CuGenDBv2

Gene ID	Sed0004220
Organism	Sechium edule (Chayote v1)
Description	protein XRI1-like
Genome location	LG01:70567700..70571377
RNA-Seq Expression	Sed0004220
Synteny	Sed0004220
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0007143 - female meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010165 - response to X-ray (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR039933 - Protein XRI1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7036253.1 Protein XRI1 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-151

87.38

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Query:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK
        +DSWNW+GDGYTIQKDTDL+CLWDG SENDDLSYVFDETTPVKACGDLAYHVT++DDRNKKSEESRET SQAKRRRMLQFTAQD+E S CC+DLSS+FLK
Subjt:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK

Query:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVS-------EFCNVAPELKSNAVQHHPT
        SHNKD+SSPA +P+V YEIPECSG S NVPT C ENLDHSPEGWIA+CLNDADMHCSPEDLNFA TSD Q DVS       EFCNVAPE KSNAVQHHPT
Subjt:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVS-------EFCNVAPELKSNAVQHHPT

Query:  RTPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR
        R PRNIIFKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR
Subjt:  RTPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR

Query:  G
        G
Subjt:  G

XP_004144384.1 protein XRI1 [Cucumis sativus]

1.4e-145

86.2

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Query:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ
        +D+WNWEGDGYTIQKDTD+   +CLWDG SEN DLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRET SQAKRRRMLQFTAQD+E S C +DLSS+
Subjt:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ

Query:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR
        FLKSHNK +SSPA L EVSY IPECSG +DNV   CHENLDHSPEGWIAECLNDADMHCSPEDL+FA TSDIQ DVSEFC+ APE KSN VQHHPTR P 
Subjt:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR

Query:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        NIIFKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

XP_022159878.1 protein XRI1 [Momordica charantia]

8.0e-146

85.86

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Query:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ
        +D+W+W+GDGY IQKD DL   + +WDG SENDDLSYV DETTPVKACGDLAYHV YSD RNKKSEESRET SQAKRRRMLQF AQDM  S C +DLSS+
Subjt:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ

Query:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR
        FLKS NKD+SSPA LPEV Y IPECSG SDNVP  CHENLDHSPEGWI+EC NDADMHCSPEDLNFA TSDIQ DVSEFC+V PELKSNAVQHHPTR PR
Subjt:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR

Query:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        NIIFKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHP+DPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

XP_022930895.1 protein XRI1-like [Cucurbita moschata]

1.4e-153

89.46

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Query:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK
        +DSWNW+GDGYTIQKDTDL+CLWDG SENDDLSYVFDETTPVKACGDLAYHVT++DDRNKKSEESRET SQAKRRRMLQFTAQD+E S CC+DLSS+FLK
Subjt:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK

Query:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII
        SHNKD+SSPA +P+V YEIPECSG S NVPT C ENLDHSPEGWIA+CLNDADMHCSPEDLNFA TSD Q DVSEFCNVAPE KSNAVQHHPTR PRNII
Subjt:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII

Query:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        FKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

XP_022995967.1 protein XRI1-like [Cucurbita maxima]

2.0e-152

89.12

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Query:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK
        +DSWNW+GDGYTIQKDTDL+CLWDG SENDDLSYVFDETTPVKACGDLAYHVT++DD NKKSEESRET SQAKRRRMLQFTAQD+E S CC+DLSS+FLK
Subjt:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK

Query:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII
        SHNKD+SSPA LP+V YEIPECSG S NVPT C ENLDHSPEGWIA+CLNDADMHCSPEDLNFA TSD Q DVSEFCNVAPE KSNAVQHHPTR PRNII
Subjt:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII

Query:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        FKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPSQSYPTSAFSGKPVVGKTKIHTEG KGSITIMRTRG
Subjt:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBN6 Uncharacterized protein

6.6e-146

86.2

Show/hide

Query:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ
        +D+WNWEGDGYTIQKDTD+   +CLWDG SEN DLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRET SQAKRRRMLQFTAQD+E S C +DLSS+
Subjt:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ

Query:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR
        FLKSHNK +SSPA L EVSY IPECSG +DNV   CHENLDHSPEGWIAECLNDADMHCSPEDL+FA TSDIQ DVSEFC+ APE KSN VQHHPTR P 
Subjt:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR

Query:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        NIIFKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

