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Sed0004216 (gene) of Chayote v1 genome

Gene IDSed0004216
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:7847889..7850173
RNA-Seq ExpressionSed0004216
SyntenySed0004216
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583459.1 hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sororia]9.0e-5887.88Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MT+MLTFLFCLSSF FLSIA+AEGRAPHGLVYESP+AFSPMAYDFFHPSTQ P+AKDPCGASKCSPLP+AAQVQSTPAKESKYSTT QKG HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAV LA+GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
KAG7019217.1 hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-5888.64Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MT+MLTFLFCLSSF FLSIA+AEGRAPHGLVYESP+AFSPMAYDFFHPSTQ P+AKDPCGASKCSPLP+AAQVQSTPAKESKYSTT QKG HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAVFLA+GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
XP_008457527.1 PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]4.5e-5785.61Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MTRMLTFLFCLSSF FLS+ARA+GRAPHGLVYESP+AFSPMAYDFFHPSTQNP+ KDPCG SKCSPLP+AAQVQSTPA+ESKYSTT Q  +HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAVFLA+GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
XP_011657962.2 uncharacterized protein LOC105435923 [Cucumis sativus]1.7e-5685.61Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MTRMLTFLFCL+SF FLSIA+A+GRAPHGLVYESP+AFSPMAYDFFHPSTQNPS KDPCG SKCSPLP+AAQVQSTPAKESKYSTT Q   HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAVFL +GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
XP_038876402.1 uncharacterized protein LOC120068840 [Benincasa hispida]1.5e-5787.69Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MTRMLTFLFCL+SF FLSIARA+GRAPHGLVYESP+AFSPMAYDFFHPSTQNP+ KD CG SKCSPLP+AAQVQSTPA+ESKYSTT QKG HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRA
        GIVFGI FAVFLA+GVYYVLHTRQANANRA
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRA
TrEMBL top hitse value%identityAlignment
A0A0A0LV85 Uncharacterized protein2.8e-5786.36Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MTRMLTFLFCL+SF FLSIARA+GRAPHGLVYESP+AFSPMAYDFFHPSTQNPS KDPCG SKCSPLP+AAQVQSTPAKESKYSTT Q   HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAVFL +GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
A0A1S3C6E2 uncharacterized protein LOC1034971982.2e-5785.61Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MTRMLTFLFCLSSF FLS+ARA+GRAPHGLVYESP+AFSPMAYDFFHPSTQNP+ KDPCG SKCSPLP+AAQVQSTPA+ESKYSTT Q  +HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAVFLA+GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
A0A5A7SXJ1 Uncharacterized protein2.2e-5785.61Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MTRMLTFLFCLSSF FLS+ARA+GRAPHGLVYESP+AFSPMAYDFFHPSTQNP+ KDPCG SKCSPLP+AAQVQSTPA+ESKYSTT Q  +HR+GAGG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAVFLA+GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
A0A6J1DWP3 uncharacterized protein LOC1110250997.7e-5584.85Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        MT+MLTFLFCLSS  FLS+ARAEGRAPHGLVYESP+AFSPMAYDFFHPS QN +AKDPC ASKCSPLP+AAQVQSTPA++SKYST  QKGEH LGAGGVL
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIV GI FAVFLA+GVYYVL TRQANANRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
A0A6J1GD80 uncharacterized protein LOC1114528841.3e-4978.79Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL
        M + LTFLF LSSF+FLSI RAEGRAPHGLVYE+P+AFSPMAYDFFHP T++P+A+DPCGASKCSPLP+AAQ+QS PA+ESKYSTTTQKGE   G GG+L
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVL

Query:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
        GIVFGI FAVFLA+GVYYVL TR AN NRA S
Subjt:  GIVFGIAFAVFLAIGVYYVLHTRQANANRATS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28410.1 unknown protein9.4e-2148.33Show/hide
Query:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAK-DPCGASKCSPLPVAAQVQSTPAKESK-----YSTTTQKG--EH
        MT     +F  SS    + A A+ RAPHGL YE+P+AFSP A+DFFH   +NP    +PC  S CSPLPVAA+VQ   AK  +      ST T+ G  EH
Subjt:  MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAK-DPCGASKCSPLPVAAQVQSTPAKESK-----YSTTTQKG--EH

Query:  RLGAGGVLGIVFGIAFAVFL
             GV+GI+FG+AFAV +
Subjt:  RLGAGGVLGIVFGIAFAVFL
AT5G60650.1 unknown protein2.9e-1437.41Show/hide
Query:  MTRMLTFLF-CLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPST-----QNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYS----TTTQKG
        +T  L F F CLS    +SIA +  R  HG  Y +P AFSP AYDFFHP +      NP    P   S  SP P    +    ++ SK S    TT++  
Subjt:  MTRMLTFLF-CLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPST-----QNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYS----TTTQKG

