; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004219 (gene) of Chayote v1 genome

Gene IDSed0004219
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationLG07:39915745..39920249
RNA-Seq ExpressionSed0004219
SyntenySed0004219
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034049.1 putative RNA-binding protein ARP1 isoform X1 [Cucumis melo var. makuwa]1.5e-11783Show/hide
Query:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA
        ++ N G+FGDTTLTKVFVGGLAWETPKEAMRDHF++FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    +
Subjt:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA

Query:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQ-AMVGANTLMPM
        ++  PP  PQPGSNGGGPRTT+A  A GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GY+NGHYTQMYPGQ AMVG NTLMPM
Subjt:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQ-AMVGANTLMPM

Query:  YPMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPGPFLS
        YP+YHYHQSHAMGMPAHIFPPSPT AGPF  +PP S++SKP +VGPNPGPF +
Subjt:  YPMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPGPFLS

XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]3.9e-11885.08Show/hide
Query:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA
        +S N G+FGDTTLTKVFVGGLAWETPKEAMRDHF +FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    +
Subjt:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA

Query:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMY
        ++  PP  PQPGSN GGPRTTSA  A GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GYMNGHYTQMYPGQAMVGANTLMPMY
Subjt:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMY

Query:  PMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG
        P+YHYHQSHAMGMPAHIFPPSPT AGPF  +PP S++SKP +VGPNPG
Subjt:  PMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]2.0e-11785.02Show/hide
Query:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA
        +S N G+FGDTTLTKVFVGGLAWETPKEAMRDHF +FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    +
Subjt:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA

Query:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMY
        ++  PP  PQPGSN GGPRTTSA  A GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GYMNGHYTQMYPGQAMVGANTLMPMY
Subjt:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMY

Query:  PMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNP
        P+YHYHQSHAMGMPAHIFPPSPT AGPF  +PP S++SKP +VGPNP
Subjt:  PMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNP

XP_038891949.1 probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]5.5e-12086.64Show/hide
Query:  SNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPAS
        +NN G+FGDTTLTKVFVGGLAWETPKEAMRDHFE+FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    ++
Subjt:  SNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPAS

Query:  APPPPPPPQPGSNGGGPRTTS--AAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMYP
        +  PP  PQPGSNGGGPRTTS  A  GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GYMNGHYTQMYPGQAMVGANTLMPMYP
Subjt:  APPPPPPPQPGSNGGGPRTTS--AAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMYP

Query:  MYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG
        +YHYHQSHAMGMPAHIFPPSPT AGPF  +PP+S++SKPASVGPNPG
Subjt:  MYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG

XP_038891950.1 probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]2.1e-11986.59Show/hide
Query:  SNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPAS
        +NN G+FGDTTLTKVFVGGLAWETPKEAMRDHFE+FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    ++
Subjt:  SNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPAS

Query:  APPPPPPPQPGSNGGGPRTTS--AAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMYP
        +  PP  PQPGSNGGGPRTTS  A  GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GYMNGHYTQMYPGQAMVGANTLMPMYP
Subjt:  APPPPPPPQPGSNGGGPRTTS--AAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMYP

Query:  MYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNP
        +YHYHQSHAMGMPAHIFPPSPT AGPF  +PP+S++SKPASVGPNP
Subjt:  MYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein1.9e-11885.08Show/hide
Query:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA
        +S N G+FGDTTLTKVFVGGLAWETPKEAMRDHF +FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    +
Subjt:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA

Query:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMY
        ++  PP  PQPGSN GGPRTTSA  A GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GYMNGHYTQMYPGQAMVGANTLMPMY
Subjt:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMY

Query:  PMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG
        P+YHYHQSHAMGMPAHIFPPSPT AGPF  +PP S++SKP +VGPNPG
Subjt:  PMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X18.0e-11783.94Show/hide
Query:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA
        ++ N G+FGDTTLTKVFVGGLAWETPKEAMRDHF++FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    +
Subjt:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA

Query:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQ-AMVGANTLMPM
        ++  PP  PQPGSNGGGPRTT+A  A GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GY+NGHYTQMYPGQ AMVGANTLMPM
Subjt:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQ-AMVGANTLMPM

Query:  YPMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG
        YP+YHYHQSHAMGMPAHIFPPSPT AGPF  +PP S++SKP +VGPNPG
Subjt:  YPMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X17.3e-11883Show/hide
Query:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA
        ++ N G+FGDTTLTKVFVGGLAWETPKEAMRDHF++FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR    +
Subjt:  ASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPA

Query:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQ-AMVGANTLMPM
        ++  PP  PQPGSNGGGPRTT+A  A GNHVQWYYPAGTHPTPFHHQPHQ VPFYGY PSPTYIATDI YN K+GY+NGHYTQMYPGQ AMVG NTLMPM
Subjt:  SAPPPPPPPQPGSNGGGPRTTSA--AHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQ-AMVGANTLMPM

Query:  YPMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPGPFLS
        YP+YHYHQSHAMGMPAHIFPPSPT AGPF  +PP S++SKP +VGPNPGPF +
Subjt:  YPMYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPGPFLS

A0A6J1FUE8 probable RNA-binding protein ARP1 isoform X13.1e-11685.02Show/hide
Query:  MASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRP
        M++NN G+FGDTTLTKVFVGGLAWETPKEAMRDHFE+FGEILEAVIISDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR SR 
Subjt:  MASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRP

Query:  ASAPPPPPPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMYP
        ASA PP  P  PGSNGGGPRTTSA  GNHVQWYYPAGT+PT F HQPHQ VPFYGY PSPTYIATDI YN KVGYMNGHY Q+YPGQAMVGANTLMPMYP
Subjt:  ASAPPPPPPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMYP

Query:  MYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG
        +YHYHQSHAMGMPAHI+PPSPTAA     +PP+S++SKPASV P PG
Subjt:  MYHYHQSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPG

A0A6J1H1A2 probable RNA-binding protein ARP1 isoform X43.1e-11688.11Show/hide
Query:  VFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAPPPP
        +FGDTTLTKVFVGGLAWETPKEAMRDHFE+FG+ILEAVII+DKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARR+SR ASA  PP
Subjt:  VFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAPPPP

Query:  PPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYN-QKVGYMN-GHYTQMYPGQAMVGANTLMPMYPMYHYH
          PQPGSNGG PRTTSAA GNHVQWYYPAGTHPT FHHQPHQ VPFYGY PSPTYIATDI YN QKVGYMN G Y Q+YPGQAMVGANTLMPMYP+YHYH
Subjt:  PPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYN-QKVGYMN-GHYTQMYPGQAMVGANTLMPMYPMYHYH

Query:  QSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPGPF
        QS AMGMPAHIFPPSPTAAGPF  +PP S++SKPASVGPNPGPF
Subjt:  QSHAMGMPAHIFPPSPTAAGPFTPLPPASMISKPASVGPNPGPF

SwissProt top hitse value%identityAlignment
Q62176 RNA-binding protein 381.2e-2155.68Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  +  +A +AC+D  PII+GR+AN NLA LGA+  S
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS

Q6GQD3 RNA-binding protein 24-A1.6e-2154.26Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR-RASRPASA
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  +  +A++AC+D  PII+GR+AN NLA LGA+ R  +P  A
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR-RASRPASA

Q9BX46 RNA-binding protein 249.4e-2255.32Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR-RASRPASA
        DTT TK+FVGGL + T   ++R +FE FGEI EAV+I+D+ TG+S+GYGFVT  +  +A++AC+D  PII+GR+AN NLA LGA+ R  +P  A
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGAR-RASRPASA

Q9H0Z9 RNA-binding protein 387.2e-2255.68Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS
        DTT TK+FVGGL + T   ++R +FE FG+I EAV+I+D+ TG+S+GYGFVT  +  +A++AC+D  PII+GR+AN NLA LGA+  S
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS

Q9M1S3 Probable RNA-binding protein ARP13.7e-5853.5Show/hide
Query:  MSMASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS
        M+ ++N  G FGDT LTKVFVGGLAW+T KEAM DHF ++G+ILEAVIISDKLT RSKGYGFVTFK+A++A +ACEDS PIINGRRANCNLASLG R   
Subjt:  MSMASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS

Query:  RPASAPPPPPPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVG-----YMNGHYTQMYP--------
         P    P   P        G R T    GNH QWYYP+G        Q HQ VPFYGYP +  Y+A ++ +NQKVG     YMNG+Y QM P        
Subjt:  RPASAPPPPPPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVG-----YMNGHYTQMYP--------

Query:  ----------GQAMVG-ANTLMPMYPMYHYHQSHAMGMPAHIF
                  G+ MVG A+ ++P Y +Y YHQS A+G P   F
Subjt:  ----------GQAMVG-ANTLMPMYPMYHYHQSHAMGMPAHIF