A0A5A7SGS7 Protein XRI1 isoform X1

8.7e-146

86.53

Show/hide

Query:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ
        SD+WNWEGDGYTIQKDTD+   +CLWDG SEN DLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRET SQAKRRRMLQFTAQD+E S C +DLSS+
Subjt:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ

Query:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR
        FLKSHNKD+SS A L EVSY IPECSG +DNV   CHENLDHSPEGWIAECLNDADMHCSPEDL FA TSDIQ DVSEFC+ APE KSN V HHPTR P 
Subjt:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR

Query:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        NIIFKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

A0A6J1E034 protein XRI1

3.9e-146

85.86

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Query:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ
        +D+W+W+GDGY IQKD DL   + +WDG SENDDLSYV DETTPVKACGDLAYHV YSD RNKKSEESRET SQAKRRRMLQF AQDM  S C +DLSS+
Subjt:  SDSWNWEGDGYTIQKDTDL---DCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQ

Query:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR
        FLKS NKD+SSPA LPEV Y IPECSG SDNVP  CHENLDHSPEGWI+EC NDADMHCSPEDLNFA TSDIQ DVSEFC+V PELKSNAVQHHPTR PR
Subjt:  FLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPR

Query:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        NIIFKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHP+DPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  NIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

A0A6J1EY26 protein XRI1-like

6.6e-154

89.46

Show/hide

Query:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK
        +DSWNW+GDGYTIQKDTDL+CLWDG SENDDLSYVFDETTPVKACGDLAYHVT++DDRNKKSEESRET SQAKRRRMLQFTAQD+E S CC+DLSS+FLK
Subjt:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK

Query:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII
        SHNKD+SSPA +P+V YEIPECSG S NVPT C ENLDHSPEGWIA+CLNDADMHCSPEDLNFA TSD Q DVSEFCNVAPE KSNAVQHHPTR PRNII
Subjt:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII

Query:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        FKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
Subjt:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

A0A6J1K0G1 protein XRI1-like

9.6e-153

89.12

Show/hide

Query:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK
        +DSWNW+GDGYTIQKDTDL+CLWDG SENDDLSYVFDETTPVKACGDLAYHVT++DD NKKSEESRET SQAKRRRMLQFTAQD+E S CC+DLSS+FLK
Subjt:  SDSWNWEGDGYTIQKDTDLDCLWDGASENDDLSYVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLK

Query:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII
        SHNKD+SSPA LP+V YEIPECSG S NVPT C ENLDHSPEGWIA+CLNDADMHCSPEDLNFA TSD Q DVSEFCNVAPE KSNAVQHHPTR PRNII
Subjt:  SHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNII

Query:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        FKGRKSYIR PTKL SSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH P+DPSQSYPTSAFSGKPVVGKTKIHTEG KGSITIMRTRG
Subjt:  FKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

SwissProt top hits

e value

%identity

Alignment

Q6NLW5 Protein XRI1

5.3e-68

52.33

Show/hide

Query:  SDSWNWEGDGYTIQKDTDL----DCLWDGASEN-DDLSYVF-DETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDL
        S SWNW+ D Y  Q  +      DC     + N +D SY+F DE TPVKAC +L YHVT ++D N+K E   ET+S  KRRRMLQF  Q  E S    + 
Subjt:  SDSWNWEGDGYTIQKDTDL----DCLWDGASEN-DDLSYVF-DETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDL

Query:  SSQFLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTR
         S  LKS  +D +    LPE S  I    G S++      E LD   E W A+CLNDA+    P+DLNF  + D+Q D+SE+ NV PE ++  VQ   TR
Subjt:  SSQFLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTR

Query:  TPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        +  N+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K H ++P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  TPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Arabidopsis top hits

e value

%identity

Alignment

AT5G48720.1 x-ray induced transcript 1

4.3e-65

54.89

Show/hide

Query:  DDLSYVF-DETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLKSHNKDISSPATLPEVSYEIPECSGNSDN
        +D SY+F DE TPVKAC +L YHVT ++D N+K E   ET+S  KRRRMLQF  Q  E S    +  S  LKS  +D +    LPE S  I    G S++
Subjt:  DDLSYVF-DETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLKSHNKDISSPATLPEVSYEIPECSGNSDN

Query:  VPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPC
              E LD   E W A+CLNDA+    P+DLNF  + D+Q D+SE+ NV PE ++  VQ   TR+  N+IFKGRKS+ R  +KL SS+ YPFAFIKPC
Subjt:  VPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPC

Query:  GFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        G HG +TLKDINQ+IR  PP+K K H ++P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  GFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

AT5G48720.2 x-ray induced transcript 1

3.8e-69

52.33

Show/hide

Query:  SDSWNWEGDGYTIQKDTDL----DCLWDGASEN-DDLSYVF-DETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDL
        S SWNW+ D Y  Q  +      DC     + N +D SY+F DE TPVKAC +L YHVT ++D N+K E   ET+S  KRRRMLQF  Q  E S    + 
Subjt:  SDSWNWEGDGYTIQKDTDL----DCLWDGASEN-DDLSYVF-DETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDL

Query:  SSQFLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTR
         S  LKS  +D +    LPE S  I    G S++      E LD   E W A+CLNDA+    P+DLNF  + D+Q D+SE+ NV PE ++  VQ   TR
Subjt:  SSQFLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEGWIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTR

Query:  TPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        +  N+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K H ++P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  TPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHHPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGTTTGTAGTGTTCTTGCAGTCTTGTCTTGTCTTTGGATCCCAATTGTTTACAGATAAATTGTTGTTGTTTTGTTCTTTTGTTGAGAAAATCCTCCCACTTCTTAA
TAAGGGTGATTTAGTTTGGTCTTCTTGTAGTTTGACTTGCTTATATGATTTTGAACCAAATTGTTTTCAATTTCCTTTTGGTATAAGCGATGTTTTTGTTGCTTTAATGT
GTGATTTTATCAGCGATTCTTGGAATTGGGAAGGAGATGGATATACCATTCAGAAGGATACCGATTTAGACTGCCTTTGGGACGGGGCGTCTGAAAATGACGACCTTTCG
TATGTGTTCGATGAAACAACTCCAGTTAAGGCTTGCGGGGACTTGGCTTACCATGTCACATATAGTGATGACAGGAACAAGAAATCAGAAGAATCCAGGGAGACTCAATC
ACAAGCAAAGAGACGACGGATGTTACAGTTTACAGCACAAGATATGGAAAATTCTCCCTGCTGTCAAGATTTGTCTTCTCAATTTCTTAAATCACATAATAAGGACATTT
CCAGTCCAGCTACTCTCCCTGAAGTTTCGTATGAGATTCCTGAATGCTCTGGAAACTCAGATAATGTGCCCACTTTTTGTCACGAGAATTTGGATCACTCACCTGAAGGT
TGGATTGCTGAATGCCTAAATGATGCTGATATGCATTGTAGCCCGGAAGATTTGAACTTTGCTGAGACTTCGGACATTCAAACCGATGTATCAGAGTTTTGTAATGTTGC
ACCTGAGTTAAAATCTAATGCAGTTCAACATCATCCTACTCGAACTCCTCGGAACATAATATTTAAAGGTCGAAAGTCGTATATTAGAGCTCCCACAAAATTGGTTTCCT
CAGTTGCCTACCCATTTGCCTTCATCAAACCATGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGATTCGCACACCTCCACCTTCAAAATTGAAGCAT
CACCCCGACGACCCATCTCAATCGTACCCGACATCAGCTTTCTCTGGAAAGCCCGTCGTTGGTAAAACAAAGATTCATACTGAAGGCGGAAAAGGCAGCATCACAATCAT
GAGGACCAGAGGTTGA

