; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004255 (gene) of Chayote v1 genome

Gene IDSed0004255
OrganismSechium edule (Chayote v1)
DescriptionFAR1 domain-containing protein
Genome locationLG09:33692534..33696407
RNA-Seq ExpressionSed0004255
SyntenySed0004255
Gene Ontology termsNA
InterPro domainsIPR004330 - FAR1 DNA binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014556.1 Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5281.25Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        +E +A AT+I DTEPYVGMEFE EESAKVFYD YASR GF++RVDAFRRSM +G+VVWRRLVCNKEGFRK RPKR+ENRK RA+TREGC AMVVVKK+KT
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKW+VTKFVKDHNHPLIV  AS+RRNVL
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

XP_008447236.1 PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Cucumis melo]2.0e-5282.03Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        TE +AI +++ DTEP+VGMEFE EES KVFYD YASR GFIMRVDAFRRSM +GAVVWRRLVCNKEGFRK +PKR+ENRK RAVTREGC AMVVVKK+KT
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKWVVTKFVKDHNHPLIV  AS+RRNVL
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

XP_022991203.1 protein FAR1-RELATED SEQUENCE 5 [Cucurbita maxima]3.1e-5382.03Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        +E +AIAT+I DTEPYVGMEFE EESAKVFYD YASR GFI+RVDAFRRSM +G+VVWRRLVCNKEGFRK RPKR+ENRK RA+TREGC AMVVVKK+KT
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKW+VTKFVKDHNHPLIV  AS+RRN+L
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

XP_023547555.1 protein FAR1-RELATED SEQUENCE 5 [Cucurbita pepo subsp. pepo]6.8e-5382.03Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        +E +AIAT+I DTEPYVGMEFE EESAKVFYD YASR GFI+RVDAFRRSM +G+VVWRRLVCNKEGFRK RPKR+ENRK RA+TREGC AMVVVKK+K+
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKW+VTKFVKDHNHPLIV  AS+RRNVL
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

XP_038897039.1 protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida]5.2e-5384.25Show/hide
Query:  ETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTG
        E +AIAT+  DTEP+VGMEFE EESAKVFYD YASR GFIMRVDAFRRSM +GAVVWRRLVCNKEGFRKLRPKR+ENRK RA+TREGC AMVVVKKDK+G
Subjt:  ETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTG

Query:  KWVVTKFVKDHNHPLIVASASSRRNVL
        KWVVTKFVKDHNHPLI+  AS+RRNVL
Subjt:  KWVVTKFVKDHNHPLIVASASSRRNVL

TrEMBL top hitse value%identityAlignment
A0A0A0KA59 FAR1 domain-containing protein3.6e-5282.03Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        TE +AI ++  DTEP+VGMEFE EES KVFYD YASR GFIMRVDAFRRSM +GAVVWRRLVCNKEGFRK +PKR+ENRK RAVTREGC AMVVVKK+KT
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKWVVTKFVKDHNHPLIV  AS+RRNVL
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

A0A1S3BGE3 protein FAR-RED IMPAIRED RESPONSE 1 isoform X19.6e-5382.03Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        TE +AI +++ DTEP+VGMEFE EES KVFYD YASR GFIMRVDAFRRSM +GAVVWRRLVCNKEGFRK +PKR+ENRK RAVTREGC AMVVVKK+KT
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKWVVTKFVKDHNHPLIV  AS+RRNVL
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

A0A5B7AXS9 FAR1 domain-containing protein4.2e-4880.34Show/hide
Query:  DTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKD
        D EPYVGMEFE EE+AKVFYD YA+R GF+MRVDAFRRSM +G VVWRRLVCNKEGFRKLRP+R+ENRK RAVTREGC AM+VVKK+KTGKWVVT+FVK+
Subjt:  DTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKD

Query:  HNHPLIVASASSRRNVL
        HNHPL+V  A+SRR+VL
Subjt:  HNHPLIVASASSRRNVL

A0A6J1GPB7 protein FAR1-RELATED SEQUENCE 51.6e-5280.47Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        +E +A AT+I DTEPYVGMEFE EESAKVFYD YASR GF++RVDAFRRSM +G+VVWRRLVCNKEGFRK RPKR+ENRK RA+TREGC AMVVVKK+K+
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKW+VTKFVKDHNHPLIV  AS+RRNVL
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

A0A6J1JVH7 protein FAR1-RELATED SEQUENCE 51.5e-5382.03Show/hide
Query:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT
        +E +AIAT+I DTEPYVGMEFE EESAKVFYD YASR GFI+RVDAFRRSM +G+VVWRRLVCNKEGFRK RPKR+ENRK RA+TREGC AMVVVKK+KT
Subjt:  TETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKT

Query:  GKWVVTKFVKDHNHPLIVASASSRRNVL
        GKW+VTKFVKDHNHPLIV  AS+RRN+L
Subjt:  GKWVVTKFVKDHNHPLIVASASSRRNVL

SwissProt top hitse value%identityAlignment
Q3E7I5 Protein FAR1-RELATED SEQUENCE 121.9e-1336.36Show/hide
Query:  ATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVT
        A ++  TEPY G+EF     A  FY  YA   GF +R+    RS  +G++  RR VC++EGF+               +R GC A + +K+  +G W+V 
Subjt:  ATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVT

Query:  KFVKDHNHPL
        +  KDHNH L
Subjt:  KFVKDHNHPL

Q5UBY2 Protein FAR1-RELATED SEQUENCE 15.1e-1132.52Show/hide
Query:  GMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRK-------------LRPKRNENRKARAVTREGCMAMVVVKKDKTGKWV
        G EFE +E A  FY  YA+  GF   + A RRS   G  +  + VC + G +K             +   R   R  R+ ++  C A + VK+ + G+WV
Subjt:  GMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRK-------------LRPKRNENRKARAVTREGCMAMVVVKKDKTGKWV

Query:  VTKFVKDHNHPLIVASASSRRNV
        V   VK+HNH +    A S R +
Subjt:  VTKFVKDHNHPLIVASASSRRNV

Q9M8J3 Protein FAR1-RELATED SEQUENCE 71.4e-1338.46Show/hide
Query:  TEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDH
        TEPY G+EF     A  FY  YA   GF +R+    RS  +G++  RR VC+KEGF+               +R GC A + +K+  +G W+V +  KDH
Subjt:  TEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDH

Query:  NHPL
        NH L
Subjt:  NHPL

Q9SWG3 Protein FAR-RED IMPAIRED RESPONSE 14.6e-1233.33Show/hide
Query:  LDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVK
        LD EP  G++F+  E+A +FY  YA   GF   +   RRS      +  +  C++ G          + +   V +  C A + VK+   GKW++ +FVK
Subjt:  LDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVK

Query:  DHNHPLIVASA
        DHNH L+ A A
Subjt:  DHNHPLIVASA

Q9SZL8 Protein FAR1-RELATED SEQUENCE 51.5e-2651.75Show/hide
Query:  ATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENR---KARAVTREGCMAMVVVKKDKTGKW
        A  +LD EPY G+EFE EE+AK FY+ YA R GF  RV + RRS  +GA++ R+ VC KEGFR +  KR ++R   + R +TR GC A + VK   +GKW
Subjt:  ATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENR---KARAVTREGCMAMVVVKKDKTGKW

Query:  VVTKFVKDHNHPLI
        +V+ FVKDHNH L+
Subjt:  VVTKFVKDHNHPLI

Arabidopsis top hitse value%identityAlignment
AT2G43280.1 Far-red impaired responsive (FAR1) family protein6.2e-2847.73Show/hide
Query:  DETPTETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGF-RKLRPKRNENRKARAVTREGCMAMVVV
        ++ PT   +  T     EP  G+ FE E++AK+FYD Y+ R GF+MRV + RRS  +G ++ RR  CNKEG    +R K    RK R  TREGC AM+ V
Subjt:  DETPTETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGF-RKLRPKRNENRKARAVTREGCMAMVVV

Query:  KKDKTGKWVVTKFVKDHNHPLIVASASSRRNV
        K D++GKWV+TKFVK+HNHPL+V+   +R  +
Subjt:  KKDKTGKWVVTKFVKDHNHPLIVASASSRRNV

AT3G07500.1 Far-red impaired responsive (FAR1) family protein1.2e-4268.14Show/hide
Query:  EPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDHN
        EP++GMEFE EE+AK FYD YA+  GF+MRVDAFRRSM +G VVWRRLVCNKEGFR+ RP+R+E+RK RA+TREGC A++VVK++K+G W+VTKF K+HN
Subjt:  EPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDHN

Query:  HPLIVASASSRRN
        HPL+  S + RRN
Subjt:  HPLIVASASSRRN

AT3G59470.1 Far-red impaired responsive (FAR1) family protein1.2e-2652.88Show/hide
Query:  EPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDHN
        EPYVG EFE E +A  FY+ YA++ GF++RV    RS  +G+ + R+LVCNKEG+R L  KR++  + RA TR GC AM++++K+ +GKWV+TKFVK+HN
Subjt:  EPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDHN

Query:  HPLI
        H L+
Subjt:  HPLI

AT3G59470.2 Far-red impaired responsive (FAR1) family protein1.2e-2652.88Show/hide
Query:  EPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDHN
        EPYVG EFE E +A  FY+ YA++ GF++RV    RS  +G+ + R+LVCNKEG+R L  KR++  + RA TR GC AM++++K+ +GKWV+TKFVK+HN
Subjt:  EPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVVTKFVKDHN

Query:  HPLI
        H L+
Subjt:  HPLI

AT4G38180.1 FAR1-related sequence 51.1e-2751.75Show/hide
Query:  ATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENR---KARAVTREGCMAMVVVKKDKTGKW
        A  +LD EPY G+EFE EE+AK FY+ YA R GF  RV + RRS  +GA++ R+ VC KEGFR +  KR ++R   + R +TR GC A + VK   +GKW
Subjt:  ATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENR---KARAVTREGCMAMVVVKKDKTGKW

Query:  VVTKFVKDHNHPLI
        +V+ FVKDHNH L+
Subjt:  VVTKFVKDHNHPLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAACCCCCACGGAAACTAAAGCAATAGCGACTAGTATTTTAGATACAGAGCCATATGTAGGTATGGAGTTTGAATTTGAGGAATCTGCTAAAGTTTTCTACGA
TTTATATGCTTCACGATTTGGTTTTATTATGCGCGTTGATGCATTTCGTCGATCGATGTGCAATGGCGCTGTTGTTTGGCGTCGGCTTGTTTGTAATAAGGAAGGGTTTC
GCAAATTGAGGCCTAAAAGAAATGAAAATAGGAAGGCTAGAGCTGTAACAAGAGAAGGGTGCATGGCAATGGTTGTTGTAAAGAAAGACAAGACTGGAAAATGGGTTGTG
ACGAAATTTGTCAAGGATCATAATCATCCATTGATTGTTGCTTCTGCTAGTTCTCGTCGAAATGTTCTCTTTCTCAGACTCGGGATGAGAAAGATGTGA
mRNA sequenceShow/hide mRNA sequence
AATTTATCCAGGCTCAGCTCATTCATGGACGTTCACAGGGTTTAGTTCAAAATTCTCCATTTCAACGATCCCAAATCCTTCTCGATTCACCGGAAAACACCGAAGAAATG
AGATTGAAACCGATGAATTCATTGCGTCAAATCCAATTCAAATAATCAAGAACACAGCGAATCCAAAAAATTGGGGCAAATCAAATGGATGAAACCCCCACGGAAACTAA
AGCAATAGCGACTAGTATTTTAGATACAGAGCCATATGTAGGTATGGAGTTTGAATTTGAGGAATCTGCTAAAGTTTTCTACGATTTATATGCTTCACGATTTGGTTTTA
TTATGCGCGTTGATGCATTTCGTCGATCGATGTGCAATGGCGCTGTTGTTTGGCGTCGGCTTGTTTGTAATAAGGAAGGGTTTCGCAAATTGAGGCCTAAAAGAAATGAA
AATAGGAAGGCTAGAGCTGTAACAAGAGAAGGGTGCATGGCAATGGTTGTTGTAAAGAAAGACAAGACTGGAAAATGGGTTGTGACGAAATTTGTCAAGGATCATAATCA
TCCATTGATTGTTGCTTCTGCTAGTTCTCGTCGAAATGTTCTCTTTCTCAGACTCGGGATGAGAAAGATGTGAAAATTCGAGAATTAACTGCCGAGCTACAGCGAGAACG
AAGGCGCTGCACAGCTTATCAAGAACAGCTTGCCATGGTCTTGAGAGACATTGAGGAACACTCAAATCATCTAGCAAGAAACATAGATGACATTGTTAAATGTGTGAAAG
ATATTGAATCAAAAGACAATTCATTTTCAAATACCTAACTACAGAATACAAAGATGAAATATAGTTGTTTTTTGTAAAAAATATTATATAGTAACTGTTTATAATAGTTC
AGACTTAAACTTGTTTATTAGTGATCCCATTTTCTCTCCTGTTTGTCTGGGTTGCTTGTTGCCATAAATTTATATTCCTCTCCAGCCATAAATTCC
Protein sequenceShow/hide protein sequence
MDETPTETKAIATSILDTEPYVGMEFEFEESAKVFYDLYASRFGFIMRVDAFRRSMCNGAVVWRRLVCNKEGFRKLRPKRNENRKARAVTREGCMAMVVVKKDKTGKWVV
TKFVKDHNHPLIVASASSRRNVLFLRLGMRKM