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-3742.08Show/hide
Query:  GGV-FGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAP
        GG+  GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF+EAE+A+ AC D+ P+I+GRRANCNLASLG +R+       
Subjt:  GGV-FGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAP

Query:  PPPPPPQPGSNGGGPRTTSAAHGNHVQWYY--PAGTHPTPFHHQPHQTVPFYGYPP-SPTYIATDIGYNQKVGYMNGHYTQMY------PGQAMVGANTL
            P  P   GGG         + +Q  +  P    P  F H PH  +  +GY P SP Y +         G  +G    +Y       G     A + 
Subjt:  PPPPPPQPGSNGGGPRTTSAAHGNHVQWYY--PAGTHPTPFHHQPHQTVPFYGYPP-SPTYIATDIGYNQKVGYMNGHYTQMY------PGQAMVGANTL

Query:  MPMY---------------PMYHYHQSHAMGMPAHIFPPS
         P Y               P YH+  S+    P H  PP+
Subjt:  MPMY---------------PMYHYHQSHAMGMPAHIFPPS

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-3742.08Show/hide
Query:  GGV-FGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAP
        GG+  GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF+EAE+A+ AC D+ P+I+GRRANCNLASLG +R+       
Subjt:  GGV-FGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAP

Query:  PPPPPPQPGSNGGGPRTTSAAHGNHVQWYY--PAGTHPTPFHHQPHQTVPFYGYPP-SPTYIATDIGYNQKVGYMNGHYTQMY------PGQAMVGANTL
            P  P   GGG         + +Q  +  P    P  F H PH  +  +GY P SP Y +         G  +G    +Y       G     A + 
Subjt:  PPPPPPQPGSNGGGPRTTSAAHGNHVQWYY--PAGTHPTPFHHQPHQTVPFYGYPP-SPTYIATDIGYNQKVGYMNGHYTQMY------PGQAMVGANTL

Query:  MPMY---------------PMYHYHQSHAMGMPAHIFPPS
         P Y               P YH+  S+    P H  PP+
Subjt:  MPMY---------------PMYHYHQSHAMGMPAHIFPPS

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-3742.08Show/hide
Query:  GGV-FGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAP
        GG+  GDTT TKVFVGGLAWET KE M+ HFE+FGEILEAV+I+DK +GRSKGYGFVTF+EAE+A+ AC D+ P+I+GRRANCNLASLG +R+       
Subjt:  GGV-FGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAP

Query:  PPPPPPQPGSNGGGPRTTSAAHGNHVQWYY--PAGTHPTPFHHQPHQTVPFYGYPP-SPTYIATDIGYNQKVGYMNGHYTQMY------PGQAMVGANTL
            P  P   GGG         + +Q  +  P    P  F H PH  +  +GY P SP Y +         G  +G    +Y       G     A + 
Subjt:  PPPPPPQPGSNGGGPRTTSAAHGNHVQWYY--PAGTHPTPFHHQPHQTVPFYGYPP-SPTYIATDIGYNQKVGYMNGHYTQMY------PGQAMVGANTL

Query:  MPMY---------------PMYHYHQSHAMGMPAHIFPPS
         P Y               P YH+  S+    P H  PP+
Subjt:  MPMY---------------PMYHYHQSHAMGMPAHIFPPS

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-5953.5Show/hide
Query:  MSMASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS
        M+ ++N  G FGDT LTKVFVGGLAW+T KEAM DHF ++G+ILEAVIISDKLT RSKGYGFVTFK+A++A +ACEDS PIINGRRANCNLASLG R   
Subjt:  MSMASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRAS

Query:  RPASAPPPPPPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVG-----YMNGHYTQMYP--------
         P    P   P        G R T    GNH QWYYP+G        Q HQ VPFYGYP +  Y+A ++ +NQKVG     YMNG+Y QM P        
Subjt:  RPASAPPPPPPPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVG-----YMNGHYTQMYP--------

Query:  ----------GQAMVG-ANTLMPMYPMYHYHQSHAMGMPAHIF
                  G+ MVG A+ ++P Y +Y YHQS A+G P   F
Subjt:  ----------GQAMVG-ANTLMPMYPMYHYHQSHAMGMPAHIF

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.2e-4550.71Show/hide
Query:  MRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAPPPPPPPQPGSNGGGPRTTSAAHGNHV
        M DHF ++G+ILEAVIISDKLT RSKGYGFVTFK+A++A +ACEDS PIINGRRANCNLASLG R   RP +               G R T    GNH 
Subjt:  MRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAPPPPPPPQPGSNGGGPRTTSAAHGNHV

