; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004184 (gene) of Chayote v1 genome

Gene IDSed0004184
OrganismSechium edule (Chayote v1)
DescriptionChromo domain-containing protein isoform 1
Genome locationLG03:820039..826224
RNA-Seq ExpressionSed0004184
SyntenySed0004184
Gene Ontology termsGO:0010190 - cytochrome b6f complex assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51853.2 hypothetical protein Csa_008870 [Cucumis sativus]3.6e-6680.25Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        M+E+PS A RRRRFAVDDGADLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWMVGRRCLQ+AR+KRKKRKL+ R+ EC GA A + G 
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
              GLPE+  GSGEE+E  GN SARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_008458773.1 PREDICTED: uncharacterized protein LOC103498078 [Cucumis melo]5.5e-6780.86Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        M+E+PS A RRRRFAVDDGADLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWMVGRRCLQ+AR+KRKKRKL+RR+ EC GA A + G 
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
              GLPE+  GSGEE+E  GN SARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_011655414.1 uncharacterized protein LOC105435525 [Cucumis sativus]3.6e-6680.25Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        M+E+PS A RRRRFAVDDGADLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWMVGRRCLQ+AR+KRKKRKL+ R+ EC GA A + G 
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
              GLPE+  GSGEE+E  GN SARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_023536558.1 uncharacterized protein LOC111797691 [Cucurbita pepo subsp. pepo]3.1e-6279.64Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAA--EDG
        MEE+PSP  RRRRF VDDG DLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWM+GRRCLQRA   RKKRKLIRRK EC GAAA  E G
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAA--EDG

Query:  GDPASGVMGLPEMLAGSGEEEEEG---GNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
          PA     LPE++ GSGEEEEE    GN SARFEAERIWLQLYQ+GQLGFGRVSFTGN+N WPNSN
Subjt:  GDPASGVMGLPEMLAGSGEEEEEG---GNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

XP_038891069.1 uncharacterized protein LOC120080480 [Benincasa hispida]1.5e-6782.1Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        M+E+PS   RRRRFAVDDGADLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL L+KLPWMVGRRCLQRAR+KRKKRKLIRR+ EC GA A + G 
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
         A+   GLPE+  GSGEEEE  GN SARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

TrEMBL top hitse value%identityAlignment
A0A0A0KR58 Uncharacterized protein1.7e-6680.25Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        M+E+PS A RRRRFAVDDGADLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWMVGRRCLQ+AR+KRKKRKL+ R+ EC GA A + G 
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
              GLPE+  GSGEE+E  GN SARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A1S3C8M3 uncharacterized protein LOC1034980782.7e-6780.86Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        M+E+PS A RRRRFAVDDGADLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWMVGRRCLQ+AR+KRKKRKL+RR+ EC GA A + G 
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
              GLPE+  GSGEE+E  GN SARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A5A7T2E5 Uncharacterized protein2.7e-6780.86Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        M+E+PS A RRRRFAVDDGADLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWMVGRRCLQ+AR+KRKKRKL+RR+ EC GA A + G 
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
              GLPE+  GSGEE+E  GN SARFEAERIWLQLYQVGQLGFGRVSFTGN+NLWPNSN
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A6J1HEE2 uncharacterized protein LOC1114632061.3e-6177.51Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD
        MEE+PSP  RRRRF VDDG DLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWM+GRRCLQRA   RKKRKLIRRK EC GAAA    +
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGD

Query:  PASGVM---GLPEMLAGSGEEEEEG----GNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
         A G+    GLPE++ GS EEEEE     GN SARFEAERIWLQLYQ+GQLGFGRVSFTGN+N WPNSN
Subjt:  PASGVM---GLPEMLAGSGEEEEEG----GNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

A0A6J1JH40 uncharacterized protein LOC1114869581.3e-6176.88Show/hide
Query:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAA--EDG
        MEE+PSP  RRRRF VDDG DLIDCSGKHCR+CTAGLVADCVAVCCCPCSVVSFLAL LVKLPWM+GRRCLQRA   RKKRKLIRRK EC GAAA  E G
Subjt:  MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAA--EDG

Query:  GDPASGVMGLPEMLAGSGEEEEEG---------GNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN
          PA    GLPE++ GS EEEEE          GN SARFEAERIWLQLYQ+GQLGFGRVSFTGN+N WPNSN
Subjt:  GDPASGVMGLPEMLAGSGEEEEEG---------GNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01516.1 unknown protein1.3e-2643.79Show/hide
Query:  CSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEE------------------CGGAAAEDGGD------
        CSGK CR+  A  +ADCVA+CCCPC+VV+   L  VK+PWM+GR+C+ R    +K+ K I R++                   CGG   +   D      
Subjt:  CSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEE------------------CGGAAAEDGGD------

Query:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTG
           G +   E    S +EEEE   +SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  PASGVMGLPEMLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTG

AT5G06380.1 unknown protein9.3e-0434.71Show/hide
Query:  CSGKHCRA-CTAGLVADCVAVC-CCPCSVVSFLALTLVKLPWMVGRRCLQRARQKR-KKRKLIRRKEECGGAAAEDGGDPASGVMGLPEMLAGSGEEEEE
        C G    A C  G  A C A+C C PCSVV+ + L + KLP  + RR ++R R+KR  K++ +    E G      GG     V  L        EEEEE
Subjt:  CSGKHCRA-CTAGLVADCVAVC-CCPCSVVSFLALTLVKLPWMVGRRCLQRARQKR-KKRKLIRRKEECGGAAAEDGGDPASGVMGLPEMLAGSGEEEEE

Query:  GGNLSARFEAERIWLQLYQVG
                E E +W + Y  G
Subjt:  GGNLSARFEAERIWLQLYQVG

AT5G14690.1 unknown protein1.2e-2739.89Show/hide
Query:  RRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAED------------
        RRRR       D + CS K CR+  A  +ADCVA+CCCPC++++ L LTLVK+PWM+GRRCL    + +KKR++I R++  G    ED            
Subjt:  RRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAED------------

Query:  -------------GGDPASG---------VMGLPEMLAGSGEEEE----------EGGNLSARFEAERIWLQLYQVGQLGFGRVSFTG
                     GG    G         V+     L    EEEE          +   +SAR EAER+WL+LYQ+G LGFGRVSFTG
Subjt:  -------------GGDPASG---------VMGLPEMLAGSGEEEE----------EGGNLSARFEAERIWLQLYQVGQLGFGRVSFTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAACCCATCTCCAGCCGCACGGCGGCGGAGATTCGCCGTGGACGACGGCGCCGATCTAATCGACTGCTCCGGCAAGCATTGCCGGGCGTGCACCGCCGGGTT
GGTGGCCGATTGCGTGGCCGTGTGCTGCTGCCCGTGCTCCGTGGTCAGCTTCTTGGCTCTGACCCTGGTCAAGCTGCCGTGGATGGTCGGCCGGCGGTGCCTACAGAGGG
CGAGGCAGAAGAGGAAAAAGAGGAAATTGATTCGCCGGAAAGAGGAATGCGGCGGCGCTGCGGCGGAAGACGGCGGAGATCCGGCGTCGGGGGTGATGGGTCTGCCGGAA
ATGTTGGCGGGATCCGGCGAGGAAGAAGAAGAGGGGGGAAATTTGAGTGCTAGATTTGAAGCAGAGAGAATTTGGTTGCAGTTGTATCAGGTGGGCCAGTTGGGTTTTGG
AAGAGTTTCTTTTACTGGGAATACAAATCTTTGGCCCAACTCCAATTAA
mRNA sequenceShow/hide mRNA sequence
AATTCTCTCTTTCTCTCTGCATTTGTTCAGTCATTACAGAGTTTTTTTTTAATGCATGCTTATATTTTAATCCCAAATGCTTACAATTACTCATCAACATCATTTTCGAT
TCTGTTTTTATATTTATTTTTTTTATTTAAATCTCGCAGAGTAAGAATCAGAGACTTCGCATTTCAACCAGATTTCTCTTTCGTTCTCATTTCAGATCCGATTTTCATTG
AGCAACAACGCCACTGTGAATTTCCCGATTTATCGATCCACCATTTTTTAGTGTTGGGGAAAAAGAACAGAGATGGGCCCTCTTTCTTTGAATGGGACTATGCTTTGAAT
TGCCTCTAATCGAGCAAAAATTTATTAAAAAAAGAAGTTCAAAAAATGGAAGAAAACCCATCTCCAGCCGCACGGCGGCGGAGATTCGCCGTGGACGACGGCGCCGATCT
AATCGACTGCTCCGGCAAGCATTGCCGGGCGTGCACCGCCGGGTTGGTGGCCGATTGCGTGGCCGTGTGCTGCTGCCCGTGCTCCGTGGTCAGCTTCTTGGCTCTGACCC
TGGTCAAGCTGCCGTGGATGGTCGGCCGGCGGTGCCTACAGAGGGCGAGGCAGAAGAGGAAAAAGAGGAAATTGATTCGCCGGAAAGAGGAATGCGGCGGCGCTGCGGCG
GAAGACGGCGGAGATCCGGCGTCGGGGGTGATGGGTCTGCCGGAAATGTTGGCGGGATCCGGCGAGGAAGAAGAAGAGGGGGGAAATTTGAGTGCTAGATTTGAAGCAGA
GAGAATTTGGTTGCAGTTGTATCAGGTGGGCCAGTTGGGTTTTGGAAGAGTTTCTTTTACTGGGAATACAAATCTTTGGCCCAACTCCAATTAATTAGATCAAATTTAAT
TACTCTAATTTGTAAAGTTTAGTAAATGAGTCAATTTATTAATTTAGCATTGTGTTTTCAAGTATGGTCTCTACTTAGCCTCTTAATTTTTGAAACATTTCATTTTACTT
CCAAAACTTGGAATGTGTCTCCC
Protein sequenceShow/hide protein sequence
MEENPSPAARRRRFAVDDGADLIDCSGKHCRACTAGLVADCVAVCCCPCSVVSFLALTLVKLPWMVGRRCLQRARQKRKKRKLIRRKEECGGAAAEDGGDPASGVMGLPE
MLAGSGEEEEEGGNLSARFEAERIWLQLYQVGQLGFGRVSFTGNTNLWPNSN