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Sed0004195 (gene) of Chayote v1 genome

Gene IDSed0004195
OrganismSechium edule (Chayote v1)
DescriptionCysteine proteinase rd21a-like protein
Genome locationLG01:64857799..64858494
RNA-Seq ExpressionSed0004195
SyntenySed0004195
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsIPR000668 - Peptidase C1A, papain C-terminal
IPR038765 - Papain-like cysteine peptidase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022752198.1 macrodontain-1-like [Durio zibethinus]2.0e-0529.13Show/hide
Query:  METAYNIKHRPKNLVRLAPQYIIDCLVCPN-----IFNVTGAILGKCYPLSHMQEYEWVVLKGIVEEEQYPYMAALGICRKIS-PTFTISAYKHIT----
        +E+   I+   + L  L+PQ +IDC VC +     I   TG     CYP +  + ++W++   +  E  YPY+A  G C  ++ P  ++   K++     
Subjt:  METAYNIKHRPKNLVRLAPQYIIDCLVCPN-----IFNVTGAILGKCYPLSHMQEYEWVVLKGIVEEEQYPYMAALGICRKIS-PTFTISAYKHIT----

Query:  DLHNLNWHIQRQPLSAVLYATTEFMKL
        +   L  H+ R PL+AV+  T E + L
Subjt:  DLHNLNWHIQRQPLSAVLYATTEFMKL
TrEMBL top hitse value%identityAlignment
A0A2K3N4B1 Cysteine proteinase rd21a-like protein6.8e-0430.77Show/hide
Query:  GAMETAYNIKHRPKNLVRLAPQYIIDCLVCPNIFNVTGAILGKCYPLSHMQEYEWVVLKGIVEEEQYPYMAALGICRKISPT----FTISAYKHI-----
        GA+E  Y IK +PK L+  + Q +IDC VC           G          +E++   GI  EE YPYM A  ICR+   T      I  YK +     
Subjt:  GAMETAYNIKHRPKNLVRLAPQYIIDCLVCPNIFNVTGAILGKCYPLSHMQEYEWVVLKGIVEEEQYPYMAALGICRKISPT----FTISAYKHI-----

Query:  ---TDLHNLNWHIQRQPLSAVLYATTEFMK
             L+ +   ++RQP+   L    E +K
Subjt:  ---TDLHNLNWHIQRQPLSAVLYATTEFMK
A0A6P5ZH55 macrodontain-1-like9.5e-0629.13Show/hide
Query:  METAYNIKHRPKNLVRLAPQYIIDCLVCPN-----IFNVTGAILGKCYPLSHMQEYEWVVLKGIVEEEQYPYMAALGICRKIS-PTFTISAYKHIT----
        +E+   I+   + L  L+PQ +IDC VC +     I   TG     CYP +  + ++W++   +  E  YPY+A  G C  ++ P  ++   K++     
Subjt:  METAYNIKHRPKNLVRLAPQYIIDCLVCPN-----IFNVTGAILGKCYPLSHMQEYEWVVLKGIVEEEQYPYMAALGICRKIS-PTFTISAYKHIT----

Query:  DLHNLNWHIQRQPLSAVLYATTEFMKL
        +   L  H+ R PL+AV+  T E + L
Subjt:  DLHNLNWHIQRQPLSAVLYATTEFMKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTTGTGGAGCTATGGAGACGGCCTATAACATCAAACATAGGCCAAAGAATTTAGTGAGGCTAGCCCCACAATACATAATTGACTGCCTCGTTTGTCCAAATAT
TTTCAATGTAACAGGTGCAATACTCGGAAAATGTTATCCATTGTCACATATGCAAGAATACGAGTGGGTTGTTTTAAAGGGTATCGTCGAGGAGGAACAGTATCCGTATA
TGGCTGCCCTCGGAATTTGCAGAAAGATATCGCCGACCTTCACCATTAGTGCCTATAAACATATTACTGATTTACACAATTTAAATTGGCACATACAACGTCAACCGCTC
TCAGCTGTCTTATACGCTACCACAGAATTCATGAAGTTGGAGAGGCTTTGGAGTCGAACAAGGCCAAGCTTTTTGGATAATCAAAAACAGCTGGGGCGAGGGATGGGGCG
TAAACGGTTATGGAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTTGTGGAGCTATGGAGACGGCCTATAACATCAAACATAGGCCAAAGAATTTAGTGAGGCTAGCCCCACAATACATAATTGACTGCCTCGTTTGTCCAAATAT
TTTCAATGTAACAGGTGCAATACTCGGAAAATGTTATCCATTGTCACATATGCAAGAATACGAGTGGGTTGTTTTAAAGGGTATCGTCGAGGAGGAACAGTATCCGTATA
TGGCTGCCCTCGGAATTTGCAGAAAGATATCGCCGACCTTCACCATTAGTGCCTATAAACATATTACTGATTTACACAATTTAAATTGGCACATACAACGTCAACCGCTC
TCAGCTGTCTTATACGCTACCACAGAATTCATGAAGTTGGAGAGGCTTTGGAGTCGAACAAGGCCAAGCTTTTTGGATAATCAAAAACAGCTGGGGCGAGGGATGGGGCG
TAAACGGTTATGGAAGAATTAG
Protein sequenceShow/hide protein sequence
MAICGAMETAYNIKHRPKNLVRLAPQYIIDCLVCPNIFNVTGAILGKCYPLSHMQEYEWVVLKGIVEEEQYPYMAALGICRKISPTFTISAYKHITDLHNLNWHIQRQPL
SAVLYATTEFMKLERLWSRTRPSFLDNQKQLGRGMGRKRLWKN