Query:  QWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPMYHYHQ
        QWYYP+G        Q HQ VPFYGYP +  Y+A ++ +NQKVG     YMNG+Y QM P                  G+ MVG A+ ++P Y +Y YHQ
Subjt:  QWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPMYHYHQ

Query:  SHAMGMPAHIF
        S A+G P   F
Subjt:  SHAMGMPAHIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGGCGAGCAACAACGGAGGTGTGTTTGGGGACACGACGTTGACCAAGGTCTTCGTCGGAGGCCTGGCGTGGGAGACTCCGAAGGAGGCCATGAGAGACCACTT
CGAGAGGTTCGGCGAGATCCTGGAGGCGGTGATCATCTCCGATAAGCTCACCGGCAGATCCAAGGGCTACGGATTCGTCACGTTTAAGGAGGCGGAATCGGCGAAGAAGG
CTTGCGAGGATTCGGCTCCGATCATCAATGGCCGCCGCGCCAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGCCTCTAGGCCGGCTTCGGCTCCTCCTCCTCCTCCT
CCTCCTCAGCCTGGATCGAACGGCGGTGGACCGAGGACGACGTCAGCAGCACACGGTAACCACGTGCAGTGGTACTACCCGGCAGGGACTCATCCGACGCCGTTTCATCA
TCAGCCTCACCAAACCGTTCCTTTTTATGGATACCCTCCAAGCCCCACTTACATAGCTACCGATATCGGTTACAACCAAAAAGTAGGCTACATGAACGGGCACTACACAC
AGATGTATCCAGGGCAGGCAATGGTAGGAGCGAACACATTGATGCCGATGTACCCGATGTATCATTACCATCAATCACATGCCATGGGGATGCCGGCCCACATATTCCCT
CCCAGCCCCACGGCGGCCGGTCCGTTCACACCGCTCCCACCCGCTTCCATGATCTCCAAACCGGCCTCCGTTGGCCCCAACCCAGGTCCCTTCCTTTCTCTTCACCCATT
TTTATCTATATTCTCCGCAATCACATTTTCGGGTGGACGATAA
mRNA sequenceShow/hide mRNA sequence
CTATCTGTCAGCCTCTCTGTCTCTCTGTCTTCTTCAATTTCTTTATTCCCATAACCCACTCTGTTCTTCACACTCAATTCCTTTATATATATATATATATAATCTTTTTT
TCTTCCATTTCTCACTTCTTCAATTTCTGCTGCTTTGATTTCGGAGGAAAACACAGAGTCGCCGGAATGTCGATGGCGAGCAACAACGGAGGTGTGTTTGGGGACACGAC
GTTGACCAAGGTCTTCGTCGGAGGCCTGGCGTGGGAGACTCCGAAGGAGGCCATGAGAGACCACTTCGAGAGGTTCGGCGAGATCCTGGAGGCGGTGATCATCTCCGATA
AGCTCACCGGCAGATCCAAGGGCTACGGATTCGTCACGTTTAAGGAGGCGGAATCGGCGAAGAAGGCTTGCGAGGATTCGGCTCCGATCATCAATGGCCGCCGCGCCAAC
TGTAATCTGGCTTCGCTTGGAGCTCGGCGCGCCTCTAGGCCGGCTTCGGCTCCTCCTCCTCCTCCTCCTCCTCAGCCTGGATCGAACGGCGGTGGACCGAGGACGACGTC
AGCAGCACACGGTAACCACGTGCAGTGGTACTACCCGGCAGGGACTCATCCGACGCCGTTTCATCATCAGCCTCACCAAACCGTTCCTTTTTATGGATACCCTCCAAGCC
CCACTTACATAGCTACCGATATCGGTTACAACCAAAAAGTAGGCTACATGAACGGGCACTACACACAGATGTATCCAGGGCAGGCAATGGTAGGAGCGAACACATTGATG
CCGATGTACCCGATGTATCATTACCATCAATCACATGCCATGGGGATGCCGGCCCACATATTCCCTCCCAGCCCCACGGCGGCCGGTCCGTTCACACCGCTCCCACCCGC