mRNA sequence

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AAAAAAGATCAAAGCGTGGTTTAGTGACCACTTTTCTCCTCTTCAATCCACAACCCAACATTCAGCGACTGAACTCGGTCTCTCTTCAATCGCCTCTTTTTCGATCGCAG
TCAAGAACAATTCAACAAGGCCGCTCTTCTTTCACTGTTTCAACCATGGATGATTCCGCCAAAAACAAGTAAAATCATCGCCCTCAACCTCCTGCTATTTCTGTTAGTTT
CTCTGATTGATTTTGGTTTCTGTAAGTTTCTTTTGCGATTTTCTGAAATCGGTCTTTTGTGGAAGATCTAGTGGCGATTCTTGTTGATTTCGTATCTGGGGTAAGCTGTT
TTTGGGTTTTGTTTCAGATGGGTGTGGATAGTTTTGAGTGTTTGTTGTGTTGGATTATGTTGATTCTTTGATTTTACATGTTTTTGTTGCTATGTTCTTGTTGATTTGAA
GCTGAAATTGGAAAGAGGATGTGGCTGTTGGATCTAATTTAAGTAGTGGGTCATTGCATTATTGTTTCTTTTGTGTGTTTTTTTTTTGGTTTGTTTGTGTTTGACTAATT
GTTTTGTCACCAATGTACTATACCATTGGGAGCTGATGATTCGTTATGTTGTTTGTAGTGTTCTTGCAGTCTTGTCTTGTCTTTGGATCCCAATTGTTTACAGATAAATT
GTTGTTGTTTTGTTCTTTTGTTGAGAAAATCCTCCCACTTCTTAATAAGGGTGATTTAGTTTGGTCTTCTTGTAGTTTGACTTGCTTATATGATTTTGAACCAAATTGTT
TTCAATTTCCTTTTGGTATAAGCGATGTTTTTGTTGCTTTAATGTGTGATTTTATCAGCGATTCTTGGAATTGGGAAGGAGATGGATATACCATTCAGAAGGATACCGAT
TTAGACTGCCTTTGGGACGGGGCGTCTGAAAATGACGACCTTTCGTATGTGTTCGATGAAACAACTCCAGTTAAGGCTTGCGGGGACTTGGCTTACCATGTCACATATAG
TGATGACAGGAACAAGAAATCAGAAGAATCCAGGGAGACTCAATCACAAGCAAAGAGACGACGGATGTTACAGTTTACAGCACAAGATATGGAAAATTCTCCCTGCTGTC
AAGATTTGTCTTCTCAATTTCTTAAATCACATAATAAGGACATTTCCAGTCCAGCTACTCTCCCTGAAGTTTCGTATGAGATTCCTGAATGCTCTGGAAACTCAGATAAT
GTGCCCACTTTTTGTCACGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGAATGCCTAAATGATGCTGATATGCATTGTAGCCCGGAAGATTTGAACTTTGCTGA
GACTTCGGACATTCAAACCGATGTATCAGAGTTTTGTAATGTTGCACCTGAGTTAAAATCTAATGCAGTTCAACATCATCCTACTCGAACTCCTCGGAACATAATATTTA
AAGGTCGAAAGTCGTATATTAGAGCTCCCACAAAATTGGTTTCCTCAGTTGCCTACCCATTTGCCTTCATCAAACCATGTGGATTCCATGGAGATGTCACCTTGAAGGAC
ATAAACCAGCGGATTCGCACACCTCCACCTTCAAAATTGAAGCATCACCCCGACGACCCATCTCAATCGTACCCGACATCAGCTTTCTCTGGAAAGCCCGTCGTTGGTAA
AACAAAGATTCATACTGAAGGCGGAAAAGGCAGCATCACAATCATGAGGACCAGAGGTTGAATGAGCGATGGATAACGGTTCTCGCTATTCAGTCTTTCCATTTTGGAGC
CCGTCAGTCTACCCTTGAGGGATTTGTAAAATGTCAGGGCCATCTAAGTATTACAGAAGCTGATTAATTTCCATTATTTGTGGGGATAGATATATATATAGAGGGATGGA
CAGGATTATTAGAGTTGCCCTTGGAATCCTTAATCATATAACTGCACAAGTGTGTGTATACTTCCAAGTGATTGTAGGTTAAAATTTATGTGACCTTTTTTAGACTTGAA
AACACTCCTTATCATTATGTTTACTATCAAATCATCCTATTCCTTGTGCCTTGTGAAACTCTTAATGCTTTTGTTGTAAAGCTTAAAAG

Protein sequence

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MLFVVFLQSCLVFGSQLFTDKLLLFCSFVEKILPLLNKGDLVWSSCSLTCLYDFEPNCFQFPFGISDVFVALMCDFISDSWNWEGDGYTIQKDTDLDCLWDGASENDDLS
YVFDETTPVKACGDLAYHVTYSDDRNKKSEESRETQSQAKRRRMLQFTAQDMENSPCCQDLSSQFLKSHNKDISSPATLPEVSYEIPECSGNSDNVPTFCHENLDHSPEG
WIAECLNDADMHCSPEDLNFAETSDIQTDVSEFCNVAPELKSNAVQHHPTRTPRNIIFKGRKSYIRAPTKLVSSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKH
HPDDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Sed0004220 (gene) of Chayote v1 genome