACCAGTCGTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCAGCTACCTTCGTCCAAGTGCTTCTCGCCTTTCTCCTCCCTCCCCTCGGCGTCTTCCTCCGCTACGGCATTGCGGTTGAGTTTTGGATTGCTTTGGTGCTCAC
GTTTTTCGCATACCTTCCTGGAATTGTTTACGCCCTTTATGTATTGGTGGGAAAGGATGAACCAGTCGTCTCTTAA
Protein sequenceShow/hide protein sequence
MGSATFVQVLLAFLLPPLGVFLRYGIAVEFWIALVLTFFAYLPGIVYALYVLVGKDEPVVS