TTCCATGATCTCCAAACCGGCCTCCGTTGGCCCCAACCCAGGTCCCTTCCTTTCTCTTCACCCATTTTTATCTATATTCTCCGCAATCACATTTTCGGGTGGACGATAAA
AAAACAGACCACCTAATCTAAACCTTAATAGTGGTCATAATTCTCTTTGAGGTTGGTTAGGGCAAGAAAATGTGTAATTAACGAGTTTGGTTTTCAGGGTTGGCCAACTT
TTAGCTGAGTTTAACATAACTTACCTCGTACTAAGAATTTATGGTAACATATTGATAGAGAGCATGCAGTAATAAGATAAACCGACAAATCTGAACAATAGAGGTTAGAT
TCAAAAAGTTACTTTTAACCTAACTTCAACCTACATTGAAGCTGTATTGTTATGTACACCCCCCCCATACATTCCCTTTTCCCCTTTCCTATGTTGGGTTGTGCTTTGTT
TTTTGTGATGAGCTAAGATAGGACTTGTAGCCTTTTGCCCATTGTTTTGCTTTGCATGTTCCCAAACAAAAACAAATACGGTCAAGTCAATAGTCAAACGTTATTAACAA
GGGAAAAACAAAAAAACAGATCAGAGCCCTTCACGTGAAAGGGTTATTTTTTTAGTAAAGGGGTTTTCCATTCCTCCCCCACTGCCAGCTGGCCTCCCTGGTCCCACGTG
GCCAGCTTCCTCTGCTTGCTGTCCGGTCCCTTTCCAGTTGTTAATATTCCCTAATGTCAAGGACTCTTTTGCAAATTCTACTACTTTTCTACATTGTTAACACAAAGAAT
CAAATCTTTTCTAGTTTCATAATGTTGTTCTACTAGGATTACATAATAGTTCCAAGTTTATATTGTTTTCAAGGGGCGACACAATAATTGAAGACTTGGTTTTGAGGGTA
TACTCCCCTTAAAGTCCTAAGTTCGAGACTCATTTGTGACATTACTCCTTCAATGTCTTCAGAGCCTGACCTAAGGACCGGCGTGACTACCTTTGTTTTAAAATATAGTT
CATGCTTATATTCTATATAAAATCTCACATTTAACTCACAACACTTATATGACATAGGAGTGATTTTGATTAATAACTCTTTAGCTCCTAAAATTCATGTGAGTAGAAGA
GAAATCATCTTTTTAGGGGATATAGTGATCAAAATTTTCACATATAAATGAGCTATTTCTCTTTTTTGTCAATTAATTTTGAGATTTAACCCATATTTACCTAATAACTT
TGGTTGAGTACATGTACTGAAAGGCTTGTAAGTTTTCTCGAGTATACCTATAAAAGAACCATCATAGGTTTACCCTAAGTTCAATATTCATGGTGATTATCTAATTTTAT
ATATAGATTTTCTTGACGGTTGTGAAATATTGTAAGGTCAAACGATTAATCTCGTGATAATAGTTGAGGTGTGCGTAACGTTATCTAAAAACCCACCCACTCATTAAAAA
AAATGTATAAAAGACTTATAAGTTTTAGATCTAGTAACCATTTTTACATGGTGGGTTATACATAGCACAAAAGATCAGATTCATCATTTGAATTTCTGTTTTGGGTTCTT
TTTTTTTTTTTCTCTCTAACTTAACTGCATTTCTGTGTATATGATGAATTTATGAATTATATAGAATGAGTTAGAATTGAATGATGATAATTAAACTGATATTACAAAGA
ACAGTTTGCTTGGTTGTGGAATAATAGGTAATACAGTTGGAGGAGGATGCAAGGGAAGAAGATGATGATGATGATGGTAAAAGAAGAGCAAAGAAGAATTAAATATAAAA
AGGGACAGGCAGGCAGGCAGGCTAAGAGGGACCCTATTTTATTTTATTTTTTTTAATCTGAACAACTCATTCTCTCTCAGTACATGCAGGC
Protein sequenceShow/hide protein sequence
MSMASNNGGVFGDTTLTKVFVGGLAWETPKEAMRDHFERFGEILEAVIISDKLTGRSKGYGFVTFKEAESAKKACEDSAPIINGRRANCNLASLGARRASRPASAPPPPP
PPQPGSNGGGPRTTSAAHGNHVQWYYPAGTHPTPFHHQPHQTVPFYGYPPSPTYIATDIGYNQKVGYMNGHYTQMYPGQAMVGANTLMPMYPMYHYHQSHAMGMPAHIFP
PSPTAAGPFTPLPPASMISKPASVGPNPGPFLSLHPFLSIFSAITFSGGR