Query:  EHRLGAGGVLGIVFGIAFAVFLAIGVYYVLHTRQANANR
            G G  +G+V G++F  FL++G+Y+V+  ++AN  R
Subjt:  EHRLGAGGVLGIVFGIAFAVFLAIGVYYVLHTRQANANR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTCGCATTTCTTTCCATTGCCCGAGCTGAAGGGAGAGCCCCCCACGGCTTGGTATACGAGAGCCCGATTGC
CTTCTCCCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGAATCCGAGTGCCAAAGACCCATGTGGTGCATCCAAATGCTCCCCCTTGCCCGTTGCAGCTCAAGTGC
AATCTACTCCTGCAAAAGAAAGCAAATACTCCACAACAACCCAGAAAGGTGAGCATCGTCTCGGGGCTGGCGGGGTTCTGGGAATTGTGTTTGGCATCGCATTTGCTGTA
TTTTTGGCAATAGGGGTGTACTATGTACTACATACTCGCCAAGCCAATGCAAACCGAGCTACATCATTGTCTACAAAACTTGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
GTGATTATTCTAAATTTAAATGGGGTTGTTAGACCACACTTTTTGGGGTGCATGTGAGTCAATAATGAGTAGCTTTAACTTCACTTTGATTGATAGAAAAGCTTGTGCTT
CAACAAAGGAGAAATTTAATTAATGAGATTGATTAACGTGTAATCAAAACAAAATATATATGATTGAACACATTATATTGTTAATCTCCTGGCCCCCATATTCTTATGTG
TTCAATTGGGATAAGATAAAATCAAATTCTACAGGCCAGCACTCAAATATAGGACATAATTTTAAGTGTGTTGAGAGAAATGGTGTCCTACCGTTTTGGAACCTTCCCAA
GAGTGGATTGAAAACTTAGCTTCTCCACCAAGCATGTTATTTTTCTTGACCTTGGGAGGGCAATTTGGTAAATTCGCCCGAAGGGATAGGAGAGAATGCAGTTCTTATGA
TTGTGTCCCTTCCTTCCAACCTCTTTTTTTTTTCTTAATCACCAAAATTCAAGTCCAAGCAACAACCACTTCTCAATACAACTATAAATGATTCCAAAAGCACCACAAAA
GGAAGTACAATCACAACATACCTCTGTTTCTGCTTCTACTTCAAGGCATTCGGTTGAGGCAAATCGACAAACATGACTCGAATGCTTACTTTCCTGTTCTGTCTCTCTTC
CTTCGCATTTCTTTCCATTGCCCGAGCTGAAGGGAGAGCCCCCCACGGCTTGGTATACGAGAGCCCGATTGCCTTCTCCCCAATGGCATATGATTTCTTCCATCCAAGCA
CCCAGAATCCGAGTGCCAAAGACCCATGTGGTGCATCCAAATGCTCCCCCTTGCCCGTTGCAGCTCAAGTGCAATCTACTCCTGCAAAAGAAAGCAAATACTCCACAACA
ACCCAGAAAGGTGAGCATCGTCTCGGGGCTGGCGGGGTTCTGGGAATTGTGTTTGGCATCGCATTTGCTGTATTTTTGGCAATAGGGGTGTACTATGTACTACATACTCG
CCAAGCCAATGCAAACCGAGCTACATCATTGTCTACAAAACTTGATGCTTGACATACGAGACTAACAACACTTGAGCACTTCTCTTCCTCTTTTAGTTTCTTATTCTTTT
CTTGTTTATTTCTCTAAGGTTGATAGCGACTATGGCTATACATATTGTATTACATAGGAGGTTGTTCTAGAGCTATCATCTAGGTTGTTCTGTCTGAAGTTTTCTTCTTC
ATCCATCCTCTCACCCCATGTGTAAAATTGAGTTTCTAAAATTTTTCTAAAGTTTCTGGCTCACATCCTACTAATAAGTTGTACAAGAACAAATGTAAAAAAAGACTCAC
GACAATGATGCGAAAAATTAAGGCACAACCAATTATTTCTACCAAAACAATAATCAAATGAAGACAAATATAAGCCCCGGCACAGTGATTGAAAACTTGGGCTTTGAAGG
TATGCTCCCTTCAAGGTTCCACGTTCGAGACTCACTTGTGACATTACTTCTTCGATGTCTCCTGATACCTAGCCTAAGGACGGACGTGGTTACCCTTGTTTCAAAAAAAA
TTGAAGAAAAATATAATGAAAAAATTATTTACCGTTTCCACCCTAAATGCTTGCAACAAAGAAGTGATAAACAAGTTCTAAACTCAATATAAACAAAAATGTAACTGTTT
GCAAGAAAGTTAAAAGAGATTTCAACAAAAAGGTTTTAGGAACAGTTTTACATGTAGAGAACACATAATGGGTTGTGTACGATCGTCTACAAACCCAAATGTTGAAAGTC
ATGCATATATTGTCAGATCAATGCCAAGCGAATCACACTGATAAATGAAACACTAAACCGTTAGTATTGCACAAAAAATGTGTAATCTCACATTGAAGTGACCAATAGCC
TTGCCTGTTCAGACACACCAAAAGACTAAATGAATAGAAACAAAATCAAGTACTAGGAGCCTATTAAGCAACTGGAACTTTATGGCATGGCCTTAGATTAGAACGTCCGT
TTGAATTCCATTGTTTGCAAAGGCATACTTTGAGATACCTAATACCCAACAATCAACATCCAACATTATTTTTCTGGACTTCAACTTTCTCACCCCATTCACAAGTATCA
CTCTACTCAAGGAATAACTACTGCATACAGCCTCAAAGGGTGACAGATAAATAGTTGTGTAAAAGGACATGCCGCAGAAAAACTCGACTCTTTCCACCCACTTGCCCCTT
GTTTAGAAGCATCATAGATAAGGTATTGATTTTCTTTTTTTTTTTTTTTTTTTGAAACCAAGGTAACCACGCCCGTCCCTAGGCC
Protein sequenceShow/hide protein sequence
MTRMLTFLFCLSSFAFLSIARAEGRAPHGLVYESPIAFSPMAYDFFHPSTQNPSAKDPCGASKCSPLPVAAQVQSTPAKESKYSTTTQKGEHRLGAGGVLGIVFGIAFAV
FLAIGVYYVLHTRQANANRATSLSTKLDA